New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2178209 =0 (0.000)261 (0.860) 122/180 NT 100% intergenic (+178/+184) insH/gatZ IS5 element protein/D‑tagatose 1,6‑bisphosphate aldolase 2, subunit
?NC_007779 = 2412225 NA (NA)intergenic (‑55/‑782) insA/yfbQ IS1 element protein/aminotransferase

Only 100 of 281 total aligned reads displayed.

GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATC  >  NC_007779/2178123‑2178309
                                                                                      |                                                                                                    
aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTgctgct                                                                                        <  1:6856231‑M1/15‑1 (MQ=255)
aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTgctgct                                                                                        <  1:3533471‑M1/15‑1 (MQ=255)
aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTgctgct                                                                                        >  1:13811215‑M1/87‑101 (MQ=255)
  gagggacagctgatagaaacagacgccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTCCTGCTCa                                                                                      <  1:2261365‑M1/17‑1 (MQ=255)
  gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCa                                                                                      >  1:7219757‑M1/85‑101 (MQ=255)
   agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCaa                                                                                     >  1:9425356‑M1/84‑101 (MQ=255)
   agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCaa                                                                                     <  1:7411151‑M1/18‑1 (MQ=255)
   agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttcgcagcatcaccCAATAGCGTGCTGCTCaa                                                                                     <  1:9071224‑M1/18‑1 (MQ=255)
       acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAt                                                                                 <  1:8454466‑M1/22‑1 (MQ=255)
       acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAt                                                                                 >  1:4938665‑M1/80‑101 (MQ=255)
        cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAtt                                                                                <  1:6644522‑M1/23‑1 (MQ=255)
         agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTa                                                                               <  1:11960956‑M1/24‑1 (MQ=255)
          gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTAt                                                                              <  1:7455040‑M1/25‑1 (MQ=255)
          gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTAt                                                                              >  1:4333236‑M1/77‑101 (MQ=255)
           ctgatagaaacagaagccactggagcacgtcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATc                                                                             <  1:1178002‑M1/26‑1 (MQ=255)
            tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATcc                                                                            <  1:11683012‑M1/27‑1 (MQ=255)
             gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATccc                                                                           <  1:7685975‑M1/28‑1 (MQ=255)
              atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtcagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCg                                                                          >  1:10491268‑M1/73‑101 (MQ=255)
              atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCg                                                                          <  1:3840036‑M1/29‑1 (MQ=255)
               tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCgg                                                                         <  1:14742244‑M1/30‑1 (MQ=255)
               tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCgg                                                                         <  1:14922103‑M1/30‑1 (MQ=255)
               tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCgg                                                                         <  1:13162760‑M1/30‑1 (MQ=255)
               tagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCgg                                                                         <  1:8004657‑M1/30‑1 (MQ=255)
                  aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg                                                                      <  1:6717178‑M1/33‑1 (MQ=255)
                  aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg                                                                      >  1:12320666‑M1/69‑101 (MQ=255)
                  aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtcggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg                                                                      <  1:11276118‑M1/33‑1 (MQ=255)
                   aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAgg                                                                     >  1:1734057‑M1/68‑101 (MQ=255)
                    acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAggg                                                                    <  1:2165914‑M1/35‑1 (MQ=255)
                    acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAggg                                                                    >  1:6460505‑M1/67‑101 (MQ=255)
                     cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGa                                                                   <  1:13905778‑M1/36‑1 (MQ=255)
                     cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGa                                                                   <  1:4680241‑M1/36‑1 (MQ=255)
                      agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGaa                                                                  <  1:8825569‑M1/37‑1 (MQ=255)
                       gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAt                                                                 >  1:2405363‑M1/64‑101 (MQ=255)
                        aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAtt                                                                <  1:7871343‑M1/39‑1 (MQ=255)
                        aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAtt                                                                >  1:3422314‑M1/63‑101 (MQ=255)
                         agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc                                                               >  1:3095433‑M1/62‑101 (MQ=255)
                         agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc                                                               <  1:2797109‑M1/40‑1 (MQ=255)
                         agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTc                                                               <  1:821889‑M1/40‑1 (MQ=255)
                           ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTg                                                             >  1:8250580‑M1/60‑101 (MQ=255)
                           ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTg                                                             >  1:10076735‑M1/60‑101 (MQ=255)
                            cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGc                                                            <  1:13347991‑M1/43‑1 (MQ=255)
                              ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCtt                                                          >  1:13400508‑M1/57‑101 (MQ=255)
                               tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtc                                                         <  1:4859508‑M1/46‑1 (MQ=255)
                               tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtc                                                         <  1:9780957‑M1/46‑1 (MQ=255)
                               tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtc                                                         <  1:11145605‑M1/46‑1 (MQ=255)
                                ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtct                                                        <  1:2514799‑M1/47‑1 (MQ=255)
                                  agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTctct                                                      >  1:6155577‑M1/53‑101 (MQ=255)
                                  agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTctct                                                      <  1:2133161‑M1/49‑1 (MQ=255)
                                   gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTg                                                     <  1:12303742‑M1/50‑1 (MQ=255)
                                    gcacctcaaaacaccatcatacactaaatcagtaaggtggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTgg                                                    >  1:3820366‑M1/51‑101 (MQ=255)
                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTgg                                                    >  1:2584244‑M1/51‑101 (MQ=255)
                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTgg                                                    <  1:5680928‑M1/51‑1 (MQ=255)
                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCTAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa                                                  <  1:7582745‑M1/53‑1 (MQ=255)
                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa                                                  >  1:369739‑M1/49‑101 (MQ=255)
                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa                                                  >  1:7748746‑M1/49‑101 (MQ=255)
                                      cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCa                                                  >  1:7955652‑M1/49‑101 (MQ=255)
                                       ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCaa                                                 <  1:14603473‑M1/54‑1 (MQ=255)
                                       ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCaa                                                 <  1:13379‑M1/54‑1 (MQ=255)
                                         caaaaacaccatcatacactaaatcagtaggttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAata                                               <  1:2007006‑M1/56‑2 (MQ=255)
                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAAtt                                               <  1:700200‑M1/56‑1 (MQ=255)
                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAAtt                                               >  1:5826986‑M1/46‑101 (MQ=255)
                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAAtt                                               >  1:3956612‑M1/46‑101 (MQ=255)
                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTa                                              <  1:13637628‑M1/57‑1 (MQ=255)
                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTa                                              >  1:3289763‑M1/45‑101 (MQ=255)
                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTa                                              <  1:933821‑M1/57‑1 (MQ=255)
                                           aaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTaa                                             <  1:10733348‑M1/58‑1 (MQ=255)
                                            aaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt                                            <  1:11901584‑M1/59‑1 (MQ=255)
                                            aaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt                                            >  1:14199005‑M1/43‑101 (MQ=255)
                                            aaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt                                            >  1:15197969‑M1/43‑101 (MQ=255)
                                             aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg                                           >  1:9637503‑M1/42‑101 (MQ=255)
                                             aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg                                           <  1:14422373‑M1/60‑1 (MQ=255)
                                             aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTACTCTGGCAATTAATg                                           <  1:11437155‑M1/60‑1 (MQ=255)
                                               caccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGcc                                         <  1:12152009‑M1/62‑1 (MQ=255)
                                                accatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTTTCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt                                        >  1:2886145‑M1/39‑101 (MQ=255)
                                                accatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt                                        <  1:15172269‑M1/63‑1 (MQ=255)
                                                 ccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCtg                                       >  1:15161404‑M1/38‑101 (MQ=255)
                                                  catcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCtgt                                      >  1:13874779‑M1/37‑101 (MQ=255)
                                                    tcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTTCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTgg                                    >  1:12972620‑M1/35‑101 (MQ=255)
                                                       tacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCa                                 >  1:3185994‑M1/32‑101 (MQ=255)
                                                         cactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAgg                               <  1:15025648‑M1/72‑1 (MQ=255)
                                                          actaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGt                              <  1:13598784‑M1/73‑1 (MQ=255)
                                                           ctaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTa                             >  1:5400516‑M1/28‑101 (MQ=255)
                                                            taaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTAt                            >  1:4978390‑M1/27‑101 (MQ=255)
                                                            taaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTAt                            >  1:5378341‑M1/27‑101 (MQ=255)
                                                                tcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATg                        >  1:8924367‑M1/23‑101 (MQ=255)
                                                                tcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATg                        <  1:6072627‑M1/79‑1 (MQ=255)
                                                                 cagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGa                       >  1:1263990‑M1/22‑101 (MQ=255)
                                                                  agtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGaa                      >  1:10892949‑M1/21‑101 (MQ=255)
                                                                  agtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGaa                      >  1:705037‑M1/21‑101 (MQ=255)
                                                                  agtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGaa                      >  1:14013848‑M1/21‑101 (MQ=255)
                                                                     aagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACca                   <  1:682972‑M1/84‑1 (MQ=255)
                                                                      agttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACcac                  >  1:4474405‑M1/17‑101 (MQ=255)
                                                                       gttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACcaca                 <  1:5869513‑M1/86‑1 (MQ=255)
                                                                         tggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACAcc               <  1:10576427‑M1/88‑1 (MQ=255)
                                                                           gcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCtt             >  1:6293711‑M1/12‑101 (MQ=255)
                                                                             agcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTg           <  1:14649997‑M1/92‑1 (MQ=255)
                                                                                atcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCg        >  1:5257012‑M1/7‑101 (MQ=255)
                                                                                   accCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGc     >  1:10674077‑M1/4‑101 (MQ=255)
                                                                                   accCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGc     <  1:1011600‑M1/98‑1 (MQ=255)
                                                                                     cCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAt   >  1:15308135‑M1/2‑101 (MQ=255)
                                                                                      |                                                                                                    
GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATC  >  NC_007779/2178123‑2178309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.