Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 569,996 G→C 100% intergenic (+345/‑120) ybcK → / → ybcL recombinase/kinase inhibitor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_007779569,9960G→C100.0% 1050.3 236intergenic (+345/‑120)ybcK/ybcLrecombinase/kinase inhibitor
Reads supporting (aligned to +/- strand):  new base (106/130):  ref base (0/0):  total (106/130)

Only 100 of 238 total aligned reads displayed.

TTGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGGCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAT  >  NC_007779/569898‑570093
                                                                                                  |                                                                                                 
ttGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCa                                                                                                 <  1:3583901/101‑1 (MQ=255)
ttGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCa                                                                                                 >  1:7157569/1‑101 (MQ=255)
 tGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATCGTATCAATGTGCTTTGTGTATATTGTGCCaa                                                                                                <  1:8588622/101‑1 (MQ=255)
  gAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCaaa                                                                                               <  1:5596157/101‑1 (MQ=255)
  gAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCaaa                                                                                               <  1:7721076/101‑1 (MQ=255)
   aaTGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaat                                                                                              >  1:8809178/1‑101 (MQ=255)
    aTGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaata                                                                                             <  1:9874526/101‑1 (MQ=255)
    aTGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaata                                                                                             <  1:12079626/101‑1 (MQ=255)
      ggTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAaataat                                                                                           >  1:6965601/1‑101 (MQ=255)
        tAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttg                                                                                         <  1:11137506/101‑1 (MQ=255)
        tAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttg                                                                                         <  1:7050420/101‑1 (MQ=255)
         aGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgg                                                                                        <  1:12260101/101‑1 (MQ=255)
         aGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGCATATTGTGCCAAATAAttgg                                                                                        <  1:971674/101‑1 (MQ=255)
          ggTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttggg                                                                                       >  1:6604222/1‑101 (MQ=255)
          ggTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttggg                                                                                       >  1:7444441/1‑101 (MQ=255)
           gTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggt                                                                                      >  1:7234182/1‑101 (MQ=255)
           gTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggt                                                                                      <  1:9690562/101‑1 (MQ=255)
            ttAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggtt                                                                                     >  1:9940372/1‑101 (MQ=255)
             tAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAAttgggttg                                                                                    <  1:6215623/101‑1 (MQ=255)
                 aaaTAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTggggg                                                                                <  1:5977287/101‑1 (MQ=255)
                  aaTAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGt                                                                               <  1:8440100/101‑1 (MQ=255)
                    tAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTAc                                                                             >  1:3891796/1‑101 (MQ=255)
                     aaCACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACa                                                                            <  1:11376634/101‑1 (MQ=255)
                     aaCACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACa                                                                            <  1:9050542/101‑1 (MQ=255)
                     aaCACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACa                                                                            >  1:9146384/1‑101 (MQ=255)
                      acacCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACaa                                                                           <  1:11644489/101‑1 (MQ=255)
                       cacCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAAt                                                                          <  1:8862474/101‑1 (MQ=255)
                           gACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATtgtg                                                                      >  1:8988298/1‑101 (MQ=255)
                           gACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATtgtg                                                                      >  1:10013048/1‑101 (MQ=255)
                            aCTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGa                                                                     >  1:7521436/1‑101 (MQ=255)
                            aCTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGa                                                                     >  1:11820497/1‑101 (MQ=255)
                             cTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAt                                                                    <  1:1470073/101‑1 (MQ=255)
                              tttCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAtt                                                                   >  1:5387856/1‑101 (MQ=255)
                              tttCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAtt                                                                   <  1:10985587/101‑1 (MQ=255)
                              tttCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGAtt                                                                   <  1:6030828/101‑1 (MQ=255)
                                  gTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtt                                                               <  1:3464024/101‑1 (MQ=255)
                                   tAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCttt                                                              >  1:11021205/1‑101 (MQ=255)
                                    aGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCtttt                                                             <  1:7041033/101‑1 (MQ=255)
                                     ggTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCttttt                                                            >  1:6706867/1‑100 (MQ=255)
                                     ggTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTg                                                            <  1:10227560/101‑1 (MQ=255)
                                       tgtTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCa                                                          <  1:50022/101‑1 (MQ=255)
                                          tACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGa                                                       >  1:11491557/1‑101 (MQ=255)
                                          tACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGa                                                       >  1:7629881/1‑101 (MQ=255)
                                           aCTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGaa                                                      >  1:8268590/1‑101 (MQ=255)
                                            cTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAAc                                                     <  1:1448628/101‑1 (MQ=255)
                                             taataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACa                                                    >  1:6249921/1‑101 (MQ=255)
                                             taataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACa                                                    >  1:10596691/1‑101 (MQ=255)
                                             taataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACa                                                    >  1:10501202/1‑101 (MQ=255)
                                              ataaataaAGCAAATTTTTAAGATAGTATCAATGTTCTTGTTTTATATTTTCCCAAATAATTGGGTTGGGGTACAATTGTGATTGCTTTTGCATGAGCAtt                                                  <  1:8107310/98‑1 (MQ=255)
                                              aataataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACAt                                                   >  1:633399/1‑101 (MQ=255)
                                               ataataaAGCAGAGNNNNNNNNNNNTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACAtt                                                  <  1:8368222/101‑1 (MQ=255)
                                                taataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTg                                                 >  1:8202081/1‑101 (MQ=255)
                                                 aataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgc                                                >  1:2528918/1‑101 (MQ=255)
                                                  ataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgcg                                               <  1:2059682/101‑1 (MQ=255)
                                                  ataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgcg                                               >  1:1033932/1‑101 (MQ=255)
                                                  ataaAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTgcg                                               >  1:8027972/1‑101 (MQ=255)
                                                     aaGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCt                                            >  1:5070880/1‑101 (MQ=255)
                                                       gCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCttt                                          <  1:11456604/101‑1 (MQ=255)
                                                       gCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCttt                                          <  1:1073883/101‑1 (MQ=255)
                                                        cAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTa                                         <  1:5037405/101‑1 (MQ=255)
                                                        cAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTa                                         >  1:4910637/1‑101 (MQ=255)
                                                        cAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTa                                         <  1:5730702/101‑1 (MQ=255)
                                                         agagTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTAt                                        <  1:5785918/101‑1 (MQ=255)
                                                           agTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGc                                      <  1:11264756/101‑1 (MQ=255)
                                                             tttttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCAt                                    <  1:330631/101‑1 (MQ=255)
                                                              ttttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATa                                   <  1:4932684/101‑1 (MQ=255)
                                                               tttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATaa                                  >  1:3296928/1‑101 (MQ=255)
                                                                ttAGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAAt                                 <  1:3203657/101‑1 (MQ=255)
                                                                  aGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATga                               <  1:1876609/101‑1 (MQ=255)
                                                                  aGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATga                               <  1:1324655/101‑1 (MQ=255)
                                                                  aGATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATga                               <  1:2993291/101‑1 (MQ=255)
                                                                   gATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgag                              >  1:6399458/1‑101 (MQ=255)
                                                                   gATAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgag                              <  1:4484258/101‑1 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             <  1:2114810/101‑1 (MQ=255)
                                                                    aTAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATgaga                             <  1:3952097/101‑1 (MQ=255)
                                                                     tAGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGAt                            >  1:3832032/1‑101 (MQ=255)
                                                                      aGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATa                           <  1:10047595/101‑1 (MQ=255)
                                                                      aGTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATa                           <  1:12012919/101‑1 (MQ=255)
                                                                       gTATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATaa                          <  1:3528711/101‑1 (MQ=255)
                                                                        tATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATaaa                         >  1:9452460/1‑101 (MQ=255)
                                                                        tATCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATaaa                         <  1:5283211/101‑1 (MQ=255)
                                                                          tCAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAgg                       <  1:2878428/101‑1 (MQ=255)
                                                                           cAATGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGa                      <  1:5178726/101‑1 (MQ=255)
                                                                             aTGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAat                    >  1:4130751/1‑101 (MQ=255)
                                                                             aTGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAat                    <  1:3722037/101‑1 (MQ=255)
                                                                             aTGTGCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAat                    >  1:10697575/1‑101 (MQ=255)
                                                                              tgtgCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAata                   <  1:791278/101‑1 (MQ=255)
                                                                                 gCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCa                <  1:118872/101‑1 (MQ=255)
                                                                                 gCTTTGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCa                <  1:5507952/101‑1 (MQ=255)
                                                                                   tttGTGTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaa              >  1:4314830/1‑101 (MQ=255)
                                                                                     tgtgTATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaata            <  1:4656184/101‑1 (MQ=255)
                                                                                       tgtATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaa          >  1:7849753/1‑101 (MQ=255)
                                                                                        gtATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaatgaaa         >  1:8456547/1‑101 (MQ=255)
                                                                                        gtATATTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaa         <  1:3039854/101‑1 (MQ=255)
                                                                                         tataTTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaat        >  1:6745458/1‑101 (MQ=255)
                                                                                          atatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAGAGGAATATCaaataaaata       <  1:11800321/101‑1 (MQ=255)
                                                                                          atatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCaaataaaata       <  1:8538736/101‑1 (MQ=255)
                                                                                           tatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAaataaaataa      <  1:9585995/101‑1 (MQ=255)
                                                                                           tatTGTGCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAaataaaataa      <  1:11348291/101‑1 (MQ=255)
                                                                                              tgtgCCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGa   <  1:2295634/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TTGAATGGTAGGTTAAAAAATAACACCGACTTTCGTAGGTGTTACTAATAATAAAGCAGAGTTTTTAGATAGTATCAATGTGCTTTGTGTATATTGTGGCAAATAATTGGGTTGGGGGTACAATTGTGATTGCTTTTGCATGAACATTGCGCCTTTATGCATAATGAGATAAAGGAATATCAAATAAAATAACGAT  >  NC_007779/569898‑570093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.