New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 43103620 (0.000)366 (1.280) 149/172 NT 100% intergenic (‑286/‑69) yjcS/insH alkyl sulfatase/IS5 element protein
?NC_007779 4311562 = 0 (0.000)coding (916/1029 nt) alsK D‑allose kinase

Only 100 of 413 total aligned reads displayed.

TAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  NC_007779/4310262‑4310462
                                                                                                    |                                                                                                    
taataTGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAG                                                                                                      >  1:10941600‑M1/1‑101 (MQ=255)
taataTGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAG                                                                                                      <  1:5728242‑M1/101‑1 (MQ=255)
 aataTGAGTCGTTTTATGTGTTTATTATATATATTGTACCCGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGc                                                                                                     <  1:7944732‑M1/101‑2 (MQ=255)
    atGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcaca                                                                                                  <  1:4438333‑M1/101‑5 (MQ=255)
    atGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcaca                                                                                                  <  1:13980557‑M1/101‑5 (MQ=255)
      gAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacaga                                                                                                >  1:972849‑M1/1‑95 (MQ=255)
         tCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaact                                                                                             >  1:10343196‑M1/1‑92 (MQ=255)
          cGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactg                                                                                            >  1:5417310‑M1/1‑91 (MQ=255)
           gTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacaggactgt                                                                                           >  1:13108723‑M1/1‑90 (MQ=255)
           gTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgt                                                                                           >  1:15132674‑M1/1‑90 (MQ=255)
            ttttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtg                                                                                          >  1:1002067‑M1/1‑89 (MQ=255)
            ttttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtg                                                                                          >  1:524368‑M1/1‑89 (MQ=255)
            ttttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtg                                                                                          <  1:2466438‑M1/101‑13 (MQ=255)
            ttttATGCGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGCCATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtg                                                                                          >  1:6157606‑M1/1‑89 (MQ=255)
             tttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtgg                                                                                         <  1:4623528‑M1/101‑14 (MQ=255)
             tttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtgg                                                                                         <  1:2870324‑M1/101‑14 (MQ=255)
             tttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtgg                                                                                         <  1:12422986‑M1/101‑14 (MQ=255)
               tATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggca                                                                                       <  1:8383748‑M1/101‑16 (MQ=255)
               tATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggca                                                                                       >  1:8235314‑M1/1‑86 (MQ=255)
               tATGTGTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaa                                                                                      >  1:4239278‑M1/1‑85 (MQ=255)
                 tgtgTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaa                                                                                     <  1:1208071‑M1/101‑18 (MQ=255)
                  gtgtTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaa                                                                                    >  1:2115184‑M1/1‑83 (MQ=255)
                  gtgtTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaa                                                                                    >  1:13521782‑M1/1‑83 (MQ=255)
                   tgtTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaa                                                                                   >  1:11246331‑M1/1‑82 (MQ=255)
                      ttattaTATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacg                                                                                <  1:6519272‑M1/101‑23 (MQ=255)
                      ttattaTATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacg                                                                                >  1:910521‑M1/1‑79 (MQ=255)
                          tatatataTTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttga                                                                            >  1:181272‑M1/1‑75 (MQ=255)
                            tatatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatg                                                                          >  1:7170195‑M1/1‑73 (MQ=255)
                            tatatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatg                                                                          <  1:6436215‑M1/101‑29 (MQ=255)
                               atatTGTACCTGTCGTTCGCACAGCGGGACATTGCGCTACTGTGCCAACGGTTTACTCCTGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgc                                                                       >  1:14743628‑M1/1‑70 (MQ=255)
                                tatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgcc                                                                      >  1:3002086‑M1/1‑69 (MQ=255)
                                tatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgcc                                                                      >  1:551066‑M1/1‑69 (MQ=255)
                                   tGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaat                                                                   <  1:12995722‑M1/101‑36 (MQ=255)
                                   tGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaat                                                                   <  1:10855599‑M1/101‑36 (MQ=255)
                                   tGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaat                                                                   >  1:11019574‑M1/1‑66 (MQ=255)
                                    gTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaata                                                                  <  1:9275560‑M1/101‑37 (MQ=255)
                                    gTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaata                                                                  >  1:12565155‑M1/1‑65 (MQ=255)
                                     tACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatat                                                                 >  1:10606161‑M1/1‑64 (MQ=255)
                                     tACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTATACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatat                                                                 >  1:14549917‑M1/1‑64 (MQ=255)
                                      aCCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatatt                                                                >  1:14996403‑M1/1‑63 (MQ=255)
                                         tGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgct                                                             <  1:8616164‑M1/101‑42 (MQ=255)
                                         tGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgct                                                             >  1:7769014‑M1/1‑60 (MQ=255)
                                         tGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgct                                                             >  1:9588095‑M1/1‑60 (MQ=255)
                                           tCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgc                                                           >  1:11919516‑M1/1‑58 (MQ=255)
                                           tCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgc                                                           <  1:14795450‑M1/101‑44 (MQ=255)
                                           tCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgc                                                           <  1:14224817‑M1/101‑44 (MQ=255)
                                            cGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgca                                                          >  1:14130258‑M1/1‑57 (MQ=255)
                                               tGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccc                                                       >  1:1727534‑M1/1‑54 (MQ=255)
                                                ggCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccct                                                      <  1:886593‑M1/101‑49 (MQ=255)
                                                  cacaGCGGGACATTGCGCTACTGTGCCAACTTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctga                                                    <  1:14446738‑M1/101‑51 (MQ=255)
                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                   <  1:2276371‑M1/101‑52 (MQ=255)
                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                   <  1:9326265‑M1/101‑52 (MQ=255)
                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                   >  1:8569088‑M1/1‑50 (MQ=255)
                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                   <  1:13244541‑M1/101‑52 (MQ=255)
                                                    caGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagc                                                  <  1:13637177‑M1/101‑53 (MQ=255)
                                                    caGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagc                                                  <  1:3426615‑M1/101‑53 (MQ=255)
                                                     aGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcg                                                 >  1:2578478‑M1/1‑48 (MQ=255)
                                                     aGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcg                                                 <  1:13347343‑M1/101‑54 (MQ=255)
                                                      gCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgc                                                >  1:8051402‑M1/1‑47 (MQ=255)
                                                      gCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgc                                                >  1:14318499‑M1/1‑47 (MQ=255)
                                                       cGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgcc                                               >  1:9777064‑M1/1‑46 (MQ=255)
                                                       cGGGACATTGCGCTACTGTGCCAACGGTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgcc                                               >  1:9917591‑M1/1‑46 (MQ=255)
                                                         ggACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccat                                             >  1:4063558‑M1/1‑44 (MQ=255)
                                                          gACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccatt                                            >  1:5000680‑M1/1‑43 (MQ=255)
                                                           aCATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccatta                                           >  1:13693041‑M1/1‑42 (MQ=255)
                                                             aTTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaa                                         <  1:3738749‑M1/101‑62 (MQ=255)
                                                                gcgcTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtc                                      <  1:11543934‑M1/101‑65 (MQ=255)
                                                                gcgcTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtc                                      <  1:4854006‑M1/101‑65 (MQ=255)
                                                                gcgcTACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatacgccaatattgctgcaccctgagcgccattaaagtc                                      >  1:2003104‑M1/1‑37 (MQ=255)
                                                                gcgcTACTGTGCCAACGTTTTACTCATGGGGCGTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtc                                      >  1:12606430‑M1/1‑37 (MQ=255)
                                                                    tACTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaa                                  <  1:9013468‑M1/101‑69 (MQ=255)
                                                                      cTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaaga                                <  1:5111017‑M1/101‑71 (MQ=255)
                                                                      cTGTGCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaaga                                <  1:11399185‑M1/101‑71 (MQ=255)
                                                                          gCCAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgag                            <  1:13324703‑M1/101‑75 (MQ=255)
                                                                           ccAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgagg                           <  1:6732480‑M1/101‑76 (MQ=255)
                                                                           ccAACGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgagg                           <  1:14479909‑M1/101‑76 (MQ=255)
                                                                             aaCGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcg                         <  1:14948998‑M1/101‑78 (MQ=255)
                                                                              aCGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcgg                        <  1:6864143‑M1/101‑79 (MQ=255)
                                                                              aCGTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcgg                        <  1:7284319‑M1/101‑79 (MQ=255)
                                                                                gTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggca                      <  1:13833165‑M1/101‑81 (MQ=255)
                                                                                gTTTTACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggca                      >  1:6321266‑M1/1‑21 (MQ=255)
                                                                                 ttttACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaa                     <  1:6576116‑M1/101‑82 (MQ=255)
                                                                                 ttttACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaa                     <  1:5299363‑M1/101‑82 (MQ=255)
                                                                                  tttACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaat                    >  1:5938292‑M1/1‑19 (MQ=255)
                                                                                    tACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataa                  <  1:7007685‑M1/101‑85 (MQ=255)
                                                                                    tACTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataa                  <  1:4502810‑M1/101‑85 (MQ=255)
                                                                                     aCTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaa                 <  1:9391886‑M1/101‑86 (MQ=255)
                                                                                     aCTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaa                 <  1:12530082‑M1/101‑86 (MQ=255)
                                                                                      cTCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaag                >  1:815160‑M1/1‑15 (MQ=255)
                                                                                       tCATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagc               >  1:3613648‑M1/1‑14 (MQ=255)
                                                                                        cATGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcg              <  1:12231025‑M1/101‑89 (MQ=255)
                                                                                         aTGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgc             <  1:469089‑M1/101‑90 (MQ=255)
                                                                                         aTGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgc             >  1:8673603‑M1/1‑12 (MQ=255)
                                                                                          tGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgca            >  1:7560712‑M1/1‑11 (MQ=255)
                                                                                           ggggCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcac           <  1:10559850‑M1/101‑92 (MQ=255)
                                                                                              gCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgac        <  1:1551324‑M1/101‑95 (MQ=255)
                                                                                                   aGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgat   <  1:11717501‑M1/101‑100 (MQ=255)
                                                                                                   aGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgat   <  1:2679035‑M1/101‑100 (MQ=255)
                                                                                                    gcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgatg  <  1:2354613‑M1/101‑101 (MQ=255)
                                                                                                    gcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgatg  <  1:12324090‑M1/101‑101 (MQ=255)
                                                                                                    |                                                                                                    
TAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA  >  NC_007779/4310262‑4310462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.