BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	2411458 =	NA (NA)	5 (0.020)	5/180	NT	1.7%	intergenic (‑147/+15)	lrhA/insB	DNA‑binding transcriptional repressor/IS1 element protein
*	?	NC_007779	= 2941499	283 (1.180)	5 (0.020)	5/180	NT	1.7%	intergenic (‑276/+75)	gcvA/ygdI	DNA‑binding transcriptional dual regulator/hypothetical protein

Only 100 of 327 total aligned reads displayed.

GAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTT  >  NC_007779/2941399‑2941599

   cTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTa                                                                                                   >  1:5285517/1‑101 (MQ=255)

     tttGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTAcc                                                                                                 >  1:1130655/1‑101 (MQ=255)

         gCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCctgt                                                                                             <  1:6930980/101‑1 (MQ=255)

          cTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCctgtc                                                                                            >  1:364244/1‑101 (MQ=255)

           ttACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCctgtct                                                                                           <  1:5156317/101‑1 (MQ=255)

            tACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCctgtctg                                                                                          <  1:4309269/101‑1 (MQ=255)

             aCGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCctgtctgt                                                                                         <  1:8601719/101‑1 (MQ=255)

              cGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCtgtctgtc                                                                                        >  1:11452646/1‑101 (MQ=255)

               ggTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTcc                                                                                       <  1:9475370/101‑1 (MQ=255)

                  tgtgATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATa                                                                                    <  1:8700509/101‑1 (MQ=255)

                    tgATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGt                                                                                  >  1:10285762/1‑101 (MQ=255)

                     gATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTg                                                                                 >  1:3010994/1‑101 (MQ=255)

                     gATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTg                                                                                 <  1:5499665/101‑1 (MQ=255)

                      agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCTGTACATTTACCCTGTCTGTCCATAGTGa                                                                                >  1:10727182‑M2/71‑101 (MQ=255)

                      aTGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGa                                                                                <  1:9700123/101‑1 (MQ=255)

                       tgttgtgttgttgtgtTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGAt                                                                               >  1:6636710/1‑101 (MQ=255)

                        gttgtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGAtt                                                                              <  1:11932229/101‑1 (MQ=255)

                         ttgtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTa                                                                             >  1:3373660/1‑101 (MQ=255)

                         ttgtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTa                                                                             <  1:3467351/101‑1 (MQ=255)

                           gtgttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAAt                                                                           <  1:2427709/101‑1 (MQ=255)

                             gttgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGt                                                                         >  1:6043627/1‑101 (MQ=255)

                               tgttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAg                                                                       <  1:8871435/101‑1 (MQ=255)

                                gttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGc                                                                      <  1:10542429/101‑1 (MQ=255)

                                 ttgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCa                                                                     <  1:9185235/101‑1 (MQ=255)

                                  tgtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCAc                                                                    >  1:2640427/1‑101 (MQ=255)

                                   gtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCAcc                                                                   >  1:3264576/1‑101 (MQ=255)

                                   gtgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCAcc                                                                   <  1:9229295/101‑1 (MQ=255)

                                    tgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCCCTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTTGCACCg                                                                  <  1:7871851/101‑1 (MQ=255)

                                    tgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCg                                                                  >  1:1763696/1‑101 (MQ=255)

                                    tgttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCg                                                                  >  1:7555515/1‑101 (MQ=255)

                                     gttTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGc                                                                 >  1:7294352/1‑101 (MQ=255)

                                     gttTGCAATTGGTCTGCGATTCAGACCATGGAAGCAAAGCTACGTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGc                                                                 >  1:4682301/1‑101 (MQ=255)

                                      tttGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGcc                                                                <  1:11262967/101‑1 (MQ=255)

                                       ttGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCt                                                               <  1:5655083/101‑1 (MQ=255)

                                       ttGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCt                                                               >  1:1321197/1‑101 (MQ=255)

                                        tGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTa                                                              >  1:5740598/1‑101 (MQ=255)

                                         gCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTaa                                                             <  1:4004319/101‑1 (MQ=255)

                                             ttGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGc                                                         <  1:1467931/101‑1 (MQ=255)

                                             ttGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGc                                                         <  1:4405990/101‑1 (MQ=255)

                                              tGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCg                                                        >  1:9404287/1‑101 (MQ=255)

                                              tGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCg                                                        >  1:4939769/1‑101 (MQ=255)

                                              tGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCg                                                        <  1:2041086/101‑1 (MQ=255)

                                              tGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCg                                                        >  1:1624251/1‑101 (MQ=255)

                                               ggTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCgg                                                       >  1:3929706/1‑101 (MQ=255)

                                                gTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGt                                                      >  1:10201215/1‑101 (MQ=255)

                                                    gCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtt                                                  <  1:7501355/101‑1 (MQ=255)

                                                     cGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTACCACCGCCTAATTGCGGTGCttt                                                 <  1:11023661/101‑1 (MQ=255)

                                                      gATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttt                                                <  1:10474695/101‑1 (MQ=255)

                                                        ttCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttttt                                              <  1:7383930/101‑1 (MQ=255)

                                                        ttCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttttt                                              <  1:11174180/101‑1 (MQ=255)

                                                        ttCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttttt                                              >  1:10102936/1‑101 (MQ=255)

                                                         tCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCttttttt                                             <  1:10932114/101‑1 (MQ=255)

                                                          cAGAACATGGTAGAAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCtttttttt                                            >  1:4877415/1‑101 (MQ=255)

                                                           aGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTa                                           >  1:8277549/1‑101 (MQ=255)

                                                           aGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTa                                           >  1:11831584/1‑101 (MQ=255)

                                                           aGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTa                                           <  1:9870738/101‑1 (MQ=255)

                                                            gACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTAc                                          <  1:2498320/101‑1 (MQ=255)

                                                            gACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTAc                                          >  1:11618030/1‑101 (MQ=255)

                                                             aCCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTAcc                                         >  1:8972289/1‑101 (MQ=255)

                                                              acactaaatcagtaagttggcagcatcaccCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCt                                        <  1:7654121‑M2/71‑1 (MQ=255)

                                                               caaggTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCtt                                       >  1:7197529/4‑101 (MQ=255)

                                                               cATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCtt                                       <  1:8097390/101‑1 (MQ=255)

                                                               cATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCtt                                       <  1:4616272/101‑1 (MQ=255)

                                                                aTGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTg                                      <  1:5396619/101‑1 (MQ=255)

                                                                aTGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTg                                      <  1:451121/101‑1 (MQ=255)

                                                                aTGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTg                                      >  1:2963918/1‑101 (MQ=255)

                                                                 tGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGc                                     <  1:11713528/101‑1 (MQ=255)

                                                                     aGCAAAGCTACCTTTTTTCACTTCCTGTACATggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                 >  1:7091787‑M2/1‑32 (MQ=255)

                                                                     aGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATc                                 >  1:6262158/1‑101 (MQ=255)

                                                                      gCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATcg                                >  1:12027405/1‑101 (MQ=255)

                                                                       cAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATtgc                               >  1:586721/1‑101 (MQ=255)

                                                                       cAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATcgc                               <  1:5973885/101‑1 (MQ=255)

                                                                       cAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATcgc                               >  1:4215963/1‑101 (MQ=255)

                                                                          aGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGaa                            <  1:9572391/101‑1 (MQ=255)

                                                                           gCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAAt                           <  1:9631608/101‑1 (MQ=255)

                                                                           gCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAAt                           >  1:2777435/1‑101 (MQ=255)

                                                                            cTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAAtt                          >  1:1931184/1‑101 (MQ=255)

                                                                             tACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTa                         <  1:8046940/101‑1 (MQ=255)

                                                                             tACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTa                         >  1:213275/1‑101 (MQ=255)

                                                                             tACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTa                         >  1:1031703/1‑101 (MQ=255)

                                                                              aCCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTAc                        >  1:9052883/1‑101 (MQ=255)

                                                                                cTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTg                      >  1:3779279/1‑101 (MQ=255)

                                                                                cTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTg                      >  1:418292/1‑101 (MQ=255)

                                                                                 ttttttCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGa                     >  1:3678857/1‑101 (MQ=255)

                                                                                     ttCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCa                 >  1:9770695/1‑101 (MQ=255)

                                                                                      tCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAg                >  1:10831444/1‑101 (MQ=255)

                                                                                       cACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGt               >  1:11962685/1‑101 (MQ=255)

                                                                                         cTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTc             >  1:10003805/1‑101 (MQ=255)

                                                                                           tCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGa           >  1:847896/1‑101 (MQ=255)

                                                                                            ccTGTACATTTACCCTGTCTGTCCCTAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGAc          >  1:6721750/1‑101 (MQ=255)

                                                                                            ccTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGAc          >  1:7974688/1‑101 (MQ=255)

                                                                                             cTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGAcc         >  1:12185310/1‑101 (MQ=255)

                                                                                                tACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCAtc      >  1:5773921/1‑101 (MQ=255)

                                                                                                 aCATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCAtct     <  1:1097871/101‑1 (MQ=255)

                                                                                                 aCATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCAtct     <  1:7769659/101‑1 (MQ=255)

                                                                                                  cATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCAtctc    >  1:6201467/1‑101 (MQ=255)

                                                                                                   aTTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACTATctct   <  1:879503/101‑1 (MQ=255)

                                                                                                   aTTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATctct   >  1:1148652/1‑101 (MQ=255)

                                                                                                    tggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt  >  1:8520241‑M2/1‑1 (MQ=255)

                                                                                                    tggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt  >  1:646506‑M2/1‑1 (MQ=255)

GAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTT  >  NC_007779/2941399‑2941599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.