BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 274373	NA (NA)	13 (0.050)	12/180	NT	4.0%	intergenic (‑32/‑176)	insH/mmuP	IS5 transposase and trans‑activator/S‑methylmethionine transporter
*	?	NC_007779	675375 =	315 (1.300)	13 (0.050)	12/180	NT	4.0%	intergenic (‑170/‑65)	leuS/ybeL	leucyl‑tRNA synthetase/hypothetical protein

Only 100 of 373 total aligned reads displayed.

GCATAGCCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGTT  >  NC_007779/675275‑675475

gcatagcCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTAt                                                                                                      >  1:11556951/1‑101 (MQ=255)

   tagcCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTag                                                                                                   <  1:1759382/101‑1 (MQ=255)

    agcCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGATTGTGGGCGTATTagc                                                                                                  >  1:5459225/1‑101 (MQ=255)

     gcCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagca                                                                                                 <  1:12005327/101‑1 (MQ=255)

       ccAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaa                                                                                               >  1:7581343/1‑101 (MQ=255)

        cAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaag                                                                                              >  1:1373202/1‑101 (MQ=255)

         aaaCGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaagc                                                                                             <  1:8920833/101‑1 (MQ=255)

         aaaCGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaagc                                                                                             >  1:1318268/1‑101 (MQ=255)

          aaCGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaagca                                                                                            >  1:11242877/1‑101 (MQ=255)

           aCGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTagcaaagcaa                                                                                           >  1:11916138/1‑101 (MQ=255)

             gTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAgg                                                                                         >  1:2254783/1‑101 (MQ=255)

              tCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGa                                                                                        <  1:10899797/101‑1 (MQ=255)

              tCCGCGTCAAAACAGCCTTTCGCACACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGa                                                                                        >  1:7405532/1‑101 (MQ=255)

                cgcgTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAAc                                                                                      >  1:4460658/1‑101 (MQ=255)

                 gcgTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACa                                                                                     >  1:7725530/1‑101 (MQ=255)

                 gcgTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACa                                                                                     <  1:7259052/101‑1 (MQ=255)

                  cgTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACaa                                                                                    <  1:8724984/101‑1 (MQ=255)

                   gTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACaaa                                                                                   <  1:286283/101‑1 (MQ=255)

                   gTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACaaa                                                                                   >  1:7859937/1‑101 (MQ=255)

                    tCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAg                                                                                  >  1:2400667/1‑101 (MQ=255)

                      aaaaCAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGaa                                                                                >  1:9902627/1‑101 (MQ=255)

                       aaaCAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAAc                                                                               <  1:204610/101‑1 (MQ=255)

                          aaGCCTTTCGCGGCCTCGACCTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTc                                                                            <  1:10059342/100‑1 (MQ=255)

                           aGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCt                                                                           >  1:4649249/1‑101 (MQ=255)

                            gCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCta                                                                          <  1:3847434/101‑1 (MQ=255)

                            gCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCta                                                                          <  1:5044097/101‑1 (MQ=255)

                              cTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCtatt                                                                        >  1:4247953/1‑101 (MQ=255)

                               tttCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCtatta                                                                       >  1:11884449/1‑101 (MQ=255)

                               tttCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCtatta                                                                       >  1:10814332/1‑101 (MQ=255)

                               tttCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCtatta                                                                       <  1:2558522/101‑1 (MQ=255)

                                 tCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCtattatt                                                                     >  1:6880155/1‑101 (MQ=255)

                                    cgcACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATtata                                                                  >  1:5366521/1‑101 (MQ=255)

                                    cgcACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATtata                                                                  <  1:3092295/101‑1 (MQ=255)

                                     gcACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAGCAAAGAACGTCTATTATTATAg                                                                 >  1:8892147/1‑101 (MQ=255)

                                      cACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAATCAAGGAACAAAGAACGTCTATTATTATAGt                                                                <  1:10469994/101‑1 (MQ=255)

                                       aCTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTc                                                               <  1:2154993/101‑1 (MQ=255)

                                         tCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTTTATTATTATAGTCAg                                                             >  1:11464043/1‑101 (MQ=255)

                                           gACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGtt                                                           <  1:73227/101‑1 (MQ=255)

                                           gACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATGATTATAGTCAGtt                                                           >  1:7985838/1‑101 (MQ=255)

                                             ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTaa                                                         <  1:7137910‑M2/46‑1 (MQ=255)

                                             cGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTaa                                                         <  1:10598293/101‑1 (MQ=255)

                                              gTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAAc                                                        >  1:9739026/1‑101 (MQ=255)

                                               ttGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACg                                                       >  1:1816330/1‑101 (MQ=255)

                                                tGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGa                                                      >  1:6569872/1‑101 (MQ=255)

                                                tGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGa                                                      >  1:7356116/1‑101 (MQ=255)

                                                    atgatgCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCg                                                  <  1:5861760/101‑1 (MQ=255)

                                                     tgatgCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCgg                                                 >  1:4902786/1‑101 (MQ=255)

                                                       atgCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGga                                               >  1:1557064/1‑101 (MQ=255)

                                                        tgCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGgag                                              <  1:1244272/101‑1 (MQ=255)

                                                         gCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGgaga                                             >  1:11622901/1‑101 (MQ=255)

                                                          cccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGAt                                            >  1:4376948/1‑101 (MQ=255)

                                                          cccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGAt                                            <  1:1024029/101‑1 (MQ=255)

                                                          cccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGAt                                            <  1:3329332/101‑1 (MQ=255)

                                                           ccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATg                                           <  1:6371722/101‑1 (MQ=255)

                                                           ccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATg                                           >  1:6243382/1‑101 (MQ=255)

                                                           ccGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATg                                           <  1:5581579/101‑1 (MQ=255)

                                                             ggATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGaa                                         >  1:11033605/1‑101 (MQ=255)

                                                              gATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGaaa                                        <  1:3034310/101‑1 (MQ=255)

                                                              aaacatgatctcatatcagggacttgttcgcaccttccTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGaaa                                        >  1:3545228‑M2/39‑101 (MQ=255)

                                                                ttattCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACg                                      >  1:10700742/1‑101 (MQ=255)

                                                                  attCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGAt                                    >  1:814793/1‑101 (MQ=255)

                                                                   ttCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATg                                   >  1:6041909/1‑101 (MQ=255)

                                                                   ttCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATg                                   >  1:7498011/1‑101 (MQ=255)

                                                                    tCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGa                                  >  1:5709899/1‑101 (MQ=255)

                                                                    tCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGa                                  >  1:10441757/1‑101 (MQ=255)

                                                                    tCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGa                                  <  1:9820196/101‑1 (MQ=255)

                                                                    gatctcatatcagggacttgttcgcaccttccTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGa                                  >  1:4538520‑M2/33‑101 (MQ=255)

                                                                     cATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGaa                                 >  1:11784549/1‑101 (MQ=255)

                                                                      aTACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAAc                                >  1:9157718/1‑101 (MQ=255)

                                                                          aTTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAgg                            <  1:1615886/101‑1 (MQ=255)

                                                                           ttAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGt                           <  1:7044984/101‑1 (MQ=255)

                                                                           ttAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTAGTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGt                           >  1:10342473/1‑101 (MQ=255)

                                                                             tcagggacttgttcgcaccttccTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTg                         >  1:8655916‑M2/24‑101 (MQ=255)

                                                                              aTTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGc                        >  1:1136442/1‑101 (MQ=255)

                                                                               tttACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCt                       <  1:6477625/101‑1 (MQ=255)

                                                                                 tACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCa                     >  1:198477/1‑101 (MQ=255)

                                                                                 tACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCa                     >  1:9223195/1‑101 (MQ=255)

                                                                                  aCAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCaa                    >  1:3902506/1‑101 (MQ=255)

                                                                                  aCAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCaa                    <  1:833166/101‑1 (MQ=255)

                                                                                    agagTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAata                  <  1:2332329/101‑1 (MQ=255)

                                                                                    agagTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAata                  <  1:4749042/101‑1 (MQ=255)

                                                                                      agTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATAtt                <  1:5100962/101‑1 (MQ=255)

                                                                                        ttcgcaccttccTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTAc              <  1:9581321‑M2/89‑1 (MQ=255)

                                                                                         ttGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTAcc             >  1:2617884/1‑101 (MQ=255)

                                                                                         ttGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTAcc             >  1:499112/1‑101 (MQ=255)

                                                                                           gtgGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGt           <  1:9020993/101‑1 (MQ=255)

                                                                                            tgGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTg          >  1:8026740/1‑101 (MQ=255)

                                                                                            tgGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTg          <  1:8369918/101‑1 (MQ=255)

                                                                                            tgGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGACAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTg          >  1:9309336/1‑101 (MQ=255)

                                                                                              ggCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGaa        >  1:4045928/1‑101 (MQ=255)

                                                                                              ggCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGaa        <  1:2930618/101‑1 (MQ=255)

                                                                                                cGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACt      <  1:12185413/101‑1 (MQ=255)

                                                                                                cGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACt      >  1:4310105/1‑101 (MQ=255)

                                                                                                 gTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTg     <  1:10736799/101‑1 (MQ=255)

                                                                                                  tATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTgg    <  1:8445087/101‑1 (MQ=255)

                                                                                                   aTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGt   <  1:11216095/101‑1 (MQ=255)

                                                                                                   aTTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGt   >  1:4162311/1‑101 (MQ=255)

                                                                                                    ttAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGtt  >  1:314678/1‑101 (MQ=255)

                                                                                                    ttAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGtt  <  1:7830916/101‑1 (MQ=255)

                                                                                                    ttAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGtt  <  1:6687954/101‑1 (MQ=255)

GCATAGCCCAAACGTCCGCGTCAAAACAGCCTTTCGCGCACTCGACGTTGAAATGATGCCCGGATTATTCATACATTAATTTACAGAGTTTGTGGGCGTATTAGCAAAGCAAGGAACAAAGAACGTCTATTATTATAGTCAGTTAACGACCCGGGAGATGAAACGATGAACAAGGTTGCTCAATATTACCGTGAACTGGTT  >  NC_007779/675275‑675475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.