| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,669,599 | Δ1 bp | 100% | coding (680/1221 nt) | dgsA ← | DNA‑binding transcriptional repressor |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,669,599 | 0 | C→. | 100.0% | 3.0 | 265 | coding (680/1221 nt) | dgsA | DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): new base (131/132): ref base (2/0): total (133/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.98e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.46e-01 | ||||||||||
Only 100 of 284 total aligned reads displayed.
CCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATAT > NC_007779/1669499‑1669695 | cccGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgc > 1:4005144/1‑101 (MQ=255)cccGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgc > 1:9307747/1‑101 (MQ=255) ccGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgcc < 1:12073934/101‑1 (MQ=255) cAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgcc > 1:12892034/1‑98 (MQ=255) cAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgcc < 1:7226495/101‑4 (MQ=255) cAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgcc > 1:6432409/1‑98 (MQ=255) cAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgcc > 1:10779347/1‑98 (MQ=255) tAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGccccc < 1:2159064/101‑1 (MQ=255) cAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACg > 1:5812107/1‑101 (MQ=255) gCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGtt < 1:11689494/101‑1 (MQ=255) cGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtg > 1:7133672/1‑101 (MQ=255) cGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtg < 1:7583659/101‑1 (MQ=255) gTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtgt < 1:12313732/101‑1 (MQ=255) tttCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtgtg > 1:4611474/1‑101 (MQ=255) ttCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGa > 1:2448527/1‑101 (MQ=255) tCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGAt > 1:12466002/1‑101 (MQ=255) cccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATc > 1:10473528/1‑101 (MQ=255) ccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCg < 1:3621715/101‑1 (MQ=255) aTACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGAt > 1:640135/1‑101 (MQ=255) ngggTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCNCGNTGTGATCNATAac > 1:11790434/2‑101 (MQ=255) gggTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAacc < 1:1451177/101‑1 (MQ=255) ggTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAacca < 1:4780786/101‑1 (MQ=255) ggTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAacca > 1:9752687/1‑101 (MQ=255) gTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAaccac > 1:4348995/1‑101 (MQ=255) tCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAaccacc < 1:13907243/101‑1 (MQ=255) cGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCt < 1:7882555/101‑1 (MQ=255) gACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTg > 1:4706151/1‑101 (MQ=255) gACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTg > 1:14272430/1‑101 (MQ=255) cTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAAt < 1:2648457/101‑1 (MQ=255) tgtgtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATc < 1:1364516/101‑1 (MQ=255) tgtgtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATc > 1:6495696/1‑101 (MQ=255) gtgtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATca < 1:14932657/101‑1 (MQ=255) tgtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATcac < 1:4279020/101‑1 (MQ=255) gtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATcaca > 1:4945302/1‑101 (MQ=255) gtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATcaca < 1:5417993/101‑1 (MQ=255) tgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACAt < 1:3578402/101‑1 (MQ=255) tgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcg < 1:12564093/101‑1 (MQ=255) ggCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc < 1:1018634/101‑1 (MQ=255) gCCTATTTCGACGAGACTACTGCCGCCTGCGTGTAGCATATGACTATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcg < 1:11208632/101‑1 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcg < 1:5226394/101‑1 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcg < 1:1824166/101‑1 (MQ=255) ccTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcgc < 1:14647288/101‑1 (MQ=255) ccTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcgc < 1:4450176/101‑1 (MQ=255) ccTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgcgc < 1:11253572/101‑1 (MQ=255) tATTTCCACGTGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCgcgcgc > 1:14131869/1‑101 (MQ=255) tATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCgcgcgc > 1:13163541/1‑101 (MQ=255) aTTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCCCGTTGTGATCGATAACCACCTGAATCACCTCGGGCGcc > 1:9191519/1‑101 (MQ=255) aTTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGcc > 1:3539629/1‑101 (MQ=255) ttCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCC‑CCCCCACGTTGTGACCGATAACCACCTGAATCACATCGCGCGcccc > 1:13729271/1‑101 (MQ=255) ttCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGcccc > 1:7454954/1‑101 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCcg > 1:6755814/1‑101 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCcg < 1:11724791/101‑1 (MQ=255) aCGAGACTACTGCTGCCTTCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGt > 1:2933235/1‑101 (MQ=255) aCGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGt < 1:3863826/101‑1 (MQ=255) cGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTg < 1:5627663/101‑1 (MQ=255) cGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTg < 1:8032146/101‑1 (MQ=255) cGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTg < 1:12255381/101‑1 (MQ=255) cGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTg < 1:7378970/101‑1 (MQ=255) gagaCTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGa > 1:6104085/1‑101 (MQ=255) acttctGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGc < 1:7031304/101‑1 (MQ=255) actactGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGc < 1:10610803/101‑1 (MQ=255) actactGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGc > 1:15301425/1‑101 (MQ=255) actGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCC‑CCCCCCCGTTGGGATCGAAAACCCCCTGATTCCAATCGCGCCCCCCCCTGGAGGCAca > 1:9870584/1‑100 (MQ=255) actGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCAcc < 1:55483/101‑1 (MQ=255) tgctgcCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCaa < 1:7978079/101‑1 (MQ=255) tgctgcCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCaa > 1:4155687/1‑101 (MQ=255) ctgcctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAAc < 1:15387737/101‑1 (MQ=255) tgcctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACa < 1:15110716/101‑1 (MQ=255) cctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAg < 1:10821405/101‑1 (MQ=255) cctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAg < 1:10670689/101‑1 (MQ=255) ctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAgc > 1:8516922/1‑100 (MQ=255) tgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGc > 1:8222744/1‑101 (MQ=255) tgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGc > 1:15010049/1‑101 (MQ=255) cGTGTAGCAGATGACCATCGGTAATGACG‑TCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCct < 1:5077823/101‑1 (MQ=255) gtgtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCctc < 1:9368533/101‑1 (MQ=255) gtgtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCctc > 1:14578162/1‑101 (MQ=255) gtgtAGCAGATCACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCctc > 1:10379082/1‑101 (MQ=255) gtAGCAGATGACCCTCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTg < 1:6194400/101‑1 (MQ=255) tAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGc > 1:9808124/1‑101 (MQ=255) aGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATc < 1:9380267/101‑1 (MQ=255) aTGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGt < 1:4215967/101‑1 (MQ=255) tGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTc > 1:14380685/1‑101 (MQ=255) aCCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCa > 1:6340930/1‑101 (MQ=255) ccATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCAt < 1:2741445/101‑1 (MQ=255) cATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATg < 1:688359/101‑1 (MQ=255) cATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATg < 1:6666933/101‑1 (MQ=255) cATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATg > 1:12791272/1‑101 (MQ=255) cATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATg > 1:11478390/1‑101 (MQ=255) cATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATg > 1:15238479/1‑101 (MQ=255) cGGTAATGACG‑CCGCCCCCCCGTTGTGATCGATAACCACCTGAATCCCATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgcgc < 1:3054870/101‑1 (MQ=255) cGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgcgc > 1:3281068/1‑101 (MQ=255) cGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgcgc < 1:15185076/101‑1 (MQ=255) ggTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCt < 1:10143545/101‑1 (MQ=255) ggTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCt > 1:5937478/1‑101 (MQ=255) ggTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCt < 1:11119155/101‑1 (MQ=255) ggTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCt < 1:6554680/101‑1 (MQ=255) gTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTg < 1:13425582/101‑1 (MQ=255) aaTGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGat > 1:7798719/1‑101 (MQ=255) aTGACG‑CCGCCCCCACGTTGTGATTGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGata > 1:2318995/1‑101 (MQ=255) tGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGatat > 1:1307415/1‑101 (MQ=255) | CCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATAT > NC_007779/1669499‑1669695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |