New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 35127592 (0.010)343 (1.140) 152/178 NT 99.4% coding (535/1026 nt) cytR DNA‑binding transcriptional dual regulator
?NC_007779 = 3744262 NA (NA)intergenic (‑90/+31) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator

Only 100 of 925 total aligned reads displayed.

TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859
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tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                      >  1:14718662‑M1/1‑101 (MQ=255)
tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                      <  1:8356734‑M1/101‑1 (MQ=255)
 cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattt                                                                                                     >  1:12847234‑M2/94‑101 (MQ=255)
  tGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTag                                                                                                    <  1:770109‑M1/101‑3 (MQ=255)
  gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                                    <  1:5963933‑M2/9‑1 (MQ=255)
    tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                                  >  1:7544219‑M2/91‑101 (MQ=255)
    ccgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTAATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagac                                                                                                  >  1:12976150‑M1/1‑97 (MQ=255)
        ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgacaacagatgtctggaaatataggggcaaatccAATTATTTATATGAg                                                                                              >  1:13113479‑M2/87‑101 (MQ=255)
         tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                             >  1:14376986‑M2/86‑101 (MQ=255)
         tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                             >  1:10983898‑M2/86‑101 (MQ=255)
         gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                             >  1:5225079‑M1/1‑92 (MQ=255)
           tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttatgtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                           <  1:10274876‑M2/18‑1 (MQ=255)
            cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATGATTTATATGAGCAAg                                                                                          >  1:11450087‑M2/83‑101 (MQ=255)
             gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                         <  1:13636623‑M1/101‑14 (MQ=255)
              tGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctg                                                                                        <  1:4899220‑M1/101‑15 (MQ=255)
                 tGGCGCACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaat                                                                                     <  1:13396836‑M1/101‑18 (MQ=255)
                   cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                                   <  1:8231203‑M2/26‑1 (MQ=255)
                   cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                                   >  1:9290817‑M2/76‑101 (MQ=255)
                   cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                                   >  1:15210957‑M2/76‑101 (MQ=255)
                   cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                                   <  1:14933967‑M2/26‑1 (MQ=255)
                    acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa                                                                                  <  1:8029356‑M2/27‑1 (MQ=255)
                     cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                                 >  1:9685465‑M2/74‑101 (MQ=255)
                      aacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcca                                                                                >  1:4102687‑M1/1‑79 (MQ=255)
                        gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGa                                                                              <  1:3955461‑M2/31‑1 (MQ=255)
                        cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                              <  1:13896612‑M1/101‑25 (MQ=255)
                         gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                             >  1:13206676‑M1/1‑76 (MQ=255)
                         gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                             >  1:12212556‑M1/1‑76 (MQ=255)
                         gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                             >  1:9383526‑M1/1‑76 (MQ=255)
                         aatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGAt                                                                             >  1:12391237‑M2/70‑101 (MQ=255)
                           aTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaa                                                                           <  1:14066448‑M1/101‑28 (MQ=255)
                            tttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaac                                                                          <  1:5535949‑M1/101‑29 (MQ=255)
                            atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                          <  1:2726386‑M2/35‑1 (MQ=255)
                             ttGCACCGGAGCTGGAGCTTCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacc                                                                         <  1:2827201‑M1/101‑30 (MQ=255)
                             ttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacc                                                                         >  1:4680941‑M1/1‑72 (MQ=255)
                               tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTg                                                                       >  1:7005189‑M2/64‑101 (MQ=255)
                                gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGt                                                                      <  1:13493296‑M2/39‑1 (MQ=255)
                                 aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                                     <  1:2051054‑M1/101‑34 (MQ=255)
                                   gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtata                                                                   <  1:974848‑M2/42‑1 (MQ=255)
                                    ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                                  <  1:15014231‑M1/101‑37 (MQ=255)
                                    ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                                  <  1:8831282‑M1/101‑37 (MQ=255)
                                     gagctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcac                                                                 >  1:9562137‑M1/1‑64 (MQ=255)
                                     agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                                 >  1:439164‑M2/58‑101 (MQ=255)
                                       cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               <  1:13746476‑M2/46‑1 (MQ=255)
                                       cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               <  1:10610958‑M2/46‑1 (MQ=255)
                                        gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                              <  1:8516938‑M2/47‑1 (MQ=255)
                                               taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                       >  1:9847587‑M2/48‑101 (MQ=255)
                                                 atgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAaga                                                     <  1:1074329‑M2/56‑1 (MQ=255)
                                                 atgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTCTATAGCCGGTCCCGAaga                                                     >  1:2368897‑M2/46‑101 (MQ=255)
                                                    ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                                  <  1:7384812‑M2/59‑1 (MQ=255)
                                                     gttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                                 >  1:3457939‑M2/42‑101 (MQ=255)
                                                     cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                                 <  1:1836989‑M1/101‑54 (MQ=255)
                                                       taagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGcc                                               <  1:5835937‑M2/62‑1 (MQ=255)
                                                       gTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                               <  1:2594432‑M1/101‑56 (MQ=255)
                                                         tCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                             <  1:11140081‑M1/101‑58 (MQ=255)
                                                         tCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                             <  1:12119281‑M1/101‑58 (MQ=255)
                                                         tCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                             <  1:11368999‑M1/101‑58 (MQ=255)
                                                           atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                           <  1:3356298‑M1/101‑60 (MQ=255)
                                                            gataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgt                                          >  1:7164714‑M2/35‑101 (MQ=255)
                                                               cGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                       <  1:1958258‑M1/101‑64 (MQ=255)
                                                               aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc                                       <  1:10405449‑M2/70‑1 (MQ=255)
                                                                acagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCa                                      >  1:1760499‑M2/31‑101 (MQ=255)
                                                                 aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                                     >  1:1159378‑M1/1‑36 (MQ=255)
                                                                   aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                                   <  1:633538‑M1/101‑68 (MQ=255)
                                                                     tgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAcc                                 <  1:5078630‑M2/76‑1 (MQ=255)
                                                                      cTGACCGCCGCATTTGATGCAGTAAATTATTatactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                <  1:2477628‑M1/101‑71 (MQ=255)
                                                                      cTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                >  1:3612362‑M1/1‑31 (MQ=255)
                                                                      cTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                <  1:6623243‑M1/101‑71 (MQ=255)
                                                                      cTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                <  1:5405277‑M1/101‑71 (MQ=255)
                                                                       tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                               >  1:287726‑M1/1‑30 (MQ=255)
                                                                        gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                              >  1:10512960‑M1/1‑29 (MQ=255)
                                                                        ctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGcc                              <  1:2230852‑M2/79‑1 (MQ=255)
                                                                         tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                             >  1:7776516‑M2/22‑101 (MQ=255)
                                                                           gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc                           <  1:788299‑M2/82‑1 (MQ=255)
                                                                            gccgcATTTGATGCATTAAATTATTagactggccccctgaatctccagacaaccaatatcccttaaataagtgatagtcttaatactagtttttcgactag                          <  1:9093576‑M1/101‑77 (MQ=255)
                                                                             aatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCaa                         <  1:8957211‑M2/84‑1 (MQ=255)
                                                                              cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                        >  1:4531833‑M1/1‑23 (MQ=255)
                                                                              atataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAg                        >  1:3223618‑M2/17‑101 (MQ=255)
                                                                                cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                      >  1:6432361‑M1/1‑21 (MQ=255)
                                                                                   ggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTAt                   >  1:513079‑M2/12‑101 (MQ=255)
                                                                                     gATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag                 >  1:6156124‑M1/1‑16 (MQ=255)
                                                                                       tgcaaatgattattagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa               >  1:14515842‑M1/9‑14 (MQ=255)
                                                                                          caacagtgaatagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag            >  1:10814454‑M1/11‑11 (MQ=255)
                                                                                          aGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag            <  1:125190‑M1/101‑91 (MQ=255)
                                                                                           aatgattattagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga           >  1:14213305‑M1/5‑10 (MQ=255)
                                                                                           aacagtgaatagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga           <  1:6240187‑M1/92‑92 (MQ=255)
                                                                                            tAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat          >  1:11946004‑M1/1‑9 (MQ=255)
                                                                                            acagtgaatagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat          <  1:6875943‑M1/93‑93 (MQ=255)
                                                                                             cagtgaatagactggcgccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatg         <  1:11791218‑M1/94‑94 (MQ=255)
                                                                                             cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc         >  1:10108403‑M2/2‑101 (MQ=255)
                                                                                              gattattagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatga        >  1:14808686‑M1/2‑7 (MQ=255)
                                                                                              AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt        >  1:3051646‑M2/1‑101 (MQ=255)
                                                                                                ttattagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt      >  1:5637089‑M1/1‑5 (MQ=255)
                                                                                                   tttatATGAGCAAGGGCATAAACGGATTCGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTc   >  1:4252381/1‑101 (MQ=255)
                                                                                                   ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat   <  1:13845522‑M1/101‑100 (MQ=255)
                                                                                                   ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat   >  1:8747968‑M1/1‑2 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:1001810‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:1269919‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  <  1:3814112‑M1/101‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:7320691‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattagagaacagatgattgatg  >  1:1556251‑M1/1‑1 (MQ=255)
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TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.