| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 693388 | 269 (0.960) | 26 (0.090) | 24/180 | NT | 8.8% | coding (452/1080 nt) | ybeZ | hypothetical protein |
| ? | NC_007779 | = 1050967 | NA (NA) | intergenic (+15/+418) | insB/cspH | IS1 transposase InsAB'/stress protein, member of the CspA‑family | |||||
GTCAGCAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/693289‑693388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC < NC_007779/1050967‑1050880 GTCAGCAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACCGCCGCAGCCACTGCCAGGTAGGATTTACCCGTACCCGCCGGGCCAACGCCGAAGGG > 1:5800342/1‑101 TCAGCAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGG > 1:1989456/1‑101 AGCAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTA < 1:13014953/101‑1 CAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAAT > 1:11475711/1‑101 CAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAAT > 1:1757343/1‑101 GAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGA < 1:5703761/101‑1 TACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACag > 1:9361492/1‑99 ACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGGAATGACTCC > 1:11283624/1‑101 CGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGT < 1:10619734/101‑1 CTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTT > 1:10928078/1‑101 CTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTT > 1:4522432/1‑101 TCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTT > 1:8219312/1‑101 TCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTT < 1:3097422/101‑1 CCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTA < 1:8329845/101‑1 AGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATG > 1:8906067/1‑101 TGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATG < 1:9501089/101‑1 CCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCC > 1:4801831/1‑101 CGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCC > 1:6608739/1‑101 CAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGA > 1:5703928/1‑101 AGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAT < 1:11115981/101‑1 TGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTT < 1:10062678/101‑1 CAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC > 1:1853549/1‑101 AGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCA < 1:10000151/101‑1 ACCCGTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAC > 1:11289879/1‑101 GTACCCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAT > 1:5295237/1‑101 CCGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTG > 1:13186974/1‑101 CGCCGGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGA > 1:5222856/1‑101 GGGCCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAC > 1:6262591/1‑101 CCAACGCCGAAGGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC < 1:2348666/101‑1 GTCAGCAGAATACGGCGAATTTCCTGACGCTCCAGGGCATCAACTGCCGCAGCCACTGCCAGGTAGGTTTTACCCGTACCCGCCGGGCCAACGCCGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/693289‑693388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAC < NC_007779/1050967‑1050880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |