| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3265777 | 0 (0.000) | 407 (1.340) | 169/180 | NT | 100% | coding (107/990 nt) | tdcB | catabolic threonine dehydratase, PLP‑dependent |
| ? | NC_007779 | 3365411 = | NA (NA) | intergenic (+368/+146) | yhcD/insH | outer membrane protein/IS5 transposase and trans‑activator | |||||
Only 100 of 399 total aligned reads displayed.
TGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA > NC_007779/3365311‑3365505 | tGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAgg > 1:2275694/1‑101 (MQ=255)tGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAgg < 1:12286621/101‑1 (MQ=255) gATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAggg > 1:10391363/1‑101 (MQ=255) gATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAggg > 1:14071601/1‑101 (MQ=255) gATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGCTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAggg < 1:10271720/101‑1 (MQ=255) aTCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGa < 1:6751017/101‑1 (MQ=255) gCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAgg > 1:1823622/1‑101 (MQ=255) gCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAgg < 1:5080860/101‑1 (MQ=255) ccAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGt < 1:1573745/101‑1 (MQ=255) ccAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGt < 1:6113397/101‑1 (MQ=255) cAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTg > 1:1713787/1‑101 (MQ=255) aGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGc > 1:12585475/1‑101 (MQ=255) gCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCg < 1:6993064/101‑1 (MQ=255) gCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCg < 1:122154/101‑1 (MQ=255) cGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGa < 1:5698006/101‑1 (MQ=255) cGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGa < 1:13947056/101‑1 (MQ=255) gATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGaa > 1:5566074/1‑101 (MQ=255) tGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAAtg < 1:1916267/101‑2 (MQ=255) tGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATa < 1:1312734/101‑1 (MQ=255) gCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATaa < 1:10907213/101‑1 (MQ=255) gCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATaa < 1:9741354/101‑1 (MQ=255) aTTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGc > 1:10816251/1‑101 (MQ=255) ttttCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑g < 1:10184840/101‑1 (MQ=255) ttttCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGCGCGAATAAGC‑‑g > 1:3245943/1‑101 (MQ=255) tttCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑gg < 1:3487643/101‑1 (MQ=255) ttCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑ggg > 1:587754/1‑101 (MQ=255) cAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGa > 1:8363600/1‑101 (MQ=255) agtaACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttc > 1:12032145/1‑101 (MQ=255) agtaACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttc < 1:11527206/101‑1 (MQ=255) gtaACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttct > 1:2090402/1‑101 (MQ=255) gtaACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttct < 1:5132308/101‑1 (MQ=255) taACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttctt < 1:3048713/101‑1 (MQ=255) taACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttctt < 1:9895722/101‑1 (MQ=255) taACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttctt < 1:13353385/101‑1 (MQ=255) aaCAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttcttc > 1:5471726/1‑101 (MQ=255) aaCAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttcttc < 1:12917590/101‑1 (MQ=255) aaCAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑ttcttc < 1:273195/101‑1 (MQ=255) cAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTtctc > 1:9392533/1‑101 (MQ=255) cAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTtctc < 1:7101794/101‑1 (MQ=255) cAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTtctc > 1:9316936/1‑101 (MQ=255) aaTCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCg < 1:2214043/101‑1 (MQ=255) aTCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCgg < 1:4772772/101‑1 (MQ=255) aTCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCgg < 1:7372234/101‑1 (MQ=255) tctcGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGTAAA‑TTCTTCTCGGc > 1:7920580/1‑101 (MQ=255) tctcGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGc < 1:14687481/101‑1 (MQ=255) ctcGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCt < 1:7229927/101‑1 (MQ=255) ctcGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCt < 1:8223524/101‑1 (MQ=255) cGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGa > 1:11308545/1‑101 (MQ=255) gACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGAc > 1:2670903/1‑101 (MQ=255) aCCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACt < 1:10625552/101‑1 (MQ=255) ccTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTc > 1:9018055/1‑101 (MQ=255) cTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCa > 1:12831496/1‑101 (MQ=255) tGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAg > 1:8909930/1‑101 (MQ=255) ggCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGt < 1:13769678/101‑1 (MQ=255) cGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtca > 1:9634405/1‑101 (MQ=255) aGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtcatttc > 1:2008718/1‑101 (MQ=255) aGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtcatttc > 1:6610646/1‑101 (MQ=255) aGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtcatttc > 1:6192148/1‑101 (MQ=255) cAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtcatttcatt < 1:4317519/101‑1 (MQ=255) cAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGtcatttcatt > 1:10101108/1‑101 (MQ=255) aGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTcatttcattt < 1:14291945/101‑1 (MQ=255) aGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTcatttcattt > 1:11130863/1‑101 (MQ=255) gTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCatttcatttc > 1:13001152/1‑101 (MQ=255) tGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATttct < 1:520323/101‑1 (MQ=255) cAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCa > 1:6932208/1‑101 (MQ=255) cAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCa > 1:953298/1‑101 (MQ=255) aaaaaTGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt > 1:3004935/1‑101 (MQ=255) aaaaTGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATg > 1:3308536/1‑101 (MQ=255) aaaTGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt > 1:5032420/1‑101 (MQ=255) aaTGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt < 1:374825/101‑1 (MQ=255) aaTGACAATCCGGGCAGCACAAGAACAGCATCAATTAGGGAAGGTGCTAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt < 1:5315262/101‑1 (MQ=255) aTGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt > 1:8182177/1‑101 (MQ=255) tGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg < 1:8112025/101‑1 (MQ=255) aCAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg < 1:3649240/101‑1 (MQ=255) cAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc > 1:4198384/1‑101 (MQ=255) aaTCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc > 1:6379520/1‑101 (MQ=255) aTCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg > 1:8717089/1‑101 (MQ=255) ccGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt < 1:15025313/101‑1 (MQ=255) gggCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt < 1:14830301/101‑1 (MQ=255) gggCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt > 1:11761826/1‑101 (MQ=255) cagcaCAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt > 1:11221296/1‑101 (MQ=255) agcaCAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc > 1:12659812/1‑101 (MQ=255) agcaCAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTCCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc < 1:14509177/101‑1 (MQ=255) gcaCAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct > 1:2374374/1‑101 (MQ=255) acaGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc > 1:7511763/1‑101 (MQ=255) caGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc > 1:4957302/1‑101 (MQ=255) ggAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt < 1:780998/101‑1 (MQ=255) ggAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt < 1:13648965/101‑1 (MQ=255) ggAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt > 1:5664030/1‑101 (MQ=255) taaaaaaaaaaTTAGGGAGGGGGCGAAAAAGCGGGGGGAAATTTCTCCCCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg < 1:10019325/92‑1 (MQ=2) aaCAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa > 1:2885295/1‑101 (MQ=40) aaCAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa < 1:4428909/101‑1 (MQ=40) aCAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa < 1:8439908/101‑1 (MQ=40) aCAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa > 1:2613216/1‑101 (MQ=40) cATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc > 1:11403668/1‑101 (MQ=35) tCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 1:12107915/101‑1 (MQ=33) cAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg < 1:11034200/101‑1 (MQ=32) cAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg > 1:413698/1‑101 (MQ=32) aaTTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCCGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa < 1:10568456/101‑1 (MQ=14) aaTTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa < 1:3918225/101‑1 (MQ=31) | TGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGGGAAGGTGCGAATAAGC‑‑GGGGAAA‑TTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA > NC_007779/3365311‑3365505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |