| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,827,675 | T→G | 1.7% | intergenic (+39/‑28) | gutM → / → srlR | DNA‑binding transcriptional activator/DNA‑binding transcriptional repressor |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 2,827,675 | 0 | T→G | 1.7% | 6.7 ‑0.4 ‑0.1 | 300 | intergenic (+39/‑28) | gutM/srlR | DNA‑binding transcriptional activator/DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): new base (2/3): ref base (160/135): total (162/138) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.64e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.42e-01 | ||||||||||
Only 100 of 315 total aligned reads displayed.
CCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAAT > NC_007779/2827577‑2827775 | ccccATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTg > 1:1001427/1‑101 (MQ=255) cccATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGa < 1:4787703/101‑1 (MQ=255) cccATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGa < 1:3205177/101‑1 (MQ=255) cATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGaaa > 1:4556010/1‑101 (MQ=255) cATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGaaa > 1:3861200/1‑101 (MQ=255) cATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGaaa < 1:2794404/101‑1 (MQ=255) aTGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAAc > 1:8894106/1‑101 (MQ=255) aTGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACATGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAAc > 1:11516457/1‑101 (MQ=255) gATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCt > 1:10516145/1‑101 (MQ=255) ccACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTaaa > 1:4341117/1‑101 (MQ=255) cACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAAt > 1:2973896/1‑101 (MQ=255) aCTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATc < 1:5696310/101‑1 (MQ=255) aCTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATc > 1:5252094/1‑101 (MQ=255) cTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCa < 1:412556/101‑1 (MQ=255) tATCACAGAATGCTCTATCATTGGTGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAg > 1:4924801/1‑101 (MQ=255) tATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAg < 1:10895760/101‑1 (MQ=255) tATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAg < 1:7706244/101‑1 (MQ=255) tCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGt < 1:3804062/101‑1 (MQ=255) tCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGt > 1:10759660/1‑101 (MQ=255) caGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAAt < 1:10271484/101‑1 (MQ=255) gAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTGTGAAACCTAAATCAGGTAATCa < 1:8507559/101‑1 (MQ=255) aaTGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCAc < 1:6353820/101‑1 (MQ=255) gCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGcc < 1:4019987/101‑1 (MQ=255) ctctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGccc > 1:3657315/1‑101 (MQ=255) tctATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCa > 1:3560125/1‑101 (MQ=255) tATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATg > 1:475130/1‑101 (MQ=255) aTCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGa < 1:2537210/101‑1 (MQ=255) aTCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGa < 1:10547365/101‑1 (MQ=255) tCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGaa > 1:2461397/1‑101 (MQ=255) cATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGaaa > 1:2037754/1‑101 (MQ=255) cATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGaaa > 1:8709950/1‑101 (MQ=255) tGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCt < 1:12099144/101‑1 (MQ=255) ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTc < 1:11848459/101‑1 (MQ=255) ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTc > 1:2102029/1‑101 (MQ=255) ggCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTc > 1:728551/1‑101 (MQ=255) cgcTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgt < 1:8209464/101‑1 (MQ=255) gcTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtc > 1:6712420/1‑101 (MQ=255) cTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtca < 1:4208136/101‑1 (MQ=255) ttAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcag > 1:3238028/1‑101 (MQ=255) tAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGGGAAGTTATCATTTTGAAACCTAAATAAGGAAATCACGCCAATAAAACCTcgtcagc > 1:747258/1‑101 (MQ=255) aaaCTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcg > 1:8743727/1‑101 (MQ=255) aaaCTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGAGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcg < 1:7893988/101‑1 (MQ=255) aaCTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgt > 1:5030380/1‑101 (MQ=255) aaCTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgt > 1:1848159/1‑101 (MQ=255) aCTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgtc < 1:12164281/101‑1 (MQ=255) cTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgtca < 1:1460715/101‑1 (MQ=255) cTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgtca < 1:8630946/101‑1 (MQ=255) tggaaCGTGGATAATTTCGTTGTGAATGTTACTTTCTTTCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgtcag < 1:550472/98‑1 (MQ=255) tGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTcgtcagcgtcag > 1:11196006/1‑101 (MQ=255) gAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAgg > 1:8068230/1‑101 (MQ=255) aaaCGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGgc > 1:8940909/1‑101 (MQ=255) aCGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGgccg > 1:6196466/1‑101 (MQ=255) gTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGgccgcc < 1:6536903/101‑1 (MQ=255) gTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGgccgcc < 1:5766705/101‑1 (MQ=255) gTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGgccgcc < 1:9531309/101‑1 (MQ=255) tGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCa > 1:1598341/1‑101 (MQ=255) gATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCAtt > 1:12198637/1‑101 (MQ=255) aTAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGCCCGCCATTc > 1:711995/1‑101 (MQ=255) tAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCt > 1:582888/1‑101 (MQ=255) tAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCt > 1:9855528/1‑101 (MQ=255) aaTTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTAAAACCTAAATCAAGTAACCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTg < 1:11013324/101‑1 (MQ=255) tttCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGa > 1:5174653/1‑101 (MQ=255) cGTTGTGAATGTTACTTGCTTGCGAAGTTATGATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTa > 1:6012715/1‑101 (MQ=255) cGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTa > 1:7509632/1‑101 (MQ=255) cGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTa > 1:10296789/1‑101 (MQ=255) gTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTAt > 1:3507166/1‑101 (MQ=255) gTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTAt > 1:11960189/1‑101 (MQ=255) gTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTAt < 1:4663683/101‑1 (MQ=255) tgtgAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCt < 1:5385393/101‑1 (MQ=255) gtgAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTg < 1:11930800/101‑1 (MQ=255) tgAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGc > 1:6157925/1‑101 (MQ=255) tGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAATCCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaaaa < 1:3058294/101‑1 (MQ=255) tGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaaaa > 1:1283496/1‑101 (MQ=255) tGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaaaa < 1:1985762/101‑1 (MQ=255) tGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCaaaa > 1:6499722/1‑101 (MQ=255) aCTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAg < 1:10113208/101‑1 (MQ=255) cttgcttgCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAgg < 1:3301003/101‑1 (MQ=255) tgcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt > 1:6891344/1‑101 (MQ=255) tgcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt > 1:8876152/1‑101 (MQ=255) tgcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGt < 1:7976992/101‑1 (MQ=255) gcttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTa > 1:2321732/1‑101 (MQ=255) cttgcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTaa > 1:7785224/1‑101 (MQ=255) gcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATg < 1:2911109/101‑1 (MQ=255) gcGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATg > 1:6090932/1‑101 (MQ=255) cGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGTGTATCTGCAAAAGCAGGGTAAATGc < 1:11914451/101‑1 (MQ=255) cGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGc > 1:368265/1‑101 (MQ=255) gAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCt > 1:8326979/1‑101 (MQ=255) aaGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTc < 1:9601594/101‑1 (MQ=255) aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCg < 1:10962488/101‑1 (MQ=255) aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCg < 1:11655551/101‑1 (MQ=255) aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCg < 1:9119124/101‑1 (MQ=255) aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCg < 1:9293451/101‑1 (MQ=255) aGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCg > 1:4859645/1‑101 (MQ=255) tATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATTATCgggt > 1:6452306/1‑99 (MQ=255) tATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGtt > 1:7054017/1‑101 (MQ=255) tATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGtt < 1:11380751/101‑1 (MQ=255) cATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTgaa < 1:4603978/101‑1 (MQ=255) ttttGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTgaaga > 1:1180482/1‑101 (MQ=255) ttttGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTgaaga > 1:9718027/1‑101 (MQ=255) ttGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAAt > 1:11060588/1‑101 (MQ=255) | CCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAATTTCGTTGTGAATGTTACTTGCTTGCGAAGTTATCATTTTGAAACCTAAATCAGGTAATCACGCCCATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAAT > NC_007779/2827577‑2827775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |