BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 2412225	NA (NA)	4 (0.020)	4/180	NT	1.8%	intergenic (‑55/‑782)	insA/yfbQ	IS1 element protein/aminotransferase
*	?	NC_007779	3183921 =	216 (0.890)	4 (0.020)	4/180	NT	1.8%	intergenic (+135/‑149)	yqiC/ygiL	hypothetical protein/fimbrial‑like adhesin protein

Only 100 of 242 total aligned reads displayed.

AATCCTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAA  >  NC_007779/3183821‑3184020

  tCCTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTa                                                                                                   <  1:4816014/101‑1 (MQ=255)

   ccTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAt                                                                                                  >  1:9652425/1‑101 (MQ=255)

   ccTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAt                                                                                                  <  1:8886360/101‑1 (MQ=255)

   ccTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAt                                                                                                  <  1:4857370/101‑1 (MQ=255)

    ctctAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAtt                                                                                                 <  1:10025853/101‑1 (MQ=255)

     tctAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAttt                                                                                                <  1:11865450/101‑1 (MQ=255)

       tAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAttttt                                                                                              >  1:12276235/1‑101 (MQ=255)

       tAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTAttttt                                                                                              >  1:12182025/1‑101 (MQ=255)

         aTTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTa                                                                                            <  1:5050917/101‑1 (MQ=255)

          tttATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTaa                                                                                           <  1:9943466/101‑1 (MQ=255)

          tttATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTaa                                                                                           <  1:10812005/101‑1 (MQ=255)

           ttATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAg                                                                                          <  1:9268721/101‑1 (MQ=255)

           ttATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAg                                                                                          <  1:1237092/101‑1 (MQ=255)

           ttATAGTGCTGTCTATTACCTTATCGCGTAATCCCATTCAGAAAAGCATCACAAAAATGCATGAGAACAATTGAGAGTATAATTGAAATGAATTTTTTAAg                                                                                          >  1:6783546/1‑101 (MQ=255)

            tataGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGt                                                                                         <  1:1893980/101‑1 (MQ=255)

             ataGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGtt                                                                                        >  1:8169506/1‑101 (MQ=255)

             ataGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGtt                                                                                        >  1:8759160/1‑101 (MQ=255)

               aGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGtttt                                                                                      >  1:11150399/1‑101 (MQ=255)

               aGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGtttt                                                                                      >  1:1976492/1‑101 (MQ=255)

               aGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGtttt                                                                                      <  1:9169513/101‑1 (MQ=255)

                gTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTa                                                                                     >  1:9549738/1‑101 (MQ=255)

                gTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTa                                                                                     <  1:7569250/101‑1 (MQ=255)

                   cTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACtt                                                                                  <  1:7741898/101‑1 (MQ=255)

                   cTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGACTACGATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACtt                                                                                  >  1:11392714/1‑101 (MQ=255)

                      tCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAAt                                                                               <  1:1685499/101‑1 (MQ=255)

                        tATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCg                                                                             <  1:7513306/101‑1 (MQ=255)

                        tATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCg                                                                             >  1:9894153/1‑101 (MQ=255)

                              cTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATAttt                                                                       >  1:6423870/1‑101 (MQ=255)

                              agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTATTTTTTAAGTTTTACTTAATCGATAttt                                                                       <  1:9378516‑M2/31‑1 (MQ=255)

                               ttATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTa                                                                      >  1:5892312/1‑101 (MQ=255)

                               ttATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTa                                                                      <  1:4722640/101‑1 (MQ=255)

                                tATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAg                                                                     >  1:8146903/1‑101 (MQ=255)

                                tATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAg                                                                     >  1:9351732/1‑101 (MQ=255)

                                tATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAg                                                                     <  1:9643570/101‑1 (MQ=255)

                                 aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGTATTTTTTAAGTTTTACTTAATCGATATTTAGa                                                                    <  1:11896073‑M2/34‑1 (MQ=255)

                                 aTCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGa                                                                    <  1:1488103/101‑1 (MQ=255)

                                   cgcgTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATa                                                                  <  1:11924884/101‑1 (MQ=255)

                                   cgcgTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATa                                                                  >  1:7705345/1‑101 (MQ=255)

                                   cgcgTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAACGTATTTTTTAAGTTTTACTTAATCGATATTTAGATa                                                                  <  1:7155112/101‑1 (MQ=255)

                                     cgTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATaaa                                                                <  1:1046645/101‑1 (MQ=255)

                                      gTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAAc                                                               >  1:8083572/1‑101 (MQ=255)

                                           cccATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAAtt                                                          <  1:5759006/101‑1 (MQ=255)

                                            ccATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAAttt                                                         >  1:11798021/1‑101 (MQ=255)

                                               ttCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTtat                                                      <  1:9700195/101‑1 (MQ=255)

                                                tCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTtata                                                     <  1:3600379/101‑1 (MQ=255)

                                                 cAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaa                                                    <  1:5840849/101‑1 (MQ=255)

                                                 cAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaa                                                    <  1:775354/101‑1 (MQ=255)

                                                  aGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaa                                                   <  1:3208414/101‑1 (MQ=255)

                                                  aGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaa                                                   <  1:7332962/101‑1 (MQ=255)

                                                  aGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaa                                                   <  1:8133714/101‑1 (MQ=255)

                                                   gAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaaa                                                  <  1:2573999/101‑1 (MQ=255)

                                                    aaaaCCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaaaa                                                 >  1:11742383/1‑101 (MQ=255)

                                                     aaaCCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATaaaaaa                                                <  1:2077745/101‑1 (MQ=255)

                                                      aaCCATGACAAAAATGAATGAGTACAATTGAAAGTATAATTACAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAac                                               >  1:10896384/1‑101 (MQ=255)

                                                      aaCCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAac                                               <  1:11981479/101‑1 (MQ=255)

                                                       aCCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAaca                                              >  1:10140764/1‑101 (MQ=255)

                                                        ccATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAacac                                             >  1:7108097/1‑101 (MQ=255)

                                                         cATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAAcaca                                            <  1:7087551/101‑1 (MQ=255)

                                                         cATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAAcaca                                            <  1:1108388/101‑1 (MQ=255)

                                                          aTCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaa                                           <  1:8387256/101‑1 (MQ=255)

                                                              caAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaata                                       <  1:2070978/101‑1 (MQ=255)

                                                               aaaaaTGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaataa                                      <  1:5363649/101‑1 (MQ=255)

                                                               aaaaaTGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaataa                                      <  1:10699938/101‑1 (MQ=255)

                                                                 aaaTGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaataaaa                                    <  1:10271394/101‑1 (MQ=255)

                                                                  aatgaatgAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaataaaat                                   <  1:6683948/101‑1 (MQ=255)

                                                                  aatgaatgAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACaaaataaaat                                   <  1:6961031/101‑1 (MQ=255)

                                                                    tgaatgaGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAatat                                 >  1:3911517/1‑101 (MQ=255)

                                                                    tgaatgaGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAatat                                 <  1:7205124/101‑1 (MQ=255)

                                                                      aatgaGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCa                               <  1:3732488/101‑1 (MQ=255)

                                                                          aGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATAtt                           >  1:9712268/1‑101 (MQ=255)

                                                                          aGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATAtt                           <  1:5692867/101‑1 (MQ=255)

                                                                           gTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATAttt                          <  1:4557983/101‑1 (MQ=255)

                                                                           gTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATAttt                          <  1:7820329/101‑1 (MQ=255)

                                                                            tACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTc                         <  1:11411543/101‑1 (MQ=255)

                                                                            tACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCAATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTc                         <  1:5298980/101‑1 (MQ=255)

                                                                             aCAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCa                        <  1:7045190/101‑1 (MQ=255)

                                                                              cAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCaa                       >  1:7896888/1‑101 (MQ=255)

                                                                              cAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCaa                       <  1:2692932/101‑1 (MQ=255)

                                                                               aaTTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAAt                      >  1:8251895/1‑101 (MQ=255)

                                                                                aTTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATg                     <  1:6147491/101‑1 (MQ=255)

                                                                                aTTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATg                     <  1:11704495/101‑1 (MQ=255)

                                                                                 ttGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGa                    >  1:3112215/1‑101 (MQ=255)

                                                                                 ttGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGa                    <  1:10200009/101‑1 (MQ=255)

                                                                                 ttGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGa                    <  1:4210325/101‑1 (MQ=255)

                                                                                 ttGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGa                    <  1:8928662/101‑1 (MQ=255)

                                                                                  tGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGAt                   >  1:11863218/1‑101 (MQ=255)

                                                                                     aaGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtag                <  1:5499767/101‑1 (MQ=255)

                                                                                      aGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtagt               <  1:10993216/101‑1 (MQ=255)

                                                                                       gTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtagta              <  1:11325301/101‑1 (MQ=255)

                                                                                       gTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtagta              >  1:10597760/1‑101 (MQ=255)

                                                                                        tataATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtagtag             <  1:12133622/101‑1 (MQ=255)

                                                                                        tataATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATtagtag             >  1:7401424/1‑101 (MQ=255)

                                                                                         ataATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTagtagt            <  1:4924434/101‑1 (MQ=255)

                                                                                         ataATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTagtagt            >  1:4279729/1‑101 (MQ=255)

                                                                                               gCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTaa      <  1:1734925/101‑1 (MQ=255)

                                                                                               gCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTaa      <  1:1421842/101‑1 (MQ=255)

                                                                                                cAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTaaa     >  1:1926088/1‑101 (MQ=255)

                                                                                                cAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTaaa     >  1:8663675/1‑101 (MQ=255)

                                                                                                 aaTGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAAt    <  1:3345090/101‑1 (MQ=255)

                                                                                                 aaTGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAAt    >  1:5954016/1‑101 (MQ=255)

AATCCTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAA  >  NC_007779/3183821‑3184020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.