Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,898,657 C→G 100% L259V (CTG→GTG)  yiaJ → DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,898,6570C→G100.0% 1000.8 237L259V (CTG→GTG) yiaJDNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  new base (106/131):  ref base (0/0):  total (106/131)

Only 100 of 244 total aligned reads displayed.

CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754
                                                                                                  |                                                                                                 
 ggTGTTTGATATTCATGGGCGGTTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                >  1:10010928/1‑101 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTTGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                <  1:8453404/101‑1 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                <  1:7439655/101‑1 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                <  1:10818261/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:7248673/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTACTGAAACCAGTGCGt                                                                                              >  1:2632743/1‑101 (MQ=255)
     tttGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGa                                                                                            >  1:705401/1‑101 (MQ=255)
       tGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGgaa                                                                                          >  1:8055039/1‑101 (MQ=255)
       tGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGaaa                                                                                          <  1:11883910/101‑1 (MQ=255)
        gATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAAc                                                                                         >  1:1643971/1‑101 (MQ=255)
          tatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcg                                                                                       <  1:10631495/101‑1 (MQ=255)
          tatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcg                                                                                       <  1:6907084/101‑1 (MQ=255)
           atTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcgc                                                                                      <  1:765662/101‑1 (MQ=255)
            ttCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcgcg                                                                                     <  1:6313507/101‑1 (MQ=255)
               aTGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAg                                                                                  >  1:5257788/1‑101 (MQ=255)
                 gggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGc                                                                                >  1:9911921/1‑101 (MQ=255)
                  ggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCt                                                                               <  1:5615373/101‑1 (MQ=255)
                   gCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTa                                                                              <  1:11664232/101‑1 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             <  1:6445582/101‑1 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             >  1:1438261/1‑101 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             >  1:4829926/1‑101 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             >  1:3018064/1‑101 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            <  1:5684451/101‑1 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            >  1:4944371/1‑101 (MQ=255)
                       gTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTc                                                                          >  1:11358183/1‑101 (MQ=255)
                       gTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTc                                                                          <  1:1361144/101‑1 (MQ=255)
                       gTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTc                                                                          <  1:1897500/101‑1 (MQ=255)
                        tGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCt                                                                         >  1:10131410/1‑101 (MQ=255)
                          ccGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTaa                                                                       <  1:53732/101‑1 (MQ=255)
                            gTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATg                                                                     <  1:9324073/101‑1 (MQ=255)
                             tACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGa                                                                    >  1:4868359/1‑101 (MQ=255)
                              aCGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGaa                                                                   >  1:5851373/1‑101 (MQ=255)
                              aCGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGaa                                                                   >  1:5470338/1‑101 (MQ=255)
                               cGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGCAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAAc                                                                  >  1:3630821/1‑101 (MQ=255)
                                gCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACt                                                                 >  1:3889332/1‑101 (MQ=255)
                                 ccGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTg                                                                >  1:4212950/1‑101 (MQ=255)
                                 ccGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTg                                                                <  1:270962/101‑1 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              <  1:8147398/101‑1 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              >  1:9370948/1‑101 (MQ=255)
                                    tgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCGATTTCTAATGAACTGGGa                                                             <  1:7735322/101‑1 (MQ=255)
                                      tCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAtt                                                           >  1:2109167/1‑101 (MQ=255)
                                       cGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAttt                                                          <  1:7415248/101‑1 (MQ=255)
                                       cGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAttt                                                          >  1:7907035/1‑101 (MQ=255)
                                         aTTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTAc                                                        <  1:6867798/101‑1 (MQ=255)
                                         aTTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTAc                                                        >  1:3198072/1‑101 (MQ=255)
                                          tttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACt                                                       <  1:7830144/101‑1 (MQ=255)
                                          tttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACt                                                       >  1:8850743/1‑101 (MQ=255)
                                           ttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTg                                                      <  1:1543096/101‑1 (MQ=255)
                                            tCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGt                                                     >  1:3535492/1‑101 (MQ=255)
                                              gCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCa                                                   <  1:10508624/101‑1 (MQ=255)
                                                tttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAgg                                                 >  1:5822022/1‑101 (MQ=255)
                                                tttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAgg                                                 >  1:7466383/1‑101 (MQ=255)
                                                 ttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAggg                                                >  1:12150819/1‑101 (MQ=255)
                                                 ttCGACATCACGTCTGAAACAGGTGGAAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAggg                                                <  1:9654213/101‑1 (MQ=255)
                                                  tCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGa                                               >  1:4578282/1‑101 (MQ=255)
                                                   cGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGAt                                              >  1:1695491/1‑101 (MQ=255)
                                                    gACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATg                                             <  1:830661/101‑1 (MQ=255)
                                                    gACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATg                                             >  1:9856426/1‑101 (MQ=255)
                                                    gACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATg                                             >  1:2351533/1‑101 (MQ=255)
                                                     aCATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGa                                            <  1:10719779/101‑1 (MQ=255)
                                                      cATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGAc                                           >  1:4033396/1‑101 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:628748/101‑1 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:12220580/101‑1 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:225032/101‑1 (MQ=255)
                                                           cGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTggg                                      <  1:621295/101‑1 (MQ=255)
                                                            gTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgc                                     >  1:6413955/1‑101 (MQ=255)
                                                                   aCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATct                              >  1:1949523/1‑100 (MQ=255)
                                                                   aCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATca                              <  1:12079559/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAACCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            <  1:2958558/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTTTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            <  1:9457176/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            >  1:3321407/1‑101 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          >  1:10322063/1‑101 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          <  1:3686294/101‑1 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          >  1:7640739/1‑101 (MQ=255)
                                                                        tGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGCCCTGGGCGCGATCCCATaa                         <  1:10838890/101‑1 (MQ=255)
                                                                        tGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATaa                         <  1:293981/101‑1 (MQ=255)
                                                                          ggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACg                       <  1:5593066/101‑1 (MQ=255)
                                                                          ggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACg                       <  1:151075/101‑1 (MQ=255)
                                                                            agagaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCt                     >  1:6718351/1‑101 (MQ=255)
                                                                            agagaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCt                     >  1:9011069/1‑101 (MQ=255)
                                                                              agaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCttt                   <  1:9725692/101‑1 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGTATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  <  1:4470753/101‑1 (MQ=255)
                                                                                aaaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTgg                 <  1:11408020/101‑1 (MQ=255)
                                                                                aaaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTgg                 >  1:4273623/1‑101 (MQ=255)
                                                                                 aaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGa                <  1:9154023/101‑1 (MQ=255)
                                                                                 aaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGa                >  1:10582833/1‑101 (MQ=255)
                                                                                 aaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGa                >  1:8683014/1‑101 (MQ=255)
                                                                                  aaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGAc               <  1:11572986/101‑1 (MQ=255)
                                                                                    aTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACaa             >  1:3652385/1‑101 (MQ=255)
                                                                                    aTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACaa             <  1:11187330/101‑1 (MQ=255)
                                                                                    aTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACaa             >  1:6341413/1‑101 (MQ=255)
                                                                                     tctcCTGAAGCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAg            <  1:5916393/101‑1 (MQ=255)
                                                                                      ctcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGt           <  1:614401/101‑1 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          >  1:379378/1‑101 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACAGCGCAGGCTATTTCTAATGAACTGGGGTTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          >  1:10891963/1‑101 (MQ=255)
                                                                                        gtaaatcccAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGc         >  1:5233154/8‑101 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      <  1:3414255/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    <  1:7314012/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    <  1:7136159/101‑1 (MQ=255)
                                                                                              aCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAAc   <  1:4603075/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.