New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 1221489 =8 (0.030)274 (0.990) 135/176 NT 97.2% intergenic (+711/+2393) ymgF/ymgD hypothetical protein/hypothetical protein
?NC_007779 1301041 = NA (NA)intergenic (+219/‑89) ychE/insC inner membrane protein/IS2 element protein

Only 100 of 710 total aligned reads displayed.

GTGTAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATG  >  NC_007779/1221389‑1221589
                                                                                                    |                                                                                                    
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      >  1:6975671‑M1/101‑101 (MQ=255)
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      >  1:2531614‑M1/101‑101 (MQ=255)
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      <  1:10999555‑M1/1‑1 (MQ=255)
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      >  1:13888657‑M1/101‑101 (MQ=255)
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      >  1:12608346‑M1/101‑101 (MQ=255)
acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtct                                                                                                      <  1:11400820‑M1/1‑1 (MQ=255)
 tgtAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAAAAAAGTATTATATATAagcgata                                                                                                     >  1:1000136/1‑101 (MQ=255)
 catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTa                                                                                                     <  1:908690‑M1/2‑1 (MQ=255)
 catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTa                                                                                                     <  1:6863010‑M1/2‑1 (MQ=255)
 catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTa                                                                                                     >  1:5548877‑M1/100‑101 (MQ=255)
 catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTa                                                                                                     >  1:4115580‑M1/100‑101 (MQ=255)
 catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTa                                                                                                     >  1:3342947‑M1/100‑101 (MQ=255)
  gtAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAagcgatag                                                                                                    <  1:3163367/101‑1 (MQ=255)
  atcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctat                                                                                                    <  1:11916185‑M1/3‑2 (MQ=255)
   tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctatt                                                                                                   >  1:2076471‑M1/98‑99 (MQ=255)
   tAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAagcgatagc                                                                                                   >  1:4714119/1‑101 (MQ=255)
    aaCTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAagcgatagcg                                                                                                  >  1:13054874/1‑101 (MQ=255)
       tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctattcact                                                                                               <  1:8523481‑M1/8‑7 (MQ=255)
        catctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggggattcagggggccagtctattcactg                                                                                              <  1:672947‑M1/9‑8 (MQ=255)
         atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctattcactgt                                                                                             >  1:5156997‑M1/92‑93 (MQ=255)
          atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgggatttcgggggccagtcTAGCGATATTa                                                                                            <  1:4943300‑M1/11‑1 (MQ=255)
          atatatAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtgga                                                                                            >  1:5350456‑M1/1‑97 (MQ=255)
           tatataAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggat                                                                                           >  1:6450113‑M1/1‑96 (MQ=255)
                 tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACctc                                                                                     >  1:5029155‑M1/84‑101 (MQ=255)
                 aataatGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgccc                                                                                     >  1:7810045‑M1/1‑90 (MQ=255)
                   taatGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccct                                                                                   <  1:13636133‑M1/101‑14 (MQ=255)
                     atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGa                                                                                 <  1:11314169‑M1/22‑1 (MQ=255)
                     atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGa                                                                                 >  1:7656948‑M1/80‑101 (MQ=255)
                      tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGaa                                                                                >  1:13403994‑M1/79‑101 (MQ=255)
                      tGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctata                                                                                >  1:8114505‑M1/1‑85 (MQ=255)
                          tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGt                                                                            >  1:10142202‑M1/75‑101 (MQ=255)
                          aGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggattggcccctatatttc                                                                            >  1:1214715‑M1/1‑81 (MQ=255)
                           gtgtGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttcc                                                                           <  1:14001901‑M1/101‑22 (MQ=255)
                           agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTa                                                                           <  1:5437640‑M1/28‑1 (MQ=255)
                           agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTa                                                                           >  1:8299838‑M1/74‑101 (MQ=255)
                            tgtgATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttcca                                                                          <  1:11609287‑M1/101‑23 (MQ=255)
                             tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATc                                                                         >  1:12104426‑M1/72‑101 (MQ=255)
                              ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCt                                                                        >  1:6150133‑M1/71‑101 (MQ=255)
                               gatgaCTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagac                                                                       >  1:4044201‑M1/1‑76 (MQ=255)
                                     tAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATCATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgt                                                                 >  1:12759523‑M1/1‑70 (MQ=255)
                                     ctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAg                                                                 <  1:11696696‑M1/38‑1 (MQ=255)
                                      tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGa                                                                <  1:2211094‑M1/39‑1 (MQ=255)
                                      tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGa                                                                <  1:1997568‑M1/39‑1 (MQ=255)
                                       gtggtgATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgtta                                                               <  1:7339480‑M1/101‑34 (MQ=255)
                                          attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAAt                                                            >  1:5701212‑M1/59‑101 (MQ=255)
                                           ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATg                                                           <  1:273379‑M1/44‑1 (MQ=255)
                                           ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATg                                                           <  1:7921163‑M1/44‑1 (MQ=255)
                                            taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATgg                                                          >  1:7440263‑M1/57‑101 (MQ=255)
                                            taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATgg                                                          <  1:12452505‑M1/45‑1 (MQ=255)
                                            taagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATgg                                                          <  1:4232942‑M1/45‑1 (MQ=255)
                                            gATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcact                                                          >  1:9682891‑M1/1‑63 (MQ=255)
                                            gATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcact                                                          >  1:1630969‑M1/1‑63 (MQ=255)
                                             aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGa                                                         >  1:1496511‑M1/56‑101 (MQ=255)
                                              tGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagagatctgctatcactta                                                        >  1:10620803‑M1/1‑61 (MQ=255)
                                                actatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAggg                                                      <  1:9420793‑M1/49‑1 (MQ=255)
                                                  tatcacttatttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGAt                                                    <  1:1749183‑M1/51‑1 (MQ=255)
                                                       tGGTATTTCTGTTGATAGTCAAAGCAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattac                                               <  1:444095‑M1/101‑50 (MQ=255)
                                                       cttatttaagtgacattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAAcag                                               >  1:11812518‑M1/46‑101 (MQ=255)
                                                         gTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                             >  1:2849195‑M1/1‑50 (MQ=255)
                                                          tATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatgacttaacccattacaag                                            >  1:12331439‑M1/1‑49 (MQ=255)
                                                            ttaagtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAAcagccagc                                          >  1:8855423‑M1/41‑101 (MQ=255)
                                                               agtgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCa                                       >  1:12836931‑M1/38‑101 (MQ=255)
                                                                tGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                      <  1:11124857‑M1/101‑59 (MQ=255)
                                                                tGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                      >  1:14166533‑M1/1‑43 (MQ=255)
                                                                tGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                      >  1:4872404‑M1/1‑43 (MQ=255)
                                                                 tgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagt                                     <  1:2428121‑M1/66‑1 (MQ=255)
                                                                 tgatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagt                                     >  1:2145725‑M1/36‑101 (MQ=255)
                                                                  ttGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc                                    <  1:13748683‑M1/101‑61 (MQ=255)
                                                                  gatattggttgtctggagattcagggggccggtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagta                                    <  1:13824525‑M1/67‑1 (MQ=255)
                                                                  gatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagta                                    <  1:10707821‑M1/67‑1 (MQ=255)
                                                                  gatattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagta                                    <  1:12239726‑M1/67‑1 (MQ=255)
                                                                   tGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc                                   >  1:9912482‑M1/1‑40 (MQ=255)
                                                                   atattggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCagtag                                   >  1:10270018‑M1/34‑101 (MQ=255)
                                                                      tAGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatacttccagacatctgttatcacttaacccattacaagcccgctgccgca                                >  1:9832895‑M1/1‑37 (MQ=255)
                                                                       aGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcag                               <  1:4613797‑M1/101‑66 (MQ=255)
                                                                       aGTCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcag                               >  1:3715020‑M1/1‑36 (MQ=255)
                                                                        ggttgtctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGt                              <  1:5271754‑M1/73‑1 (MQ=255)
                                                                         tCAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat                             <  1:10863907‑M1/101‑68 (MQ=255)
                                                                          cAAAACAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata                            >  1:6268054‑M1/1‑33 (MQ=255)
                                                                           aaaaCAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat                           >  1:11486227‑M1/1‑32 (MQ=255)
                                                                           aaaaCAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat                           <  1:9370418‑M1/101‑70 (MQ=255)
                                                                            aaaCAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt                          >  1:86972‑M1/1‑31 (MQ=255)
                                                                             tctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAAtt                         <  1:2331587‑M1/78‑1 (MQ=255)
                                                                              ctggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAAttt                        <  1:1851246‑M1/79‑1 (MQ=255)
                                                                              aCAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc                        <  1:1251769‑M1/101‑73 (MQ=255)
                                                                               tggagattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTtg                       <  1:10394709‑M1/80‑1 (MQ=255)
                                                                               cAAAGTATTATATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccc                       >  1:7084150‑M1/1‑28 (MQ=255)
                                                                                  agattcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTtggtg                    >  1:10528786‑M1/19‑101 (MQ=255)
                                                                                     ttcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCa                 <  1:4517426‑M1/86‑1 (MQ=255)
                                                                                     attatATATAAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                 <  1:13305628‑M1/101‑80 (MQ=255)
                                                                                      tcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCAc                <  1:8949994‑M1/87‑1 (MQ=255)
                                                                                      tcagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCAc                <  1:6591492‑M1/87‑1 (MQ=255)
                                                                                       tatatataAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag               >  1:7519937‑M1/1‑20 (MQ=255)
                                                                                       cagggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCAcc               <  1:3854030‑M1/88‑1 (MQ=255)
                                                                                        atatataAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc              >  1:3568913‑M1/1‑19 (MQ=255)
                                                                                        agggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCa              <  1:9198784‑M1/89‑1 (MQ=255)
                                                                                        agggggccagtcTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCa              <  1:6000447‑M1/89‑1 (MQ=255)
                                                                                            ataAGCGATAGCGATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata          >  1:2614830‑M1/1‑15 (MQ=255)
                                                                                                 gtcTAGCGATATTAAGACCTCTGGAAGCCTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGa     >  1:5813440‑M1/4‑101 (MQ=255)
                                                                                                   cTAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAAt   <  1:8419195‑M1/100‑1 (MQ=255)
                                                                                                    |                                                                                                    
GTGTAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATG  >  NC_007779/1221389‑1221589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.