New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 290625NA (NA)346 (1.440) 146/180 NT 56.9% intergenic (‑55/‑99) insA/yagJ IS1 repressor protein InsA/hypothetical protein
?NC_007779 678240 = 262 (1.090)coding (404/1428 nt) djlB chaperone

Only 100 of 713 total aligned reads displayed.

TATTGCTCGATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTC  >  NC_007779/678140‑678340
                                                                                                    |                                                                                                    
tattGCTCGATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGa                                                                                                      >  1:6661575/1‑101 (MQ=255)
gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca                                                                                                      >  1:7064590‑M2/101‑101 (MQ=255)
 tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaa                                                                                                     <  1:4540436‑M2/2‑1 (MQ=255)
 tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaa                                                                                                     <  1:3923184‑M2/2‑1 (MQ=255)
  cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaa                                                                                                    >  1:7890024‑M2/99‑101 (MQ=255)
  cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaaa                                                                                                    <  1:11644320‑M2/3‑1 (MQ=255)
      agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGAtt                                                                                                >  1:10250167‑M2/95‑101 (MQ=255)
       gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTg                                                                                               >  1:6888989‑M2/94‑101 (MQ=255)
        gATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGc                                                                                              >  1:3553066/1‑101 (MQ=255)
         aTGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGGGCGGGGTGTTATTAGCAGAAAGATTGCg                                                                                             >  1:11165490/1‑101 (MQ=255)
          gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCgg                                                                                            >  1:7797689‑M2/91‑101 (MQ=255)
           ggaggaGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCggt                                                                                           >  1:5410695/1‑101 (MQ=255)
           aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCggt                                                                                           <  1:5035404‑M2/12‑1 (MQ=255)
            acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCggtg                                                                                          >  1:1694091‑M2/89‑101 (MQ=255)
             aggagATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCggtgg                                                                                         <  1:4184046/101‑1 (MQ=255)
               ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGtt                                                                                       <  1:11327870‑M2/16‑1 (MQ=255)
               gagaTTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGtt                                                                                       <  1:3818812/101‑1 (MQ=255)
                 gaTTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTAc                                                                                     <  1:2035290/101‑1 (MQ=255)
                  gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACa                                                                                    <  1:11470255‑M2/19‑1 (MQ=255)
                  aTTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACa                                                                                    <  1:8667397/101‑1 (MQ=255)
                     acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACagga                                                                                 <  1:7337020‑M2/22‑1 (MQ=255)
                        gaATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAggagga                                                                              <  1:6758425/101‑1 (MQ=255)
                         ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGaa                                                                             <  1:4438052‑M2/26‑1 (MQ=255)
                         aaTTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGaa                                                                             <  1:10492040/101‑1 (MQ=255)
                          tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGaaa                                                                            >  1:10907917‑M2/75‑101 (MQ=255)
                                cTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCg                                                                      >  1:1327789/1‑101 (MQ=255)
                                 aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCgg                                                                     >  1:5755730‑M2/68‑101 (MQ=255)
                                  ggTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCggg                                                                    <  1:961769/101‑1 (MQ=255)
                                   gTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCgggg                                                                   <  1:4285788/101‑1 (MQ=255)
                                   gTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCgggg                                                                   >  1:247171/1‑101 (MQ=255)
                                   cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCgggg                                                                   <  1:1063209‑M2/36‑1 (MQ=255)
                                    agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGATTACAGGAGGAAAATACCGGGGa                                                                  <  1:3062494‑M2/37‑1 (MQ=255)
                                     cGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGaa                                                                 >  1:8384110/1‑101 (MQ=255)
                                      gCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGaaa                                                                <  1:938232/101‑1 (MQ=255)
                                      gCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGaaa                                                                <  1:2823261/101‑1 (MQ=255)
                                      aagccactggagcacctcaaaaacgccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGaaa                                                                <  1:3430807‑M2/39‑1 (MQ=255)
                                        gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATa                                                              >  1:6198933‑M2/61‑101 (MQ=255)
                                          tgCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGa                                                            >  1:2211077/1‑101 (MQ=255)
                                              caATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaa                                                        >  1:1825040/1‑101 (MQ=255)
                                              caATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaa                                                        <  1:3723555/101‑1 (MQ=255)
                                               gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaag                                                       <  1:8999491‑M2/48‑1 (MQ=255)
                                               gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaag                                                       >  1:10009793‑M2/54‑101 (MQ=255)
                                               aaTCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaag                                                       >  1:7541450/1‑101 (MQ=255)
                                                 gcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaa                                                     <  1:11703380‑M2/50‑1 (MQ=255)
                                                  cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaag                                                    >  1:71139‑M2/51‑101 (MQ=255)
                                                  cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaag                                                    <  1:4699197‑M2/51‑1 (MQ=255)
                                                  cGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaag                                                    >  1:1593951/1‑101 (MQ=255)
                                                    cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaagaa                                                  <  1:6932954‑M2/53‑1 (MQ=255)
                                                    cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACgaagaagaa                                                  <  1:8786166‑M2/53‑1 (MQ=255)
                                                     cATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAAc                                                 <  1:9304758/101‑1 (MQ=255)
                                                       tGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTg                                               >  1:5118255/1‑101 (MQ=255)
                                                       caaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTg                                               <  1:2967069‑M2/56‑1 (MQ=255)
                                                          aaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGaa                                            >  1:4034135‑M2/43‑101 (MQ=255)
                                                          aaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGaa                                            <  1:4357772‑M2/59‑1 (MQ=255)
                                                          aaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGaa                                            >  1:4771843‑M2/43‑101 (MQ=255)
                                                           cacTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAAt                                           <  1:12264655/101‑1 (MQ=255)
                                                           aacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAAt                                           >  1:4114496‑M2/42‑101 (MQ=255)
                                                           aacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAAt                                           <  1:6083710‑M2/60‑1 (MQ=255)
                                                              accatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCt                                        >  1:2093910‑M2/39‑101 (MQ=255)
                                                               ccatcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCtt                                       <  1:2645724‑M2/64‑1 (MQ=255)
                                                                  tcatacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCttttt                                    <  1:2304954‑M2/67‑1 (MQ=255)
                                                                  cATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCttttt                                    <  1:9100324/101‑1 (MQ=255)
                                                                   catacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTta                                   >  1:7641378‑M2/34‑101 (MQ=255)
                                                                    atacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTtat                                  <  1:8502974‑M2/69‑1 (MQ=255)
                                                                    atacactaaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTtat                                  <  1:10084729‑M2/69‑1 (MQ=255)
                                                                     ttATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTtata                                 <  1:1972400/101‑1 (MQ=255)
                                                                     ttATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTtata                                 <  1:2559070/101‑1 (MQ=255)
                                                                      tATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTatat                                >  1:5542493/1‑101 (MQ=255)
                                                                        tCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGc                              <  1:1197511/101‑1 (MQ=255)
                                                                          taaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCa                            >  1:6352483‑M2/27‑101 (MQ=255)
                                                                           ttCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCAt                           >  1:4897892/1‑101 (MQ=255)
                                                                           aaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCAt                           <  1:74549‑M2/76‑1 (MQ=255)
                                                                           aaatcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCAt                           <  1:1035224‑M2/76‑1 (MQ=255)
                                                                            tCGAGTGCGTAGTGTTATTATCAGGTATTTTTCGGTTTTTACAGGAGGAAAATCCCGGGGAAATAGACTAAGAAGAGCTGGAAGCCTTTTTATATGCCAtt                          <  1:7187172/101‑1 (MQ=255)
                                                                             atcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTg                         <  1:10428694‑M2/78‑1 (MQ=255)
                                                                             atcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTg                         <  1:3232135‑M2/78‑1 (MQ=255)
                                                                             atcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTg                         >  1:52486‑M2/24‑101 (MQ=255)
                                                                              tcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGc                        <  1:11824753‑M2/79‑1 (MQ=255)
                                                                              tcagtaagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGc                        <  1:6580946‑M2/79‑1 (MQ=255)
                                                                              gAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGc                        <  1:1481366/101‑1 (MQ=255)
                                                                               aGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCg                       <  1:2911341/101‑1 (MQ=255)
                                                                                gTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGa                      >  1:3621801/1‑101 (MQ=255)
                                                                                 tGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGaa                     <  1:9885473/101‑1 (MQ=255)
                                                                                 tGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGaa                     >  1:9518511/1‑101 (MQ=255)
                                                                                  taagttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAg                    <  1:11591635‑M2/83‑1 (MQ=255)
                                                                                    agttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAggg                  <  1:12115617‑M2/85‑1 (MQ=255)
                                                                                     gttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAGCTGGAATCCTTTTTATATGCCATTGCGAAgggg                 >  1:1389138‑M2/16‑101 (MQ=255)
                                                                                     gttggcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAgggg                 >  1:9241590‑M2/16‑101 (MQ=255)
                                                                                         gcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATg             <  1:1659518‑M2/90‑1 (MQ=255)
                                                                                         gcagcatcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATg             <  1:2763437‑M2/90‑1 (MQ=255)
                                                                                             ttaGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGtttt         >  1:240166/1‑101 (MQ=255)
                                                                                              taGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGttttt        >  1:8568873/1‑101 (MQ=255)
                                                                                              atcaccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGttttt        >  1:8889893‑M2/7‑101 (MQ=255)
                                                                                                caccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTaa      <  1:10817688‑M2/97‑1 (MQ=255)
                                                                                                caccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTaa      >  1:5921548‑M2/5‑101 (MQ=255)
                                                                                                 accAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAAc     <  1:9754143‑M2/98‑1 (MQ=255)
                                                                                                  ccAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACt    <  1:8003374‑M2/99‑1 (MQ=255)
                                                                                                   gAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACtt   >  1:11051791/1‑101 (MQ=255)
                                                                                                   cAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACtt   <  1:6493683‑M2/100‑1 (MQ=255)
                                                                                                    aaaGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGCTTTTAACTTc  <  1:8145261/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TATTGCTCGATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTC  >  NC_007779/678140‑678340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.