BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 1672780	0 (0.000)	218 (0.910)	109/180	NT	100%	intergenic (+114/‑310)	ynfM/asr	transporter/acid shock‑inducible periplasmic protein
*	?	NC_007779	1980209 =	NA (NA)	218 (0.910)	109/180	NT	100%	intergenic (‑289/+146)	flhD/insH	DNA‑binding transcriptional dual regulator/IS5 element protein

Only 100 of 183 total aligned reads displayed.

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304

cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaag                                                                                                 <  1:7515303/101‑1 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaagg                                                                                                >  1:3381192/1‑101 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaagg                                                                                                <  1:11708477/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                               <  1:9161946/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                               <  1:810668/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                               <  1:3036326/101‑1 (MQ=255)

   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                              <  1:9836766/101‑1 (MQ=255)

     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAACACACTCAATTACTTaaggaagg                                                                                            <  1:11028440/101‑1 (MQ=255)

     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaagg                                                                                            <  1:2913071/101‑1 (MQ=255)

     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaagg                                                                                            >  1:1005387/1‑101 (MQ=255)

     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAAAACTCAATTACTTaaggaagg                                                                                            >  1:4545099/1‑101 (MQ=255)

      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGt                                                                                           <  1:1160010/101‑1 (MQ=255)

       aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTg                                                                                          <  1:3913076/101‑1 (MQ=255)

        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                         <  1:4553795/101‑1 (MQ=255)

        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                         <  1:1952595/101‑1 (MQ=255)

            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                     <  1:4979043/101‑1 (MQ=255)

            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                     >  1:3493946/1‑101 (MQ=255)

            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                     <  1:7562035/101‑1 (MQ=255)

             cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTCAGGAAGGTGAGAATa                                                                                    >  1:6573757/1‑101 (MQ=255)

               cGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAg                                                                                  >  1:3056720/1‑101 (MQ=255)

                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGc                                                                                 <  1:5344333/101‑1 (MQ=255)

                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGc                                                                                 <  1:5384147/101‑1 (MQ=255)

                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGc                                                                                 <  1:12035582/101‑1 (MQ=255)

                 tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCg                                                                                >  1:790611/1‑101 (MQ=255)

                 tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCg                                                                                >  1:3383877/1‑101 (MQ=255)

                  cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCgg                                                                               >  1:9617734/1‑101 (MQ=255)

                     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGa                                                                            >  1:6769550/1‑101 (MQ=255)

                     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGa                                                                            >  1:9801122/1‑101 (MQ=255)

                        acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAt                                                                         >  1:4348421/1‑101 (MQ=255)

                         cGCACATGCAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAtt                                                                        <  1:3725854/101‑1 (MQ=255)

                         cGCACATACAACGGGGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACAAAAAACCCTCAATTACTTAAGGAAGGTGCAAATAAGCGGGGAAAtt                                                                        <  1:8921145/101‑1 (MQ=39)

                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttc                                                                       <  1:1672647/101‑1 (MQ=255)

                          caaaaTACAGGGGGGGGGGGCTG‑AATTTTCAAAAATGGAGTGATAAAAACCACAAAAACCACTCAATTACTAAGGGAGGGTGCAAATAAGCGGGGAAAttc                                                                       <  1:93725/97‑1 (MQ=255)

                           cacaTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACAAAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttct                                                                      <  1:11399527/101‑1 (MQ=255)

                            acaTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                     >  1:7964377/1‑101 (MQ=255)

                             caTACAACGGAGGGTGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttcttc                                                                    <  1:12154434/101‑1 (MQ=255)

                             caTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttcttc                                                                    <  1:4828176/101‑1 (MQ=255)

                              aTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                   >  1:10901612/1‑101 (MQ=255)

                              aTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                   >  1:7270724/1‑101 (MQ=255)

                              aTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACCCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                   <  1:6476800/101‑1 (MQ=255)

                              aTACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGGGATGCAGGTCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                   >  1:4074463/1‑101 (MQ=255)

                               tACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                  <  1:9737590/101‑1 (MQ=255)

                               tACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                  >  1:2354998/1‑101 (MQ=255)

                               tACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTT‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg                                                                 >  1:11755549/1‑101 (MQ=255)

                                 cAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                                >  1:1318573/1‑101 (MQ=255)

                                   aCGGAGGGGGCCTGGGATTTTCAATAAT‑GCGTGAGGCAGATCACACAAAACACTCAATTACTTAGGGAAGGTGGGAATTAGCGGGGAAATTCTTCTCGGCt                                                              <  1:8854304/101‑1 (MQ=37)

                                    ggggggggggCTGCGATTTTAAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                             <  1:2176855/97‑1 (MQ=255)

                                    cGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                             >  1:291863/1‑101 (MQ=255)

                                     ggAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGa                                                            >  1:267770/1‑101 (MQ=255)

                                     ggAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGa                                                            >  1:7703319/1‑101 (MQ=255)

                                      gAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                           >  1:6969845/1‑101 (MQ=255)

                                      gAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAc                                                           >  1:9011306/1‑101 (MQ=255)

                                       aGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt                                                          >  1:5742868/1‑101 (MQ=255)

                                        ggggggCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc                                                         >  1:8409879/1‑101 (MQ=255)

                                          ggggCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAg                                                       >  1:10621201/1‑101 (MQ=255)

                                           ggtcTGGGATTTTAAATAAT‑GCGTGATGAAGATAAAACAAACCACAAAATTACTAAAGGAAGGTGAAAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt                                                      <  1:10762603/98‑1 (MQ=18)

                                            gtccgCGATCTTCAACAAT‑ACGTGATGCCGATAACCCAAAACAAAAAATGCCTAAAGGAAGTTGCAAGTAGGCGGGAAAATTCTTCTCGGCTGACTCAGtc                                                     <  1:3595223/97‑1 (MQ=9)

                                             gCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca                                                    >  1:6176992/1‑101 (MQ=255)

                                               tGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                  >  1:5167711/1‑101 (MQ=255)

                                               tGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                  >  1:46148/1‑101 (MQ=255)

                                               ctcgctttaCAATAAT‑CCGTGATGAACAGCAAACAAAACAATAAATGGCTAAAGGAACTTAAAAAGAAGAGGGAAAATTCTACTCGGCTGACTCAGtcatt                                                  <  1:8819998/96‑1 (MQ=9)

                                                  gATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:2452365/1‑101 (MQ=255)

                                                  gATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:1223290/1‑101 (MQ=255)

                                                  gATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:10309658/1‑101 (MQ=255)

                                                  gATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:3753893/1‑101 (MQ=255)

                                                    ttttCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                             >  1:4524996/1‑101 (MQ=255)

                                                     tttCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                            >  1:5184312/1‑101 (MQ=255)

                                                     tttCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                            >  1:5935562/1‑101 (MQ=255)

                                                      ttCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                           >  1:7619085/1‑101 (MQ=255)

                                                       taaataat‑GCGTAATGGAGATCACACAAAACAAAAAATTACGTAAAGAAGGTAAAAATAAAAGGGGAAATTCAAATCGGCTGACTCAGTCATTTCATttct                                          <  1:6743226/99‑1 (MQ=12)

                                                        cAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt                                         <  1:5610521/101‑1 (MQ=255)

                                                          ataat‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCa                                       >  1:4035420/1‑101 (MQ=255)

                                                           taat‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                      >  1:1858430/1‑101 (MQ=255)

                                                           taat‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                      >  1:7840389/1‑101 (MQ=255)

                                                           taat‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                      >  1:1040565/1‑101 (MQ=255)

                                                            aat‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATg                                     >  1:1304355/1‑101 (MQ=255)

                                                             at‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:309700/1‑101 (MQ=255)

                                                                 cGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                 >  1:11610511/1‑101 (MQ=255)

                                                                  gTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa                                >  1:8351339/1‑101 (MQ=255)

                                                                   tGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                               >  1:8739111/1‑101 (MQ=255)

                                                                     aTGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                             >  1:4221286/1‑101 (MQ=255)

                                                                      tGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                            <  1:2640447/101‑1 (MQ=255)

                                                                      tGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                            >  1:5714138/1‑101 (MQ=255)

                                                                        cAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                          >  1:10127982/1‑101 (MQ=255)

                                                                         aGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtt                         <  1:3057137/101‑1 (MQ=255)

                                                                         aGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtt                         >  1:9273606/1‑101 (MQ=255)

                                                                              acacaAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                    >  1:3886792/1‑101 (MQ=255)

                                                                                acaAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc                  >  1:1379393/1‑101 (MQ=255)

                                                                                  aaaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                >  1:11701312/1‑101 (MQ=255)

                                                                                   aaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg               >  1:1516937/1‑101 (MQ=255)

                                                                                   aaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg               >  1:361075/1‑101 (MQ=255)

                                                                                   aaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg               >  1:5141010/1‑101 (MQ=255)

                                                                                    aaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt              >  1:4335133/1‑101 (MQ=255)

                                                                                      cacTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa            >  1:9177896/1‑101 (MQ=40)

                                                                                       acTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa           >  1:976418/1‑101 (MQ=40)

                                                                                        cTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAAt          >  1:2632907/1‑101 (MQ=39)

                                                                                          cAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc        >  1:9703500/1‑101 (MQ=37)

                                                                                           aaTTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc       >  1:8601365/1‑101 (MQ=35)

                                                                                            aTTACTTAAGGAAGGTGCGAATAAGCGAGGAAATTCTTCTCGGCTGACTCAGCCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt      >  1:1557226/1‑101 (MQ=19)

                                                                                                cTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa  >  1:250925/1‑101 (MQ=11)

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAAT‑GCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.