| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_007779 | 4,310,363 | Δ1,199 bp | 100% | insH–[alsK] | insH, [alsK] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 4310363 | 4311561–4310364 | 2–1199 | 301 [0] | [0] 299 | insH–[alsK] | insH, [alsK] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 4310362 | 0 (0.000) | 268 (1.170) | 123/172 | NT | 100% | intergenic (‑286/‑69) | yjcS/insH | alkyl sulfatase/IS5 element protein |
| ? | NC_007779 | 4311562 = | 0 (0.000) | coding (916/1029 nt) | alsK | D‑allose kinase | |||||
Only 100 of 299 total aligned reads displayed.
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGC > NC_007779/4311462‑4311662 | aatatgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagc < 1:6589044‑M2/1‑1 (MQ=255)aatatgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagc > 1:10603102‑M2/101‑101 (MQ=255) tatgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcac > 1:5529686‑M2/99‑101 (MQ=255) atgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcaca < 1:10498323‑M2/4‑1 (MQ=255) atgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcaca < 1:12079515‑M2/4‑1 (MQ=255) gagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGa > 1:2956814‑M2/96‑101 (MQ=255) agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa < 1:4154505‑M2/7‑1 (MQ=255) agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa < 1:5192995‑M2/7‑1 (MQ=255) tcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACt > 1:3250353‑M2/93‑101 (MQ=255) tcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACt > 1:8312393‑M2/93‑101 (MQ=255) tcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACt > 1:9826165‑M2/93‑101 (MQ=255) tcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgcgccaacgttttactcatggggctttagCACAGAACt > 1:1188616‑M2/93‑101 (MQ=255) gttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACtgt > 1:2650273‑M2/91‑101 (MQ=255) atgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaa < 1:7881482‑M2/16‑1 (MQ=255) tgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaa < 1:10699739‑M2/17‑1 (MQ=255) tgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaa < 1:9543729‑M2/17‑1 (MQ=255) tgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaa > 1:6296780‑M2/85‑101 (MQ=255) tgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaa < 1:9035200‑M2/17‑1 (MQ=255) gtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaaa < 1:9684430‑M2/18‑1 (MQ=255) gtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaaaaa < 1:7558817‑M2/20‑1 (MQ=255) gtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaaaaa > 1:1082901‑M2/82‑101 (MQ=255) gtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaaaaa > 1:8792191‑M2/82‑101 (MQ=255) tttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAAc > 1:3850442‑M2/81‑101 (MQ=255) ttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACg > 1:3792337‑M2/80‑101 (MQ=255) ttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACg > 1:9625733‑M2/80‑101 (MQ=255) tattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGt > 1:9263100‑M2/79‑101 (MQ=255) tattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGt < 1:10777692‑M2/23‑1 (MQ=255) attatatatattgtgcctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGtt < 1:9221837‑M2/24‑1 (MQ=255) attatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGtt > 1:2183549‑M2/78‑101 (MQ=255) attatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGtt < 1:11600082‑M2/24‑1 (MQ=255) ttatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTg > 1:9363159‑M2/77‑101 (MQ=255) tatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGa > 1:4030844‑M2/76‑101 (MQ=255) tatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATg > 1:4705444‑M2/74‑101 (MQ=255) atatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgc > 1:10986728‑M2/73‑101 (MQ=255) atattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgcgc > 1:176978‑M2/71‑101 (MQ=255) tattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGcc > 1:3044522‑M2/70‑101 (MQ=255) attgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCa > 1:2854666‑M2/69‑101 (MQ=255) attgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCa < 1:6257891‑M2/33‑1 (MQ=255) ttgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCaa > 1:8807470‑M2/68‑101 (MQ=255) ttgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCaa > 1:4044387‑M2/68‑101 (MQ=255) tgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAat < 1:1609361‑M2/35‑1 (MQ=255) gtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTTATGCGCCAata > 1:2486557‑M2/66‑101 (MQ=255) gtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAata > 1:492102‑M2/66‑101 (MQ=255) gtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAata > 1:2054479‑M2/66‑101 (MQ=255) tacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAatat < 1:2779824‑M2/37‑1 (MQ=255) tacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAatat > 1:1029440‑M2/65‑101 (MQ=255) tacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAatat > 1:5267252‑M2/65‑101 (MQ=255) cctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtg > 1:6066144‑M2/63‑101 (MQ=255) cctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtg > 1:10056214‑M2/63‑101 (MQ=255) gtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGACAAAATtgctg > 1:5078342‑M2/60‑101 (MQ=255) gttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAc > 1:360474‑M2/57‑101 (MQ=255) gttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAc < 1:4896537‑M2/45‑1 (MQ=255) gttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAc > 1:268423‑M2/57‑101 (MQ=255) gttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAc > 1:812498‑M2/57‑101 (MQ=255) ttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAcc > 1:4795357‑M2/56‑101 (MQ=255) ttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAcc < 1:11546053‑M2/46‑1 (MQ=255) tggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAccc < 1:339425‑M2/47‑1 (MQ=255) cacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGa < 1:6737041‑M2/50‑1 (MQ=255) acagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAg > 1:6107033‑M2/51‑101 (MQ=255) cagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAgc < 1:6141690‑M2/52‑1 (MQ=255) gcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAgcgc < 1:11204718‑M2/54‑1 (MQ=255) cgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGcc > 1:7438445‑M2/47‑101 (MQ=255) cgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGcc > 1:5619113‑M2/47‑101 (MQ=255) gggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCa > 1:4615608‑M2/46‑101 (MQ=255) ggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCAt > 1:1717534‑M2/45‑101 (MQ=255) gacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCAtt < 1:11738918‑M2/58‑1 (MQ=255) gacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCAtt < 1:7267260‑M2/58‑1 (MQ=255) acattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTa < 1:12116846‑M2/59‑1 (MQ=255) acattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTa > 1:7775242‑M2/43‑101 (MQ=255) cattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTaa > 1:5693394‑M2/42‑101 (MQ=255) ttgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAg > 1:11985733‑M2/40‑101 (MQ=255) tactgtgccaacgttttactcatggggctttagCACAGAACTTTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaa > 1:5821870‑M2/34‑101 (MQ=255) tactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaa < 1:10167991‑M2/68‑1 (MQ=255) actgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaag < 1:2323930‑M2/69‑1 (MQ=255) tgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGAt > 1:9859540‑M2/31‑101 (MQ=255) tgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGAt > 1:5730556‑M2/31‑101 (MQ=255) gtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATg < 1:11335645‑M2/72‑1 (MQ=255) tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa < 1:3104105‑M2/73‑1 (MQ=255) tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa > 1:3425058‑M2/29‑101 (MQ=255) tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa < 1:4404300‑M2/73‑1 (MQ=255) tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa < 1:6416259‑M2/73‑1 (MQ=255) gccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAg < 1:11393790‑M2/74‑1 (MQ=255) ccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAgg < 1:7601647‑M2/75‑1 (MQ=255) caacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggc > 1:5339051‑M2/26‑101 (MQ=255) aacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggcg > 1:1430449‑M2/25‑101 (MQ=255) cgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggcggc < 1:4273703‑M2/79‑1 (MQ=255) cgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggcggc < 1:8387964‑M2/79‑1 (MQ=255) gttttactcatggggctttagTACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCa < 1:1243622‑M2/80‑1 (MQ=255) gttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCa < 1:9083533‑M2/80‑1 (MQ=255) gttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCa > 1:7129010‑M2/22‑101 (MQ=255) ttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCaa < 1:76335‑M2/81‑1 (MQ=255) ttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATa < 1:9746311‑M2/83‑1 (MQ=255) tactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaa < 1:2388596‑M2/84‑1 (MQ=255) ctcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAg > 1:7931412‑M2/16‑101 (MQ=255) catggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAgcg > 1:2285010‑M2/14‑101 (MQ=255) atggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAgcgc > 1:1482597‑M2/13‑101 (MQ=255) tggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCa > 1:820706‑M2/12‑101 (MQ=255) ctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGAcc < 1:10923184‑M2/95‑1 (MQ=255) tttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCt < 1:6992052‑M2/96‑1 (MQ=255) agCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGAt < 1:6346727‑M2/99‑1 (MQ=255) | TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGC > NC_007779/4311462‑4311662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |