| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_007779 | 57,026 | Δ21 bp | 24.3% | coding (64‑84/2355 nt) | imp ← | exported protein required for envelope biosynthesis and integrity |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 57025 | 191 (0.680) | 63 (0.220) | 51/180 | NT | 24.3% | coding (85/2355 nt) | imp | exported protein required for envelope biosynthesis and integrity |
| ? | NC_007779 | 57047 = | 201 (0.710) | coding (63/2355 nt) | imp | exported protein required for envelope biosynthesis and integrity | |||||
CCCCTTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/56926‑57025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTGCG > NC_007779/57047‑57146 CCCCTTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGAC > 1:13697786/1‑101CCCCTTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGAC < 1:2440609/101‑1CCCCTTGCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGAC > 1:12060454/1‑101 CCTATCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTG > 1:13952873/1‑101 CTTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGT > 1:9111356/1‑101 TTTCGCGTGGTCAGCCTTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTT < 1:10624188/101‑1 TTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTT > 1:3320130/1‑101 TTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATCCACTGTGACTGTT > 1:11805891/1‑101 CGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTA > 1:14198720/1‑101 CGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTA > 1:4823926/1‑101 GTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACTGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTAT < 1:6405506/101‑1 GTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTAT < 1:2178746/101‑1 GTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTAT > 1:10062988/1‑101 TGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATA < 1:12759948/101‑1 GGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAA > 1:10892401/1‑101 TCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAG > 1:302472/1‑101 CAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGG > 1:5954227/1‑101 CAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGG > 1:12970681/1‑101 CAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGG < 1:131729/101‑1 CAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGG < 1:10244084/101‑1 TGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTG < 1:11553301/101‑1 ATAGTCACGGGTAAGTAATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGGGACTGTTGACTATAAAGGGCGGTGGC > 1:9495269/1‑101 CACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCA < 1:8930929/101‑1 GGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGG > 1:5457683/1‑101 GTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTG < 1:4936804/101‑1 TAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGG < 1:7586420/101‑1 GTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCA < 1:7461196/101‑1 TCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAG < 1:4595498/101‑1 ATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGA > 1:11521117/1‑101 TGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGA < 1:1460395/101‑1 TGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGA < 1:1344697/101‑1 GGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAG < 1:3329238/101‑1 TATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTG < 1:13336385/101‑1 CGCCCTGTACCAGAGGACGGTGATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGG < 1:12354800/101‑1 CCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGGGGCAATCATGTTGGCCAGGCGAGTGGGGATA > 1:3754297/1‑101 CTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATAC < 1:10899143/101‑1 CTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATAC > 1:3345984/1‑101 TGTACCCAAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACG < 1:2723807/101‑1 TACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTT > 1:13499355/1‑101 CAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTT > 1:6563795/1‑101 AGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTT < 1:5185446/101‑1 AGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTT > 1:5153903/1‑101 GAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTC < 1:9192923/101‑1 ACGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATAC < 1:3149252/101‑1 CGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACG < 1:1521933/101‑1 CGGTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACG < 1:7847291/101‑1 GTCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTT < 1:5907421/101‑1 TCATAGCTTGGCATGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTG < 1:11833106/101‑1 TCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTG > 1:3469989/1‑101 TCATAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTG > 1:4196955/1‑101 TAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATT > 1:11590417/1‑101 TAGCTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATT < 1:4013604/101‑1 CTTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTA < 1:13341207/101‑1 TTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTAT > 1:971876/1‑101 TTGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTAT > 1:6234965/1‑101 TGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATT > 1:10933533/1‑101 TGGCACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATT < 1:6169540/101‑1 ACGNCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTC > 1:11374172/1‑101 ACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTC < 1:5244013/101‑1 ACGCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTC < 1:3780823/101‑1 GCCCAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCA < 1:235896/101‑1 CAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGCTTTTATTGTTCCATCA < 1:9473216/101‑1 CAACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCA < 1:1451202/101‑1 ACATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATC < 1:3809100/101‑1 ATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGG < 1:3622920/101‑1 ATGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGG > 1:2502650/1‑101 TGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGT < 1:1691278/101‑1 TGCACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGT < 1:2073057/101‑1 ACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAAC < 1:340758/101‑1 ACTGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAAC < 1:5090484/101‑1 ACTGGGACTGTTGACTATAAAGGGCGGCGGCAATCATGGTGGCCAGGAGAGCGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAAC > 1:3937785/1‑101 TGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGT > 1:1603275/1‑101 TGTGACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGT < 1:9419161/101‑1 TGATTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTG > 1:2229551/1‑101 GACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTGC > 1:13282745/1‑101 ACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTGCG < 1:8003538/101‑1 ACTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTGCG < 1:3135156/101‑1 CCCCTTTCGCGTGGTCAGCATTGATAGTCACGGGTAAGTCATTGGTATCGCCCTGTACCAGAGGACGGTCATAGCTTGGCACGCCCAACATGCACTGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/56926‑57025‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTTGACTATAAAGGGCGGTGGCAATCATGGTGGCCAGGAGAGTGGGGATACGTTTTTTCATACGTTGATTTTATTGTTCCATCATCGGTAACGTTGCG > NC_007779/57047‑57146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |