Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,003,330 G→A 100% L371L (CTC→CTT ygeV ← DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,003,3300G→A100.0% 1105.9 274L371L (CTC→CTTygeVDNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  new base (140/134):  ref base (0/0):  total (140/134)

Only 100 of 284 total aligned reads displayed.

TGTATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCGAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGTTCGC  >  NC_007779/3003232‑3003427
                                                                                                  |                                                                                                 
tGTATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTTTTTCATCaag                                                                                                 <  1:566570/101‑1 (MQ=255)
tGTATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCaag                                                                                                 >  1:10707286/1‑101 (MQ=255)
  tATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCTCCTATTTCATCAAGaa                                                                                               >  1:5871793/1‑101 (MQ=255)
  tATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGaa                                                                                               >  1:14190336/1‑101 (MQ=255)
  tATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGaa                                                                                               <  1:12209149/101‑1 (MQ=255)
   aTTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGaaa                                                                                              >  1:10626028/1‑101 (MQ=255)
    ttGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAAc                                                                                             <  1:13969626/101‑1 (MQ=255)
    ttGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAAc                                                                                             <  1:3126039/101‑1 (MQ=255)
    ttGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAAc                                                                                             >  1:9907163/1‑101 (MQ=255)
     tGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACa                                                                                            >  1:9225902/1‑101 (MQ=255)
      gggCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAg                                                                                           >  1:7968485/1‑101 (MQ=255)
      gggCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAg                                                                                           <  1:7788962/101‑1 (MQ=255)
       ggCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGc                                                                                          <  1:8732884/101‑1 (MQ=255)
        gCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCg                                                                                         <  1:1187691/101‑1 (MQ=255)
         gtACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGt                                                                                        <  1:199282/100‑1 (MQ=255)
         cTACTGGCACCAATCCGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGt                                                                                        <  1:11198097/101‑1 (MQ=255)
          tACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTg                                                                                       <  1:4321343/101‑1 (MQ=255)
          tACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTg                                                                                       >  1:12955201/1‑101 (MQ=255)
            cTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGcc                                                                                     >  1:14372147/1‑101 (MQ=255)
                 aCCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTAt                                                                                <  1:5783650/101‑1 (MQ=255)
                 aCCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTAt                                                                                <  1:5106039/101‑1 (MQ=255)
                  ccAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTAtt                                                                               >  1:14535527/1‑101 (MQ=255)
                   cAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTc                                                                              <  1:6582974/101‑1 (MQ=255)
                    aaTCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTcg                                                                             <  1:1473337/101‑1 (MQ=255)
                      tCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTcgcc                                                                           >  1:3910842/1‑101 (MQ=255)
                      tCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTcgcc                                                                           <  1:9089147/101‑1 (MQ=255)
                           aGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTg                                                                      >  1:12342852/1‑101 (MQ=255)
                             aaTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGaa                                                                    >  1:10821206/1‑101 (MQ=255)
                             aaTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGaa                                                                    <  1:2561748/101‑1 (MQ=255)
                             aaTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGaa                                                                    <  1:8326310/101‑1 (MQ=255)
                              aTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTATGGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAAt                                                                   <  1:10082493/101‑1 (MQ=255)
                              aTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAAt                                                                   <  1:3397417/101‑1 (MQ=255)
                              aTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAAt                                                                   >  1:5057716/1‑101 (MQ=255)
                              aTTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAAt                                                                   <  1:10242800/101‑1 (MQ=255)
                               tttCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATc                                                                  <  1:11255888/101‑1 (MQ=255)
                                ttCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCa                                                                 <  1:11819424/101‑1 (MQ=255)
                                 tCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCaa                                                                >  1:3696883/1‑101 (MQ=255)
                                  cACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAAc                                                               >  1:8617976/1‑101 (MQ=255)
                                      tGCCTCAATAGCGAGCAGTAATTTAGCCTGCAACATTAATGGCATATCACATATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTg                                                           <  1:785535/101‑1 (MQ=255)
                                       gCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGt                                                          >  1:9730571/1‑101 (MQ=255)
                                        ccTCAATAGCGAGGAGTAATTTAGCCTGCAAGATTAATGGCATATCACATATTTCATCAAGAAACAACGTGCCCGGATTCGCCGCCTGAATCAACCCTGtt                                                         <  1:7332043/101‑1 (MQ=255)
                                          tCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGtttt                                                       >  1:5291501/1‑101 (MQ=255)
                                          tCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGtttt                                                       <  1:12278123/101‑1 (MQ=255)
                                           cAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGttttc                                                      >  1:13167801/1‑100 (MQ=255)
                                            aaTAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTAc                                                     >  1:3442739/1‑101 (MQ=255)
                                             aTAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTAcc                                                    >  1:4463897/1‑101 (MQ=255)
                                               aGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGt                                                  <  1:11393203/101‑1 (MQ=255)
                                                 cgcgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTg                                                >  1:7558549/1‑101 (MQ=255)
                                                 cgcgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTg                                                <  1:9622657/101‑1 (MQ=255)
                                                  gcgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTgg                                               <  1:4991269/101‑1 (MQ=255)
                                                  gcgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTgg                                               >  1:13831422/1‑101 (MQ=255)
                                                  gcgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTgc                                               >  1:6957987/1‑100 (MQ=255)
                                                   cgcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGc                                              <  1:298851/101‑1 (MQ=255)
                                                    gcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCa                                             <  1:823149/101‑1 (MQ=255)
                                                    gcAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCACCGCCTGAATCAACCCTGTTTTACCGTTGGCa                                             >  1:13360412/1‑101 (MQ=255)
                                                      aGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGa                                           <  1:1640985/101‑1 (MQ=255)
                                                      aGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGa                                           >  1:2314919/1‑101 (MQ=255)
                                                      aGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGa                                           >  1:7131301/1‑101 (MQ=255)
                                                      aGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGa                                           <  1:469422/101‑1 (MQ=255)
                                                       gTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGaa                                          <  1:11063624/101‑1 (MQ=255)
                                                         aaTTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAgc                                        <  1:3269651/101‑1 (MQ=255)
                                                          aTTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAgcg                                       >  1:3499366/1‑101 (MQ=255)
                                                          aTTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAgcg                                       <  1:12143260/101‑1 (MQ=255)
                                                             tAGCCTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCa                                    >  1:6622541/1‑101 (MQ=255)
                                                               ggcTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGt                                  <  1:2009267/99‑1 (MQ=255)
                                                                ccTGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTa                                 <  1:3188871/101‑1 (MQ=255)
                                                                  tGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTaaa                               >  1:244804/1‑101 (MQ=255)
                                                                  tGCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTaaa                               >  1:11703761/1‑101 (MQ=255)
                                                                   gCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAAt                              <  1:7218493/101‑1 (MQ=255)
                                                                   gCAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAAt                              <  1:2622601/101‑1 (MQ=255)
                                                                    cAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATg                             >  1:2157949/1‑101 (MQ=255)
                                                                    cAACATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATg                             <  1:12672891/101‑1 (MQ=255)
                                                                     aaCATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGc                            >  1:5365918/1‑101 (MQ=255)
                                                                     aaCATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGc                            >  1:12015285/1‑101 (MQ=255)
                                                                       cATTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCAc                          <  1:6211515/101‑1 (MQ=255)
                                                                        aTTAATGGCATATGACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCAcc                         <  1:9851506/101‑1 (MQ=255)
                                                                        aTTAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCAcc                         >  1:6778725/1‑101 (MQ=255)
                                                                          tAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCtt                       >  1:2824867/1‑101 (MQ=255)
                                                                          tAATGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCtt                       <  1:9359690/101‑1 (MQ=255)
                                                                           aaTGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCttt                      >  1:14946054/1‑101 (MQ=255)
                                                                           aaTGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCttt                      >  1:12445629/1‑101 (MQ=255)
                                                                           aaTGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCttt                      >  1:6136788/1‑101 (MQ=255)
                                                                            aTGGCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTa                     <  1:2776002/101‑1 (MQ=255)
                                                                               gCATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACa                  >  1:5231669/1‑101 (MQ=255)
                                                                                cATATCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACAt                 <  1:8867357/101‑1 (MQ=255)
                                                                                 atatCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATa                <  1:11020940/101‑1 (MQ=255)
                                                                                  tatCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATaa               <  1:6409441/101‑1 (MQ=255)
                                                                                    tcgccTATTTCAGCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAAcc             <  1:11530911/98‑1 (MQ=255)
                                                                                    tCACCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAAcc             <  1:8044412/101‑1 (MQ=255)
                                                                                      aCCTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGa           <  1:11650833/101‑1 (MQ=255)
                                                                                       ccTATTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGaa          <  1:13581490/101‑1 (MQ=255)
                                                                                          aTTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAg       >  1:5835182/1‑101 (MQ=255)
                                                                                          aTTTCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAAAAGCGCCAGTAAAGGAACCTTTAAAATACCAGAACAg       >  1:6265290/1‑101 (MQ=255)
                                                                                           tttCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGt      >  1:4118425/1‑101 (MQ=255)
                                                                                            ttCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACCTAACCGAACAGtt     <  1:12586043/101‑1 (MQ=255)
                                                                                            ttCATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGtt     >  1:9169822/1‑101 (MQ=255)
                                                                                              cATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGTTCg   >  1:10522140/1‑101 (MQ=255)
                                                                                              cATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGTTCg   >  1:7382404/1‑101 (MQ=255)
                                                                                              cATCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGAACCTTTAACATAACCGAACAGTTCg   >  1:14326295/1‑101 (MQ=255)
                                                                                               aTCAAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGTTCGc  <  1:4352730/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TGTATTGGGCTACTGGCACCAATCGGCAGAATTTCACGTGCCTCAATAGCGCGCAGTAATTTAGCCTGCAACATTAATGGCATATCACCTATTTCATCGAGAAACAGCGTGCCCGTATTCGCCGCCTGAATCAACCCTGTTTTACCGTTGGCAGAAGCGCCAGTAAATGCACCTTTAACATAACCGAACAGTTCGC  >  NC_007779/3003232‑3003427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.