| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,315,756 | T→C | 2.6% | intergenic (‑98/+29) | alsA ← / ← alsB | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily/D‑allose transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,315,756 | 0 | T→C | 2.6% | 44.1 ‑0.7 ‑0.3 | 815 | intergenic (‑98/+29) | alsA/alsB | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily/D‑allose transporter subunit |
| Reads supporting (aligned to +/- strand): new base (11/10): ref base (350/443): total (362/453) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.08e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.49e-01 | ||||||||||
Only 100 of 955 total aligned reads displayed.
CATAAATAACCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGA > NC_007779/4315656‑4315856 | tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 1:13445622‑M2/1‑1 (MQ=255)tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 1:7049751‑M2/1‑1 (MQ=255)tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct > 1:3432174‑M2/101‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:8481522‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:8051302‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:13285279‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:14222151‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 1:14488682‑M2/2‑1 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:6347421‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgtactatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 1:9799243‑M2/2‑1 (MQ=255) taaataaCCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTa < 1:11794660/101‑1 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:13688531‑M2/3‑1 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa > 1:11507923‑M2/99‑101 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa > 1:4601156‑M2/99‑101 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:13976036‑M2/3‑1 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctagggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa > 1:11662231‑M2/99‑101 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:5196971‑M2/98‑101 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 1:359431‑M2/4‑1 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 1:14113188‑M2/4‑1 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 1:7492988‑M2/4‑1 (MQ=255) aaataaCCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAg > 1:499685/1‑101 (MQ=255) tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGc > 1:2433617‑M2/97‑101 (MQ=255) tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGc > 1:7953478‑M2/97‑101 (MQ=255) aaTAACCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGg < 1:9360208‑M2/101‑2 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGca > 1:7292106‑M2/96‑101 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGca > 1:12961360‑M2/96‑101 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGca > 1:5930610‑M2/96‑101 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTagcaaa > 1:2084975‑M2/94‑99 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcacctttcCTAGcgtcatc < 1:10001281‑M2/11‑1 (MQ=255) ctctGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGcatcatcat > 1:13768894/1‑101 (MQ=255) ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCtagcgtcatcagaa > 1:10783990‑M2/87‑98 (MQ=255) ctGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATcc > 1:179923/1‑101 (MQ=255) tGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCg > 1:8656064/1‑101 (MQ=255) ggCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCg > 1:12541841/2‑101 (MQ=255) aCGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGca < 1:9467448/101‑1 (MQ=255) aCGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGca < 1:11913112/101‑1 (MQ=255) aCGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGca < 1:3783695/101‑1 (MQ=255) cGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGcat < 1:11018649/101‑1 (MQ=255) ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGcatc < 1:14393352‑M2/21‑1 (MQ=255) gAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGcatc < 1:5793614/101‑1 (MQ=255) atatCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCAtt < 1:12660340/101‑1 (MQ=255) atatCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCAtt > 1:3318774/1‑101 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCa > 1:11372852‑M2/76‑101 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCa < 1:3662350‑M2/26‑1 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCa > 1:1215538‑M2/76‑101 (MQ=255) gTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGtt < 1:9615408/101‑1 (MQ=255) ttattGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTa < 1:1109432/101‑1 (MQ=255) tattGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTAt > 1:4750567/1‑101 (MQ=255) tattGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTAt < 1:2574370/101‑1 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTAt > 1:9231329‑M2/69‑101 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTAt < 1:6929330‑M2/33‑1 (MQ=255) ttGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGggaaggtgcgaataagcggggaaattcttct > 1:14939996‑M2/1‑70 (MQ=255) atGCCTGATGGCTTCACTTAACAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTg < 1:6573401/100‑1 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGa < 1:13043018‑M2/36‑1 (MQ=255) ccTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGt < 1:2270787/101‑1 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTg > 1:1714868‑M2/63‑101 (MQ=255) cTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTg > 1:7603549/1‑101 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAc > 1:9070057‑M2/61‑101 (MQ=255) aTGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAcc < 1:3214551/101‑1 (MQ=255) tGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCa < 1:1607361/101‑1 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCa < 1:8778653‑M2/43‑1 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAg > 1:13251176‑M2/58‑101 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAg < 1:3109881‑M2/44‑1 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAgg > 1:6787369‑M2/57‑101 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGa > 1:717694‑M2/56‑101 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGa < 1:5145723‑M2/46‑1 (MQ=255) cATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTg < 1:10645243/101‑1 (MQ=255) aTTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGa > 1:6059060/1‑101 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAAt > 1:4420754‑M2/50‑101 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGAc > 1:11989577‑M2/46‑101 (MQ=255) acaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGtt < 1:8416732‑M2/61‑1 (MQ=255) tACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGttt > 1:4857000/1‑101 (MQ=255) tACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGttt > 1:285657/1‑101 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGttt > 1:6257821‑M2/40‑101 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTaa > 1:11214100‑M2/38‑101 (MQ=255) gatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTcc > 1:8198558‑M2/33‑101 (MQ=255) atctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCg > 1:14719851‑M2/32‑101 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCgg < 1:13883440‑M2/71‑1 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCgg > 1:4107510‑M2/31‑101 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTg < 1:5590381‑M2/73‑1 (MQ=255) aTTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGc > 1:10227421/1‑101 (MQ=255) ttttGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCt < 1:5679822/101‑1 (MQ=255) atatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCt > 1:8924078‑M2/27‑101 (MQ=255) atcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCttt < 1:3945181‑M2/77‑1 (MQ=255) tcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTa < 1:14992068‑M2/78‑1 (MQ=255) agggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATc > 1:6662712‑M2/22‑101 (MQ=255) cttgttcgccccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCg < 1:19452‑M2/85‑1 (MQ=255) ttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGAt < 1:6496892‑M2/89‑1 (MQ=255) ttcgcaccttccTTAGCATCATAATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGAt > 1:7750603‑M2/13‑101 (MQ=255) tcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATa < 1:1279414‑M2/90‑1 (MQ=255) tcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCAACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATa > 1:1050418‑M2/12‑101 (MQ=255) aaGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTGTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATa < 1:10862571/101‑1 (MQ=255) cgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGGGGGATaa < 1:2973842‑M2/91‑1 (MQ=255) ccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCtt < 1:10271272‑M2/95‑1 (MQ=255) acTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCtt > 1:14622205/1‑101 (MQ=255) cttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTg < 1:5341169‑M2/96‑1 (MQ=255) cttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTg < 1:12311511‑M2/96‑1 (MQ=255) ccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCg < 1:2728956‑M2/99‑1 (MQ=255) cATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCg > 1:4249905/1‑101 (MQ=255) ttAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGa < 1:10118430/101‑1 (MQ=255) | CATAAATAACCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGA > NC_007779/4315656‑4315856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |