New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3988379NA (NA)251 (1.030) 139/180 NT 100% coding (746/783 nt) yhiS hypothetical protein
?NC_007779 4009199 = 0 (0.000)coding (1375/1623 nt) yhiJ hypothetical protein

Only 100 of 649 total aligned reads displayed.

AACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACA  >  NC_007779/4009099‑4009299
                                                                                                    |                                                                                                    
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                      <  1:58925‑M2/1‑1 (MQ=255)
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                      >  1:359308‑M2/101‑101 (MQ=255)
ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct                                                                                                      >  1:1880671‑M2/101‑101 (MQ=255)
aagtAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGt                                                                                                      >  1:8770044/4‑101 (MQ=255)
 tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt                                                                                                     >  1:1216216‑M2/100‑101 (MQ=255)
 tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt                                                                                                     >  1:9253705‑M2/100‑101 (MQ=255)
 aCTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGtt                                                                                                     <  1:9333861/101‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    <  1:915152‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    <  1:11010463‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    >  1:2363894‑M2/99‑101 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    <  1:3485688‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    <  1:4039161‑M2/3‑1 (MQ=255)
  gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa                                                                                                    <  1:5291259‑M2/3‑1 (MQ=255)
  cTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTa                                                                                                    <  1:2909392/101‑1 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAg                                                                                                   >  1:9376804‑M2/98‑101 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAg                                                                                                   >  1:7636114‑M2/98‑101 (MQ=255)
   attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAg                                                                                                   >  1:4928858‑M2/98‑101 (MQ=255)
    ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAgg                                                                                                  <  1:7855725‑M2/5‑1 (MQ=255)
     tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTtagtg                                                                                                 <  1:1318430‑M2/6‑3 (MQ=255)
       cGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaa                                                                                               >  1:10010171‑M2/1‑98 (MQ=255)
       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaa                                                                                               <  1:9792127‑M2/8‑4 (MQ=255)
       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtat                                                                                               <  1:10932992‑M2/8‑1 (MQ=255)
        gggCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaag                                                                                              <  1:5781294‑M2/101‑5 (MQ=255)
        aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtata                                                                                              <  1:214888‑M2/9‑1 (MQ=255)
         ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaag                                                                                             >  1:10804143‑M2/92‑96 (MQ=255)
         ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATaa                                                                                             <  1:5415699‑M2/10‑1 (MQ=255)
         ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATaa                                                                                             <  1:2645630‑M2/10‑1 (MQ=255)
           catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAAt                                                                                           >  1:4513591‑M2/90‑101 (MQ=255)
           catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAAt                                                                                           >  1:8486331‑M2/90‑101 (MQ=255)
           cTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtg                                                                                           <  1:5180148‑M2/101‑8 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaagtta                                                                                          <  1:10126756‑M2/13‑9 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaagtta                                                                                          >  1:3104762‑M2/89‑93 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATc                                                                                          <  1:6008340‑M2/13‑1 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATc                                                                                          >  1:144502‑M2/89‑101 (MQ=255)
             tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaagttaa                                                                                         <  1:8279647‑M2/14‑10 (MQ=255)
             tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCa                                                                                         >  1:10628331‑M2/88‑101 (MQ=255)
              ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaagttaac                                                                                        >  1:9643633‑M2/87‑91 (MQ=255)
              ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCaa                                                                                        <  1:11507761‑M2/15‑1 (MQ=255)
               ttcttGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaa                                                                                       >  1:2260300‑M2/2‑90 (MQ=255)
               ctctTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaa                                                                                       <  1:7440604‑M2/101‑12 (MQ=255)
                 cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgtt                                                                                     >  1:6521791‑M2/84‑101 (MQ=255)
                  ttGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaa                                                                                    <  1:6764483‑M2/101‑15 (MQ=255)
                  gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgttg                                                                                    <  1:11626611‑M2/19‑1 (MQ=255)
                  gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgttg                                                                                    >  1:905658‑M2/83‑101 (MQ=255)
                        aTCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccct                                                                              >  1:4383196‑M2/1‑81 (MQ=255)
                         tCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctg                                                                             <  1:1691646‑M2/101‑22 (MQ=255)
                           cTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgat                                                                           <  1:7958831‑M2/101‑24 (MQ=255)
                           cTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgat                                                                           <  1:6820451‑M2/101‑24 (MQ=255)
                            tttAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgata                                                                          >  1:10445683‑M2/1‑77 (MQ=255)
                            atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATaa                                                                          >  1:4246028‑M2/73‑101 (MQ=255)
                              tAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatg                                                                        <  1:12074049‑M2/101‑27 (MQ=255)
                                aTCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgag                                                                      <  1:11954535‑M2/101‑29 (MQ=255)
                                 tCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgaga                                                                     >  1:7022778‑M2/1‑72 (MQ=255)
                                   caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAAt                                                                   >  1:10171396‑M2/66‑101 (MQ=255)
                                    ttATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatca                                                                  <  1:3222‑M2/101‑33 (MQ=255)
                                       tttttCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgt                                                               <  1:8603665‑M2/101‑36 (MQ=255)
                                           tCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                           <  1:9877500‑M2/101‑40 (MQ=255)
                                           aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAag                                                           <  1:2463789‑M2/44‑1 (MQ=255)
                                            cTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                          >  1:9738461‑M2/1‑61 (MQ=255)
                                             tGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                         >  1:7532353‑M2/1‑60 (MQ=255)
                                              aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAgaga                                                        <  1:1141534‑M2/47‑1 (MQ=255)
                                               tttCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                       >  1:6435486‑M2/1‑58 (MQ=255)
                                                  gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGc                                                    >  1:5481446‑M2/51‑101 (MQ=255)
                                                  gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGc                                                    >  1:11240832‑M2/51‑101 (MQ=255)
                                                      aGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                <  1:4847189‑M2/101‑51 (MQ=255)
                                                       gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAgg                                               <  1:3663090‑M2/56‑1 (MQ=255)
                                                        actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGc                                              >  1:6888981‑M2/45‑101 (MQ=255)
                                                        aTTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                              <  1:10327171‑M2/101‑53 (MQ=255)
                                                         ttACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                             >  1:818252‑M2/1‑48 (MQ=255)
                                                         ctgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCg                                             >  1:5073317‑M2/44‑101 (MQ=255)
                                                          tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGa                                            >  1:12249956‑M2/43‑101 (MQ=255)
                                                          tACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                            >  1:8336498‑M2/1‑47 (MQ=255)
                                                           gagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGaa                                           <  1:4142673‑M2/60‑1 (MQ=255)
                                                            agtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGaaa                                          <  1:5716732‑M2/61‑1 (MQ=255)
                                                             gtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAAc                                         <  1:4753754‑M2/62‑1 (MQ=255)
                                                                agccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACggg                                      >  1:6956‑M2/37‑101 (MQ=255)
                                                                 gccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACgggg                                     >  1:10710448‑M2/36‑101 (MQ=255)
                                                                  tAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                    >  1:1962891‑M2/1‑39 (MQ=255)
                                                                  ccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGa                                    <  1:6147743‑M2/67‑1 (MQ=255)
                                                                   cgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGAc                                   >  1:2786009‑M2/34‑101 (MQ=255)
                                                                   aaaCTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                   >  1:6346203‑M2/1‑38 (MQ=255)
                                                                          aaGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                            >  1:3387602‑M2/1‑31 (MQ=255)
                                                                           atttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAg                           >  1:7768098‑M2/26‑101 (MQ=255)
                                                                            gCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                          >  1:1170551‑M2/1‑29 (MQ=255)
                                                                              tccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTc                        >  1:2725940‑M2/23‑101 (MQ=255)
                                                                              aCTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                        >  1:11757623‑M2/1‑27 (MQ=255)
                                                                               ccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCt                       <  1:7125295‑M2/80‑1 (MQ=255)
                                                                                cccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCtt                      <  1:803485‑M2/81‑1 (MQ=255)
                                                                                 aTTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                     <  1:5556471‑M2/101‑78 (MQ=255)
                                                                                  cgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTaa                    >  1:8942662‑M2/19‑101 (MQ=255)
                                                                                  cgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTaa                    <  1:7256366‑M2/83‑1 (MQ=255)
                                                                                   gcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAAc                   >  1:10534834‑M2/18‑101 (MQ=255)
                                                                                    cttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACg                  <  1:5651637‑M2/85‑1 (MQ=255)
                                                                                      tattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGcc                >  1:2046534‑M2/15‑101 (MQ=255)
                                                                                         tcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGt             <  1:1516196‑M2/90‑1 (MQ=255)
                                                                                          cgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTg            >  1:5024921‑M2/11‑101 (MQ=255)
                                                                                            caccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGAc          >  1:4599967‑M2/9‑101 (MQ=255)
                                                                                              caAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc        <  1:2990551‑M2/101‑91 (MQ=255)
                                                                                                   cTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAc   >  1:6644762‑M2/2‑101 (MQ=255)
                                                                                                    ttAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACa  <  1:3776345/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
AACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACA  >  NC_007779/4009099‑4009299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.