| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,178,210 | A→C | 3.3% | intergenic (+179/+183) | insH → / ← gatZ | IS5 element protein/D‑tagatose 1,6‑bisphosphate aldolase 2, subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 2,178,210 | 0 | A→C | 3.3% | 21.0 0.0 ‑0.0 | 334 | intergenic (+179/+183) | insH/gatZ | IS5 element protein/D‑tagatose 1,6‑bisphosphate aldolase 2, subunit |
| Reads supporting (aligned to +/- strand): new base (5/6): ref base (148/175): total (153/181) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.95e-01 | ||||||||||
Only 100 of 364 total aligned reads displayed.
GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATCT > NC_007779/2178110‑2178310 | tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCa < 1:6728441‑M1/2‑1 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCaa > 1:8354217‑M1/99‑101 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAt > 1:4585593‑M1/98‑101 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAt > 1:6511185‑M1/98‑101 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATa < 1:6368818‑M1/5‑1 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATa > 1:13216373‑M1/97‑101 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCatatg < 1:2304444‑M1/7‑3 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCatatg < 1:7687644‑M1/7‑3 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGc < 1:14927823‑M1/7‑1 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCcatatgc < 1:13404141‑M1/8‑4 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCg < 1:3083966‑M1/8‑1 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccatatgca > 1:6059633‑M1/93‑97 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccatatgcac < 1:14830474‑M1/10‑6 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGtg < 1:1297292‑M1/10‑1 (MQ=255) ggaacaggagagacagctgatagaaacagaagccactggagcacctcaaaaaccccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGtg > 1:11392929‑M1/92‑101 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGtgc < 1:4101329‑M1/11‑1 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGtgctg < 1:13616933‑M1/13‑1 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGtgctgc < 1:7794543‑M1/14‑1 (MQ=255) aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTgctgct < 1:6712458‑M1/15‑1 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCa > 1:12121903‑M1/85‑101 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCa < 1:7201857‑M1/17‑1 (MQ=255) agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCaa < 1:3179029‑M1/18‑1 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGc < 1:6655158‑M1/20‑1 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAt > 1:11684532‑M1/80‑101 (MQ=255) acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAt > 1:10053232‑M1/80‑101 (MQ=255) cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCAtt > 1:7302007‑M1/79‑101 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTa > 1:7457786‑M1/78‑101 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTAt > 1:9544567‑M1/77‑101 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTAt > 1:566084‑M1/77‑101 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTAt < 1:5367281‑M1/25‑1 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATc > 1:2521900‑M1/76‑101 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATc < 1:12679524‑M1/26‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATcc < 1:3817215‑M1/27‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATcc < 1:2945123‑M1/27‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATcc > 1:10489268‑M1/75‑101 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATccc > 1:10699751‑M1/74‑101 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGt > 1:11715696‑M1/71‑101 (MQ=255) agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGt > 1:2190311‑M1/71‑101 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatgagtaagttggcagcctcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTa > 1:1370451‑M1/70‑101 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagaaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTa > 1:2853720‑M1/70‑101 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg > 1:10950995‑M1/69‑101 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAg < 1:3049848‑M1/33‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAggg < 1:3361632‑M1/35‑1 (MQ=255) cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGa < 1:3603699‑M1/36‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAAtt > 1:9821464‑M1/63‑101 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTg < 1:1240422‑M1/42‑1 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTg < 1:12847466‑M1/42‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCt < 1:5266095‑M1/44‑1 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCtt > 1:10831605‑M1/57‑101 (MQ=255) tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTtc < 1:10351354‑M1/46‑1 (MQ=255) gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTg > 1:14587950‑M1/52‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCaa < 1:10036864‑M1/54‑1 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAAtt < 1:13835657‑M1/56‑1 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAAt < 1:14212698‑M1/59‑1 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg > 1:9289847‑M1/42‑101 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg > 1:7869307‑M1/42‑101 (MQ=255) aacaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATg < 1:6188634‑M1/60‑1 (MQ=255) acaccatcatacgctaaagcagtaagttggcagcatcgccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGc > 1:5985521‑M1/41‑101 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGc > 1:9095835‑M1/41‑101 (MQ=255) acaccatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGc > 1:254075‑M1/41‑101 (MQ=255) accatcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCt < 1:1844073‑M1/63‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCtgt < 1:11071222‑M1/65‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTgg < 1:1715523‑M1/67‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTgg < 1:5773633‑M1/67‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAACTCTGCTTCTCTGGCAATTAATGCCTGTgg > 1:15238980‑M1/35‑101 (MQ=255) atacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGcc < 1:5030808‑M1/69‑1 (MQ=255) tacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCa > 1:3552993‑M1/32‑101 (MQ=255) tacactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCa < 1:3686635‑M1/70‑1 (MQ=255) acactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAg > 1:1536662‑M1/31‑101 (MQ=255) cactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAgg < 1:1156434‑M1/72‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAgg > 1:3965171‑M1/30‑101 (MQ=255) aatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCa > 1:8464484‑M1/25‑101 (MQ=255) aatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCa > 1:1642642‑M1/25‑101 (MQ=255) aatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCa > 1:7649309‑M1/25‑101 (MQ=255) aatcagtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCa > 1:11643016‑M1/25‑101 (MQ=255) agtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGaa > 1:14449546‑M1/21‑101 (MQ=255) agtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGaa > 1:3909041‑M1/21‑101 (MQ=255) gtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAAc > 1:6977503‑M1/20‑101 (MQ=255) gtaagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAAc < 1:13999985‑M1/82‑1 (MQ=255) taagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAAcc > 1:3732948‑M1/19‑101 (MQ=255) aagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACca < 1:14131684‑M1/84‑1 (MQ=255) aagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACca < 1:2117664‑M1/84‑1 (MQ=255) aagttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACca < 1:15011644‑M1/84‑1 (MQ=255) agttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACcac < 1:1471626‑M1/85‑1 (MQ=255) gttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGTCAATTAATGCCTGTGGCCAGGTATCATGAACcaca > 1:11867330‑M1/16‑101 (MQ=255) gttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACcaca < 1:10419657‑M1/86‑1 (MQ=255) gttggcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACcaca > 1:8008131‑M1/16‑101 (MQ=255) gcagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCtt > 1:4423061‑M1/12‑101 (MQ=255) cagcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCttt < 1:4284274‑M1/91‑1 (MQ=255) gcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTgg > 1:8898490‑M1/9‑101 (MQ=255) gcatcaccCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTgg > 1:4204891‑M1/9‑101 (MQ=255) accCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGc < 1:8850933‑M1/98‑1 (MQ=255) cCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAt < 1:8230729‑M1/100‑1 (MQ=255) cCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAt > 1:8596800‑M1/2‑101 (MQ=255) cCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAt < 1:12517943‑M1/100‑1 (MQ=255) cCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTCTGGCGAGCAt > 1:4746408‑M1/2‑101 (MQ=255) cAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAtc > 1:5531060/1‑101 (MQ=255) cAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAtc > 1:7079276/1‑101 (MQ=255) aaTAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAtct > 1:8058445/1‑101 (MQ=255) aaTAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCAtct > 1:13098939/1‑101 (MQ=255) | GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATCT > NC_007779/2178110‑2178310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |