New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 13010400 (0.000)167 (0.860) 107/166 NT 100% intergenic (+218/‑90) ychE/insC inner membrane protein/IS2 element protein
?NC_007779 1302377 = 0 (0.000)intergenic (+19/‑519) insD/oppA IS2 element protein/oligopeptide transporter subunit

Only 100 of 197 total aligned reads displayed.

CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAT  >  NC_007779/1302278‑1302477
                                                                                                    |                                                                                                    
gttagttataaggatttccttaacttcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattat                                                                                                      <  1:674059‑M2/1‑1 (MQ=255)
attagttataaggatttccttaactgcttctcctcaccatcatggtattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattat                                                                                                      <  1:4248965‑M2/1‑1 (MQ=255)
 ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattatt                                                                                                     <  1:6293869‑M2/2‑1 (MQ=255)
  tagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattatta                                                                                                    <  1:3884452‑M2/3‑1 (MQ=255)
  tagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattatta                                                                                                    <  1:7552952‑M2/3‑1 (MQ=255)
   agttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTaa                                                                                                   >  1:352626‑M2/98‑101 (MQ=255)
    gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAAt                                                                                                  <  1:8473655‑M2/5‑1 (MQ=255)
     ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAAtt                                                                                                 >  1:5918968‑M2/96‑101 (MQ=255)
      tataaggatttccttaactgctactcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTc                                                                                                >  1:9740123‑M2/95‑101 (MQ=255)
       ataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTcc                                                                                               <  1:601462‑M2/8‑1 (MQ=255)
       ataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTcc                                                                                               >  1:6316920‑M2/94‑101 (MQ=255)
       ataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTcc                                                                                               >  1:3509646‑M2/94‑101 (MQ=255)
       aTCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTATGGGGTTAGGGGTAACAGGTTGCTGGGAATAATAGGGGAAAATCCAATTAttaatatgacaa                                                                                              >  1:3081468/1‑95 (MQ=2)
         aaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCAc                                                                                             >  1:4470375‑M2/92‑101 (MQ=255)
          aggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACt                                                                                            <  1:3234730‑M2/11‑1 (MQ=255)
          aggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACt                                                                                            >  1:9723401‑M2/91‑101 (MQ=255)
           ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTg                                                                                           >  1:1824041‑M2/90‑101 (MQ=255)
           ggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTg                                                                                           <  1:7088981‑M2/12‑1 (MQ=255)
             atttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGcc                                                                                         >  1:8361280‑M2/88‑101 (MQ=255)
              tttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCt                                                                                        >  1:8322696‑M2/87‑101 (MQ=255)
               ttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCtt                                                                                       >  1:6672901‑M2/86‑101 (MQ=255)
                tccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCttt                                                                                      <  1:9908889‑M2/17‑1 (MQ=255)
                tccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCttt                                                                                      <  1:5990296‑M2/17‑1 (MQ=255)
                tccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCttt                                                                                      <  1:6616900‑M2/17‑1 (MQ=255)
                 ccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTg                                                                                     >  1:3650814‑M2/84‑101 (MQ=255)
                  cttaactgcttctcctcaccatcatgttattttcgccacatcataagcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTgg                                                                                    >  1:6589431‑M2/83‑101 (MQ=255)
                   ttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGt                                                                                   >  1:4072693‑M2/82‑101 (MQ=255)
                   ttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGt                                                                                   >  1:3363586‑M2/82‑101 (MQ=255)
                    taactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTa                                                                                  >  1:1093008‑M2/81‑101 (MQ=255)
                    taactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTa                                                                                  >  1:10742182‑M2/81‑101 (MQ=255)
                     aactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTag                                                                                 <  1:8358712‑M2/22‑1 (MQ=255)
                      actgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTaga                                                                                <  1:4182887‑M2/23‑1 (MQ=255)
                      actgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTaga                                                                                >  1:1919333‑M2/79‑101 (MQ=255)
                        tgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAgg                                                                              <  1:7243866‑M2/25‑1 (MQ=255)
                          cttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaa                                                                            <  1:940410‑M2/27‑1 (MQ=255)
                           ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaaa                                                                           >  1:3513221‑M2/74‑101 (MQ=255)
                           ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaaa                                                                           <  1:320459‑M2/28‑1 (MQ=255)
                           ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaaa                                                                           <  1:8592198‑M2/28‑1 (MQ=255)
                           ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaaa                                                                           >  1:6800267‑M2/74‑101 (MQ=255)
                           ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGaaa                                                                           <  1:7134593‑M2/28‑1 (MQ=255)
                              tcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTg                                                                        >  1:9024535‑M2/71‑101 (MQ=255)
                               cctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGc                                                                       >  1:5343529‑M2/70‑101 (MQ=255)
                               cctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGc                                                                       <  1:4826966‑M2/32‑1 (MQ=255)
                               cctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGc                                                                       <  1:5627676‑M2/32‑1 (MQ=255)
                                ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCt                                                                      >  1:718120‑M2/69‑101 (MQ=255)
                                ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCt                                                                      <  1:6070272‑M2/33‑1 (MQ=255)
                                 tcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTa                                                                     >  1:7417784‑M2/68‑101 (MQ=255)
                                  caccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTaa                                                                    >  1:4637266‑M2/67‑101 (MQ=255)
                                  caccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTaa                                                                    >  1:3433789‑M2/67‑101 (MQ=255)
                                     catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAaata                                                                 <  1:9291980‑M2/38‑1 (MQ=255)
                                       tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAaataat                                                               >  1:1179084‑M2/62‑101 (MQ=255)
                                        catgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAaataata                                                              >  1:1263684‑M2/61‑101 (MQ=255)
                                          tgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAaataataat                                                            >  1:1014616‑M2/59‑101 (MQ=255)
                                           gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATc                                                           >  1:9943717‑M2/58‑101 (MQ=255)
                                           gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATc                                                           <  1:5488620‑M2/44‑1 (MQ=255)
                                            ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCa                                                          <  1:7587647‑M2/45‑1 (MQ=255)
                                              attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAAt                                                        >  1:11402‑M2/55‑101 (MQ=255)
                                               ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAAtt                                                       >  1:8860030‑M2/54‑101 (MQ=255)
                                               ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAAtt                                                       >  1:7677522‑M2/54‑101 (MQ=255)
                                                tttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTg                                                      >  1:2111642‑M2/53‑101 (MQ=255)
                                                    gccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTaa                                                  <  1:2400794‑M2/53‑1 (MQ=255)
                                                    gccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTaa                                                  >  1:7389927‑M2/49‑101 (MQ=255)
                                                     ccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTaaa                                                 <  1:10183733‑M2/54‑1 (MQ=255)
                                                     ccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTaaa                                                 >  1:6190134‑M2/48‑101 (MQ=255)
                                                     ccacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTaaa                                                 <  1:2465595‑M2/54‑1 (MQ=255)
                                                      cacatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAat                                                >  1:1077929‑M2/47‑101 (MQ=255)
                                                       acatcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAatt                                               <  1:4939296‑M2/56‑1 (MQ=255)
                                                         atcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAattat                                             <  1:570658‑M2/58‑1 (MQ=255)
                                                          tcataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAattatt                                            <  1:7885708‑M2/59‑1 (MQ=255)
                                                           cataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATtg                                           <  1:8642931‑M2/60‑1 (MQ=255)
                                                            ataatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATtgt                                          >  1:8877742‑M2/41‑101 (MQ=255)
                                                              aatcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGc                                        >  1:103749‑M2/39‑101 (MQ=255)
                                                               atcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCa                                       >  1:2985416‑M2/38‑101 (MQ=255)
                                                                tcctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCAt                                      >  1:5658793‑M2/37‑101 (MQ=255)
                                                                 cctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCAtt                                     >  1:7914841‑M2/36‑101 (MQ=255)
                                                                  ctgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCAttt                                    <  1:2812047‑M2/67‑1 (MQ=255)
                                                                   tgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTc                                   <  1:5091415‑M2/68‑1 (MQ=255)
                                                                   tgggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTc                                   >  1:2285132‑M2/34‑101 (MQ=255)
                                                                     ggcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCac                                 >  1:8198582‑M2/32‑101 (MQ=255)
                                                                      gcttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCact                                >  1:1419699‑M2/31‑101 (MQ=255)
                                                                       cttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCacta                               <  1:2910367‑M2/72‑1 (MQ=255)
                                                                        ttgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactac                              >  1:10698132‑M2/29‑101 (MQ=255)
                                                                         tgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactact                             <  1:10130642‑M2/74‑1 (MQ=255)
                                                                         tgctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCactact                             >  1:2600494‑M2/28‑101 (MQ=255)
                                                                          gctgaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                            <  1:4069794‑M2/75‑1 (MQ=255)
                                                                             gaagaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                         >  1:6438419‑M2/24‑101 (MQ=255)
                                                                               agaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                       <  1:5143000‑M2/80‑1 (MQ=255)
                                                                               agaataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                       <  1:9531622‑M2/80‑1 (MQ=255)
                                                                                  ataattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                    <  1:4967870‑M2/83‑1 (MQ=255)
                                                                                   taattgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                   >  1:8264577‑M2/18‑101 (MQ=255)
                                                                                     attgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                 >  1:4552050‑M2/16‑101 (MQ=255)
                                                                                     attgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                 >  1:10513961‑M2/16‑101 (MQ=255)
                                                                                      ttgaaatgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                >  1:3180867‑M2/15‑101 (MQ=255)
                                                                                           atgatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa           <  1:10619612‑M2/92‑1 (MQ=255)
                                                                                             gatattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa         <  1:6903511‑M2/94‑1 (MQ=255)
                                                                                              atattaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAt        <  1:1059916‑M2/95‑1 (MQ=255)
                                                                                                attaTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg      <  1:2664547‑M2/97‑1 (MQ=255)
                                                                                                   aTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa   >  1:9347387‑M2/2‑101 (MQ=255)
                                                                                                   aTTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACa   >  1:9636932‑M2/2‑101 (MQ=255)
                                                                                                    ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAt  >  1:2849349/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACAT  >  NC_007779/1302278‑1302477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.