New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3988379NA (NA)347 (1.150) 148/180 NT 100% coding (746/783 nt) yhiS hypothetical protein
?NC_007779 4009199 = 0 (0.000)coding (1375/1623 nt) yhiJ hypothetical protein

Only 100 of 754 total aligned reads displayed.

AACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACA  >  NC_007779/4009099‑4009299
                                                                                                    |                                                                                                    
aaCTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGt                                                                                                      <  1:4364552/101‑1 (MQ=255)
aaCTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGt                                                                                                      <  1:8361911/101‑1 (MQ=255)
 tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcttt                                                                                                     <  1:1700251‑M2/2‑1 (MQ=255)
 aCTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGtt                                                                                                     <  1:13220084/101‑1 (MQ=255)
       cGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaa                                                                                               <  1:1172178‑M2/101‑4 (MQ=255)
        gggCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaag                                                                                              <  1:3290718‑M2/101‑5 (MQ=255)
          gCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggt                                                                                            >  1:8255002‑M2/1‑95 (MQ=255)
             tgaaagggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCa                                                                                         >  1:6647389‑M2/88‑101 (MQ=255)
              ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCaa                                                                                        <  1:8505321‑M2/15‑1 (MQ=255)
               ctctTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaa                                                                                       <  1:13629655‑M2/101‑12 (MQ=255)
                 ctTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaaca                                                                                     >  1:4653422‑M2/1‑88 (MQ=255)
                 cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgtt                                                                                     <  1:2685571‑M2/18‑1 (MQ=255)
                   tGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaag                                                                                   >  1:3202093‑M2/1‑86 (MQ=255)
                      cGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtcc                                                                                >  1:4843270‑M2/1‑83 (MQ=255)
                        aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGcac                                                                              >  1:8880584‑M2/77‑101 (MQ=255)
                        aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGcac                                                                              <  1:942213‑M2/25‑1 (MQ=255)
                        aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGcac                                                                              >  1:2176691‑M2/77‑101 (MQ=255)
                        aTCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccct                                                                              >  1:13441067‑M2/1‑81 (MQ=255)
                         tCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCCCTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtcccta                                                                             <  1:860413‑M2/101‑22 (MQ=255)
                         aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGcaca                                                                             >  1:10754533‑M2/76‑101 (MQ=255)
                           aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATa                                                                           <  1:6196360‑M2/28‑1 (MQ=255)
                             ttAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatat                                                                         <  1:5415050‑M2/101‑26 (MQ=255)
                             ttAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatat                                                                         <  1:796715‑M2/101‑26 (MQ=255)
                               aaTCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatga                                                                       <  1:10498896‑M2/101‑28 (MQ=255)
                                gctcaaacatgaagatatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGa                                                                      <  1:14097418‑M2/33‑1 (MQ=255)
                                aTCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgag                                                                      <  1:10319386‑M2/101‑29 (MQ=255)
                                  cGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagat                                                                    >  1:12347665‑M2/1‑71 (MQ=255)
                                    ttATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatca                                                                  <  1:7279903‑M2/101‑33 (MQ=255)
                                     aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAAtgg                                                                 <  1:5960713‑M2/38‑1 (MQ=255)
                                      acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAAtggt                                                                <  1:4166024‑M2/39‑1 (MQ=255)
                                           tCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                           <  1:11524936‑M2/101‑40 (MQ=255)
                                           tCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                           >  1:7040974‑M2/1‑62 (MQ=255)
                                            agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAaga                                                          >  1:2295122‑M2/57‑101 (MQ=255)
                                             gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAagag                                                         <  1:14311177‑M2/46‑1 (MQ=255)
                                                ttCAACAGATTACAGAGCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                      <  1:10201999‑M2/101‑45 (MQ=255)
                                                atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAAc                                                      >  1:9618234‑M2/53‑101 (MQ=255)
                                                 tCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                     <  1:13064795‑M2/101‑46 (MQ=255)
                                                  gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGc                                                    <  1:15279527‑M2/51‑1 (MQ=255)
                                                  cGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                    <  1:7723051‑M2/101‑47 (MQ=255)
                                                   gACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                   <  1:5274621‑M2/101‑48 (MQ=255)
                                                    aCAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                  >  1:870770‑M2/1‑53 (MQ=255)
                                                      tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAg                                                <  1:6118997‑M2/55‑1 (MQ=255)
                                                       gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAgg                                               >  1:9324816‑M2/46‑101 (MQ=255)
                                                          tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGa                                            >  1:9157337‑M2/43‑101 (MQ=255)
                                                          tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGa                                            >  1:7834554‑M2/43‑101 (MQ=255)
                                                             gtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAAc                                         >  1:6403658‑M2/40‑101 (MQ=255)
                                                              tcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACg                                        <  1:1497054‑M2/63‑1 (MQ=255)
                                                                ccTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                      >  1:2025052‑M2/1‑41 (MQ=255)
                                                                 cTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcaatagaacagga                                     <  1:14554804‑M2/101‑62 (MQ=255)
                                                                  tAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                    >  1:4069519‑M2/1‑39 (MQ=255)
                                                                   cgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGAc                                   <  1:7426682‑M2/68‑1 (MQ=255)
                                                                   cgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGAc                                   >  1:814843‑M2/34‑101 (MQ=255)
                                                                    aaCTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                  >  1:7584008‑M2/1‑37 (MQ=255)
                                                                     agaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAg                                 <  1:254230‑M2/70‑1 (MQ=255)
                                                                     aCTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                 <  1:1595617‑M2/101‑66 (MQ=255)
                                                                      gaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCAAATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGt                                >  1:12984902‑M2/31‑101 (MQ=255)
                                                                       ttGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                               <  1:14706803‑M2/101‑68 (MQ=255)
                                                                          aatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTa                            <  1:655173‑M2/75‑1 (MQ=255)
                                                                          aaGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggggccatagaacagggttcatcatg                            >  1:8053129‑M2/1‑31 (MQ=255)
                                                                          aaGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                            <  1:5833187‑M2/101‑71 (MQ=255)
                                                                            tttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAgg                          >  1:11170296‑M2/25‑101 (MQ=255)
                                                                             ttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGt                         >  1:3803553‑M2/24‑101 (MQ=255)
                                                                             ttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGt                         <  1:516970‑M2/78‑1 (MQ=255)
                                                                             ttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGt                         >  1:6321423‑M2/24‑101 (MQ=255)
                                                                             cACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatcagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                         <  1:10570850‑M2/101‑74 (MQ=255)
                                                                              aCTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                        <  1:13776854‑M2/101‑75 (MQ=255)
                                                                               ccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCt                       >  1:9003016‑M2/22‑101 (MQ=255)
                                                                               ccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCt                       <  1:13918971‑M2/80‑1 (MQ=255)
                                                                               cTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                       <  1:1516449‑M2/101‑76 (MQ=255)
                                                                                cccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCtt                      <  1:10074397‑M2/81‑1 (MQ=255)
                                                                                 ccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTa                     <  1:108411‑M2/82‑1 (MQ=255)
                                                                                 ccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTa                     <  1:4429740‑M2/82‑1 (MQ=255)
                                                                                  cgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTaa                    <  1:9088658‑M2/83‑1 (MQ=255)
                                                                                  cgcttattcgcaccttccTTAGGTATAAATCAAGTTGCTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGCCTTaa                    >  1:2825649‑M2/19‑101 (MQ=255)
                                                                                   tAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                   <  1:11648275‑M2/101‑80 (MQ=255)
                                                                                    cttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACg                  >  1:13289854‑M2/17‑101 (MQ=255)
                                                                                     gCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                 >  1:567990‑M2/1‑20 (MQ=255)
                                                                                     gCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                 <  1:3480554‑M2/101‑82 (MQ=255)
                                                                                      cATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcacgagtcatcaactt                <  1:12735511‑M2/101‑83 (MQ=255)
                                                                                       aTGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta               <  1:11338651‑M2/101‑84 (MQ=255)
                                                                                       aTGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta               <  1:11042954‑M2/101‑84 (MQ=255)
                                                                                        tGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac              <  1:6826905‑M2/101‑85 (MQ=255)
                                                                                         tcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGt             >  1:5562856‑M2/12‑101 (MQ=255)
                                                                                          ttCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagttcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct            >  1:14845736‑M2/1‑15 (MQ=255)
                                                                                          cgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTg            >  1:9853938‑M2/11‑101 (MQ=255)
                                                                                            cacaAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc          <  1:3600224‑M2/101‑89 (MQ=255)
                                                                                             accttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACa         <  1:14424702‑M2/94‑1 (MQ=255)
                                                                                             acaAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg         >  1:12195737‑M2/1‑12 (MQ=255)
                                                                                             acaAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg         <  1:10006629‑M2/101‑90 (MQ=255)
                                                                                              caAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc        <  1:3683690‑M2/101‑91 (MQ=255)
                                                                                              caAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc        <  1:977104‑M2/101‑91 (MQ=255)
                                                                                               aaaTGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc       <  1:11842727‑M2/101‑92 (MQ=255)
                                                                                                aaTGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg      >  1:5023362‑M2/1‑9 (MQ=255)
                                                                                                 tccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTaa     <  1:2425469‑M2/98‑1 (MQ=255)
                                                                                                 aTGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga     <  1:3108305‑M2/101‑94 (MQ=255)
                                                                                                 aTGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga     <  1:12862386‑M2/101‑94 (MQ=255)
                                                                                                  ccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTaaa    >  1:4008051‑M2/3‑101 (MQ=255)
                                                                                                  ccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCAAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTaaa    <  1:1241861‑M2/99‑1 (MQ=255)
                                                                                                   gTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca   <  1:11991555‑M2/101‑96 (MQ=255)
                                                                                                   cTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAc   <  1:7200938‑M2/100‑1 (MQ=255)
                                                                                                    |                                                                                                    
AACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACA  >  NC_007779/4009099‑4009299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.