Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 569,996 G→C 100% intergenic (+345/‑120) ybcK → / → ybcL recombinase/kinase inhibitor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_007779569,9960G→C100.0% 1322.1 309intergenic (+345/‑120)ybcK/ybcLrecombinase/kinase inhibitor
Reads supporting (aligned to +/- strand):  new base (157/151):  ref base (0/0):  total (158/151)

Only 100 of 309 total aligned reads displayed.

TTGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGGCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAT  >  NC_007779/569898‑570093
                                                                                                  |                                                                                                 
ttGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCa                                                                                                 <  1:6970759/101‑1 (MQ=255)
  gAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCaaa                                                                                               <  1:14211831/101‑1 (MQ=255)
  gAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCaaa                                                                                               >  1:11547486/1‑101 (MQ=255)
   aaTGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaat                                                                                              >  1:2088254/1‑101 (MQ=255)
    aTGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCAAaata                                                                                             >  1:4061789/1‑101 (MQ=255)
     tGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaataa                                                                                            <  1:8400335/101‑1 (MQ=255)
     tGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaataa                                                                                            >  1:464973/1‑101 (MQ=255)
          ggTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttggg                                                                                       <  1:13386837/101‑1 (MQ=255)
          ggTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttggg                                                                                       >  1:12011096/1‑101 (MQ=255)
           gTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggt                                                                                      <  1:5119263/101‑1 (MQ=255)
           gTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggt                                                                                      >  1:982789/1‑101 (MQ=255)
            ttAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggtt                                                                                     <  1:14886147/101‑1 (MQ=255)
               aaaaaTAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggttggg                                                                                  >  1:10912963/1‑101 (MQ=255)
                aaaaTAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTgggg                                                                                 >  1:7925456/1‑101 (MQ=255)
                  aaTAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGt                                                                               >  1:5409546/1‑101 (MQ=255)
                  aaTAACACCGACTCTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTggggga                                                                               >  1:490069/1‑100 (MQ=255)
                    tAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTAc                                                                             >  1:8313538/1‑101 (MQ=255)
                     aaCACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGATTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACa                                                                            >  1:13323752/1‑101 (MQ=255)
                        acCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAAtt                                                                         >  1:1115852/1‑101 (MQ=255)
                         ccGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATtg                                                                        <  1:1606831/101‑1 (MQ=255)
                           gACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATtgtg                                                                      <  1:7028038/101‑1 (MQ=255)
                             cTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAt                                                                    <  1:6747702/101‑1 (MQ=255)
                             cTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAt                                                                    >  1:9254516/1‑101 (MQ=255)
                             cTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAt                                                                    >  1:13653637/1‑101 (MQ=255)
                               ttCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTg                                                                  >  1:5070487/1‑101 (MQ=255)
                                 cGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCt                                                                >  1:4239217/1‑101 (MQ=255)
                                 cGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCt                                                                >  1:11369068/1‑101 (MQ=255)
                                  gTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtt                                                               >  1:3517311/1‑101 (MQ=255)
                                  gTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtt                                                               <  1:5179513/101‑1 (MQ=255)
                                    aGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtttt                                                             <  1:75615/101‑1 (MQ=255)
                                    aGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtttt                                                             <  1:12753484/101‑1 (MQ=255)
                                    aGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtttt                                                             <  1:12041562/101‑1 (MQ=255)
                                        gtTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCAt                                                         >  1:14341879/1‑101 (MQ=255)
                                        gtTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCAt                                                         <  1:10063399/101‑1 (MQ=255)
                                        gtTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCAt                                                         >  1:13578526/1‑101 (MQ=255)
                                         ttACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATg                                                        >  1:5331623/1‑101 (MQ=255)
                                          tACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGa                                                       >  1:1505295/1‑101 (MQ=255)
                                          tACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGa                                                       >  1:1739283/1‑101 (MQ=255)
                                          tACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGa                                                       >  1:4529469/1‑101 (MQ=255)
                                            cTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAAc                                                     <  1:14684633/101‑1 (MQ=255)
                                            cTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAAc                                                     <  1:13794289/101‑1 (MQ=255)
                                             taataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACa                                                    >  1:8239099/1‑101 (MQ=255)
                                               ataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACAtt                                                  >  1:2598641/1‑101 (MQ=255)
                                                taataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTg                                                 <  1:8053558/101‑1 (MQ=255)
                                                taataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTg                                                 >  1:7851079/1‑101 (MQ=255)
                                                 aataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgc                                                >  1:8738823/1‑101 (MQ=255)
                                                   taaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgcgc                                              >  1:13112266/1‑101 (MQ=255)
                                                   taaAGCAGAGTTTTTAGATAGTATCAATGTGCTATGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgcgc                                              <  1:2902469/101‑1 (MQ=255)
                                                      aGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCtt                                           >  1:10659592/1‑101 (MQ=255)
                                                      aGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCtt                                           >  1:10172356/1‑101 (MQ=255)
                                                         agagTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTAt                                        >  1:3339186/1‑101 (MQ=255)
                                                          gagTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATg                                       <  1:4017938/101‑1 (MQ=255)
                                                          gagTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATg                                       <  1:6148710/101‑1 (MQ=255)
                                                          gagTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATg                                       >  1:10760608/1‑101 (MQ=255)
                                                             tttttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCAt                                    <  1:12336724/101‑1 (MQ=255)
                                                             tttttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCAt                                    <  1:6621021/101‑1 (MQ=255)
                                                             tttttAGATAGTATCAATGTGCTTTGTGTATATTGTACCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGctt                                    <  1:9048198/101‑3 (MQ=255)
                                                              ttttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATa                                   <  1:7129971/101‑1 (MQ=255)
                                                               tttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATaa                                  >  1:6494526/1‑101 (MQ=255)
                                                                ttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAAt                                 <  1:1956582/101‑1 (MQ=255)
                                                                ttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAAt                                 <  1:11448920/101‑1 (MQ=255)
                                                                ttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAAt                                 <  1:2677253/101‑1 (MQ=255)
                                                                ttAGATAGTATCAATGTCCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAAt                                 <  1:8112800/101‑1 (MQ=255)
                                                                 tAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATg                                >  1:13489548/1‑101 (MQ=255)
                                                                  aGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATga                               <  1:8577754/101‑1 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             >  1:10437938/1‑101 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             >  1:3757014/1‑101 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             >  1:11292907/1‑101 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGACAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             >  1:10238878/1‑101 (MQ=255)
                                                                     tAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGAt                            >  1:3294525/1‑101 (MQ=255)
                                                                      aGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATa                           <  1:12439075/101‑1 (MQ=255)
                                                                       gTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATaa                          >  1:3637585/1‑101 (MQ=255)
                                                                        tATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATaaa                         <  1:14809660/101‑1 (MQ=255)
                                                                           cAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGa                      <  1:7954941/101‑1 (MQ=255)
                                                                           cAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGa                      <  1:9362195/101‑1 (MQ=255)
                                                                              tgtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAata                   <  1:9602881/101‑1 (MQ=255)
                                                                              tgtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAata                   <  1:9188190/101‑1 (MQ=255)
                                                                              tgtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAata                   >  1:7491037/1‑101 (MQ=255)
                                                                               gtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAatat                  <  1:9000147/101‑1 (MQ=255)
                                                                               gtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGAAatat                  >  1:3163861/1‑101 (MQ=255)
                                                                                tgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATc                 <  1:2392758/101‑1 (MQ=255)
                                                                                tgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATc                 <  1:13723198/101‑1 (MQ=255)
                                                                                 gCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCa                >  1:4132884/1‑101 (MQ=255)
                                                                                 gCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCa                >  1:2135986/1‑101 (MQ=255)
                                                                                   tttGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaa              <  1:11694190/101‑1 (MQ=255)
                                                                                   tttGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaa              >  1:11975495/1‑101 (MQ=255)
                                                                                   tttGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaa              >  1:1406177/1‑101 (MQ=255)
                                                                                     tgtgTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaata            <  1:7230083/101‑1 (MQ=255)
                                                                                     tgtgTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaata            >  1:1363225/1‑101 (MQ=255)
                                                                                         tataTTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaat        <  1:1408266/101‑1 (MQ=255)
                                                                                         tataTTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaat        <  1:8697693/101‑1 (MQ=255)
                                                                                         tataTTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTATGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaactaaaat        <  1:12710078/101‑1 (MQ=255)
                                                                                          atatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaata       <  1:4840372/101‑1 (MQ=255)
                                                                                           tatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAaataaaataa      >  1:3021582/1‑101 (MQ=255)
                                                                                           tatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAaataaaataa      >  1:5741219/1‑101 (MQ=255)
                                                                                             ttGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACg    >  1:1394672/1‑101 (MQ=255)
                                                                                              tgtgCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGa   <  1:7710676/101‑1 (MQ=255)
                                                                                              tgtgCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGa   <  1:13268943/101‑1 (MQ=255)
                                                                                              tgtgCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGa   >  1:3792269/1‑101 (MQ=255)
                                                                                               gtgCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAt  <  1:969477/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TTGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGGCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAT  >  NC_007779/569898‑570093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.