Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_007779 1,724,327 Δ3 bp 12.1% coding (493‑495/2013 nt) ydhK → inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 1724326195 (0.920)30 (0.120) 4/158 NT 12.1% coding (492/2013 nt) ydhK inner membrane protein
?NC_007779 1724330 = 215 (0.890)coding (496/2013 nt) ydhK inner membrane protein

Only 100 of 256 total aligned reads displayed.

CGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCA  >  NC_007779/1724230‑1724430
                                                                                                    |                                                                                                    
catcgcctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggca                                                                                                      >  1:6368349‑M2/101‑101 (MQ=255)
 atcgcctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcat                                                                                                     <  1:4003568‑M2/2‑1 (MQ=255)
     cctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatg                                                                                                 >  1:9504127‑M2/96‑101 (MQ=255)
     cctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatg                                                                                                 >  1:9405048‑M2/96‑101 (MQ=255)
     cctttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatg                                                                                                 >  1:4109290‑M2/96‑101 (MQ=255)
        ttccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatgatg                                                                                              <  1:12030435‑M2/9‑1 (MQ=255)
         gATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCAtgatgatgatga                                                                                             >  1:536164/1‑101 (MQ=255)
          ccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcatgatgatgac                                                                                            <  1:11930905‑M2/11‑2 (MQ=255)
          ccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcATgatgatgat                                                                                            <  1:4628768‑M2/11‑1 (MQ=255)
          ccgatggttaatattactgaggccagccagctgtgggatatcgctcaggcgcgcgtttgcgaggtaatagtcggtattttgtgcggcggcATgatgatgat                                                                                            >  1:9296021‑M2/91‑101 (MQ=255)
           tGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCAtgatgatgatgaac                                                                                           >  1:5743316/1‑99 (MQ=255)
           tGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATc                                                                                           >  1:7191185/1‑101 (MQ=255)
             gTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCt                                                                                         <  1:3074343/101‑1 (MQ=255)
              ttAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTg                                                                                        <  1:10556853/101‑1 (MQ=255)
              ttAAGATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTg                                                                                        >  1:12200802/1‑101 (MQ=255)
               tAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGc                                                                                       <  1:6069573/101‑1 (MQ=255)
                aaTATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                                      >  1:9089147/1‑101 (MQ=255)
                aaTATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                                      <  1:1990328/101‑1 (MQ=255)
                aaTATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGcc                                                                                      >  1:6635185/1‑101 (MQ=255)
                 atatTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCg                                                                                     >  1:10187717/1‑101 (MQ=255)
                  tatTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGa                                                                                    <  1:3342827/101‑1 (MQ=255)
                    ttACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGc                                                                                  >  1:8641064/1‑101 (MQ=255)
                    ttACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGc                                                                                  <  1:768190/101‑1 (MQ=255)
                        tGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGtt                                                                              <  1:2558085/101‑1 (MQ=255)
                        tGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGtc                                                                              >  1:2844599/1‑100 (MQ=255)
                          aGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTcc                                                                            <  1:10233768/101‑1 (MQ=255)
                           ggCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCg                                                                           >  1:4515667/1‑101 (MQ=255)
                              cagccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                        >  1:4311086/1‑101 (MQ=255)
                              cagccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                        >  1:8157054/1‑101 (MQ=255)
                              cagccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATg                                                                        <  1:5405512/101‑1 (MQ=255)
                               agccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGc                                                                       >  1:1461680/1‑101 (MQ=255)
                               agccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGc                                                                       >  1:3179469/1‑101 (MQ=255)
                                gccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCt                                                                      >  1:2308509/1‑101 (MQ=255)
                                gccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCt                                                                      <  1:5678145/101‑1 (MQ=255)
                                 ccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTa                                                                     <  1:11030904/101‑1 (MQ=255)
                                 ccagcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTACGATGCTa                                                                     >  1:3128103/1‑101 (MQ=255)
                                 ccagcTGTGGGATATCGCCCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTa                                                                     >  1:10814334/1‑101 (MQ=255)
                                   agcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACt                                                                   <  1:4824165/101‑1 (MQ=255)
                                   agcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACt                                                                   <  1:5516970/101‑1 (MQ=255)
                                    gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTg                                                                  <  1:3529110/101‑1 (MQ=255)
                                    gcTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTg                                                                  <  1:7054769/101‑1 (MQ=255)
                                     cTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGc                                                                 >  1:3523461/1‑101 (MQ=255)
                                      tgtgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGcc                                                                <  1:2956871/101‑1 (MQ=255)
                                        tgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCt                                                              >  1:5944139/1‑101 (MQ=255)
                                        tgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCt                                                              >  1:6761031/1‑101 (MQ=255)
                                        tgGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCt                                                              >  1:2776229/1‑101 (MQ=255)
                                         gggATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtt                                                             >  1:2120197/1‑101 (MQ=255)
                                           gATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtttt                                                           >  1:8904302/1‑101 (MQ=255)
                                           gATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCACGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCtttt                                                           <  1:8594348/101‑1 (MQ=255)
                                            gtatCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTa                                                          <  1:1685809/100‑1 (MQ=255)
                                            atatCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTa                                                          <  1:10610794/101‑1 (MQ=255)
                                             tatCGCTCGCGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTaa                                                         <  1:2008960/101‑1 (MQ=255)
                                             tatCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTaa                                                         <  1:830574/101‑1 (MQ=255)
                                               tCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAAcc                                                       <  1:1911805/101‑1 (MQ=255)
                                               tCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAAcc                                                       <  1:9358957/101‑1 (MQ=255)
                                                 gCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGGGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGc                                                     >  1:5024761/1‑101 (MQ=255)
                                                  cTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCa                                                    >  1:2154463/1‑101 (MQ=255)
                                                    cAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGGTACTGCCCTTTTAACCGCAtt                                                  >  1:8546513/1‑101 (MQ=255)
                                                    cAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCAtt                                                  >  1:8528051/1‑101 (MQ=255)
                                                    cAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCAtt                                                  <  1:1243227/101‑1 (MQ=255)
                                                     aGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTg                                                 <  1:7464782/101‑1 (MQ=255)
                                                     aGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTg                                                 <  1:6213186/101‑1 (MQ=255)
                                                     aGGCGCGCGGTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTg                                                 <  1:2907469/101‑1 (MQ=255)
                                                      ggCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGa                                                <  1:10431410/101‑1 (MQ=255)
                                                       gcgcgcGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaa                                               <  1:11694576/101‑1 (MQ=255)
                                                        cgcgcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaa                                              <  1:6575919/101‑1 (MQ=255)
                                                          cgcgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGaaaaa                                            >  1:1538323/1‑101 (MQ=255)
                                                            cgTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACa                                          <  1:9670394/101‑1 (MQ=255)
                                                             gTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACAt                                         <  1:2799388/101‑1 (MQ=255)
                                                              tttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATg                                        <  1:1089951/101‑1 (MQ=255)
                                                              tttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATg                                        >  1:11440990/1‑101 (MQ=255)
                                                               ttGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTCCTGCCCTTTTAACCGCATTGAAAAACATGc                                       >  1:7249917/1‑101 (MQ=255)
                                                                tGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCa                                      >  1:4247797/1‑101 (MQ=255)
                                                                 gCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCAc                                     >  1:52612/1‑101 (MQ=255)
                                                                 gCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCAc                                     >  1:6671784/1‑101 (MQ=255)
                                                                   gAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGc                                   >  1:11374510/1‑101 (MQ=255)
                                                                    aGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGcc                                  >  1:1008310/1‑101 (MQ=255)
                                                                       tAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCGGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa                               >  1:8469085/1‑101 (MQ=255)
                                                                       tAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa                               >  1:3894669/1‑101 (MQ=255)
                                                                       tAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGa                               <  1:339095/101‑1 (MQ=255)
                                                                         gtaatagtcggtattttgtgcggcggcATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGAtt                             <  1:11879836‑M2/74‑1 (MQ=255)
                                                                         aTAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGAtt                             <  1:10024527/101‑1 (MQ=255)
                                                                           aGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTAc                           >  1:11420960/1‑101 (MQ=255)
                                                                            gTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACt                          >  1:9591375/1‑101 (MQ=255)
                                                                             tCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTg                         >  1:9807842/1‑101 (MQ=255)
                                                                             tCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTg                         >  1:10986728/1‑101 (MQ=255)
                                                                               ggTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGa                       >  1:64705/1‑101 (MQ=255)
                                                                               ggTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGa                       >  1:10521405/1‑101 (MQ=255)
                                                                               ggTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGa                       >  1:1572681/1‑101 (MQ=255)
                                                                                gTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGaa                      <  1:6347321/101‑1 (MQ=255)
                                                                                gTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGaa                      >  1:4179343/1‑101 (MQ=255)
                                                                                gTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGaa                      >  1:11117998/1‑101 (MQ=255)
                                                                                       gtgCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCa               <  1:8736139/101‑1 (MQ=255)
                                                                                         gcggcgGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGt             >  1:3560747/1‑101 (MQ=255)
                                                                                         gcggcgGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGt             <  1:10039293/101‑1 (MQ=255)
                                                                                           ggcggcATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGttt           <  1:6917943/101‑1 (MQ=255)
                                                                                                cATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTActct      >  1:7839021/1‑101 (MQ=255)
                                                                                                 atgatgatgatgATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTATTGGAACATGCCAGTTTACTCTg     <  1:11965856/101‑1 (MQ=255)
                                                                                                  tgatgatgatgaTCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTgg    >  1:8010057/1‑101 (MQ=255)
                                                                                                   gatgatgatgatCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGc   <  1:4724763/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCA  >  NC_007779/1724230‑1724430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.