BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	19796 =	NA (NA)	6 (0.020)	6/180	NT	2.0%	intergenic (+176/+15)	nhaR/insB	DNA‑binding transcriptional activator/IS1 transposase InsAB'
*	?	NC_007779	= 2941492	290 (1.040)	6 (0.020)	6/180	NT	2.0%	intergenic (‑269/+82)	gcvA/ygdI	DNA‑binding transcriptional dual regulator/hypothetical protein

Only 100 of 333 total aligned reads displayed.

TTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCC  >  NC_007779/19696‑19893

tttGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTg                                                                                                   <  1:1290881/101‑1 (MQ=255)

 ttGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTgg                                                                                                  >  1:4885977/1‑101 (MQ=255)

  tGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGt                                                                                                 >  1:10832081/1‑101 (MQ=255)

  tGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGt                                                                                                 <  1:6780905/101‑1 (MQ=255)

    cccGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTaa                                                                                               <  1:10314105/101‑1 (MQ=255)

      cGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATg                                                                                             <  1:10209192/101‑1 (MQ=255)

       gCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGa                                                                                            <  1:7958330/101‑1 (MQ=255)

        cTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGCAAAGAGTAGTAATTGCTGGTAATGAc                                                                                           >  1:4983224/1‑101 (MQ=255)

         ttGAGACATTGTTTCCATATGGACGCGGGCGAATAAATAGAGGAATCTGCTTACTTCCTTCGTGGGGATGCTGAAAAGAGGAGTAATTGCTGGTAATGACt                                                                                          >  1:11271004/1‑101 (MQ=255)

            agaCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCa                                                                                       >  1:1716076/1‑101 (MQ=255)

            agaCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCa                                                                                       <  1:363247/101‑1 (MQ=255)

              aCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                     <  1:2809446/101‑1 (MQ=255)

              aCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                     >  1:5219521/1‑101 (MQ=255)

              aCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAAc                                                                                     >  1:8092116/1‑101 (MQ=255)

                 ttGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTa                                                                                  <  1:2945471/101‑1 (MQ=255)

                 ttGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTa                                                                                  >  1:6305954/1‑101 (MQ=255)

                 ttGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTa                                                                                  >  1:6148540/1‑101 (MQ=255)

                  tGTTTCCATATGTACGCGGGCGAATGAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAt                                                                                 >  1:3321740/1‑101 (MQ=255)

                  tGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAt                                                                                 <  1:7290083/101‑1 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               >  1:14086282/1‑101 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               <  1:3835607/101‑1 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               <  1:2028301/101‑1 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               <  1:5088352/101‑1 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               <  1:6222233/101‑1 (MQ=255)

                    tttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTg                                                                               >  1:11874718/1‑101 (MQ=255)

                     ttCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGa                                                                              <  1:1800746/101‑1 (MQ=255)

                      tCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGAt                                                                             >  1:8538605/1‑101 (MQ=255)

                        cATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAg                                                                           <  1:2166484/101‑1 (MQ=255)

                        cATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAg                                                                           <  1:1579990/101‑1 (MQ=255)

                        cATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAg                                                                           >  1:9111702/1‑101 (MQ=255)

                         atatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgt                                                                          <  1:12505617/101‑1 (MQ=255)

                          tatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgtg                                                                         <  1:161947/101‑1 (MQ=255)

                           atGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgtgt                                                                        <  1:7502113/101‑1 (MQ=255)

                            tGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGtt                                                                       >  1:13863822/1‑101 (MQ=255)

                             gTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                      <  1:13850043/101‑1 (MQ=255)

                             gTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                      <  1:8838684/101‑1 (MQ=255)

                             gTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                      <  1:7663025/101‑1 (MQ=255)

                             gTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGttt                                                                      <  1:9759680/101‑1 (MQ=255)

                              tACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGtttt                                                                     <  1:13383242/101‑1 (MQ=255)

                                cgcgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTAt                                                                   >  1:1011822/1‑101 (MQ=255)

                                 gcgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATg                                                                  >  1:4684189/1‑101 (MQ=255)

                                 gcgGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATg                                                                  <  1:2889068/101‑1 (MQ=255)

                                   gggCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt                                                                <  1:6883600/101‑1 (MQ=255)

                                     gCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                              <  1:584448/101‑1 (MQ=255)

                                     gCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCGGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                              <  1:9339758/101‑1 (MQ=255)

                                      cGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAg                                                             >  1:3136851/1‑101 (MQ=255)

                                       gAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTATTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                            <  1:1002912/101‑1 (MQ=255)

                                       gAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                            >  1:8714145/1‑101 (MQ=255)

                                        aataaataGAGGAATCTGATTACTTCCTTCATGGGGATGGTGAAAAGAGGAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGag                                                           >  1:2722137/1‑100 (MQ=255)

                                            aataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg                                                       >  1:5445514/1‑101 (MQ=255)

                                             ataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc                                                      >  1:11363250/1‑101 (MQ=255)

                                               agagGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc                                                    <  1:11747311/101‑1 (MQ=255)

                                                gagGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCg                                                   <  1:345402/101‑1 (MQ=255)

                                                  ggAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGAt                                                 <  1:2711325/101‑1 (MQ=255)

                                                   gAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATg                                                >  1:3051804/1‑101 (MQ=255)

                                                    aaTCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGa                                               <  1:12124312/101‑1 (MQ=255)

                                                     aTCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGCCTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                              <  1:11048758/101‑1 (MQ=255)

                                                     aTCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                              <  1:11158068/101‑1 (MQ=255)

                                                         gATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGTTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTg                                          <  1:12211688/101‑1 (MQ=255)

                                                          aTTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGt                                         >  1:3246913/1‑101 (MQ=255)

                                                           ttACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTc                                        >  1:3887442/1‑101 (MQ=255)

                                                           ttACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTc                                        >  1:13277818/1‑101 (MQ=255)

                                                            tACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCa                                       >  1:12722103/1‑101 (MQ=255)

                                                                tccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                   <  1:8301359/101‑1 (MQ=255)

                                                                 ccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                  >  1:12560775/1‑101 (MQ=255)

                                                                  cttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGc                                 >  1:3761141/1‑101 (MQ=255)

                                                                   ttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCt                                >  1:6521414/1‑101 (MQ=255)

                                                                     cATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTcc                              >  1:431791/1‑101 (MQ=255)

                                                                      aTGGGGATGCTGAAAATAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCa                             <  1:5323288/101‑1 (MQ=255)

                                                                      aTGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCa                             <  1:11460025/101‑1 (MQ=255)

                                                                        ggggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAcc                           <  1:12277696/101‑1 (MQ=255)

                                                                           gATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTTCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAt                        >  1:1478048/1‑101 (MQ=255)

                                                                           gATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAt                        <  1:12812717/101‑1 (MQ=255)

                                                                            aTGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtt                       <  1:3928055/101‑1 (MQ=255)

                                                                             tGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAttt                      >  1:5606041/1‑101 (MQ=255)

                                                                               cTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTg                    >  1:13903707/1‑101 (MQ=255)

                                                                                tGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTga                   >  1:6595498/1‑101 (MQ=255)

                                                                                 gAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgag                  <  1:10728450/101‑1 (MQ=255)

                                                                                 gAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgag                  <  1:4438652/101‑1 (MQ=255)

                                                                                   aaaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGaa                >  1:7230306/1‑101 (MQ=255)

                                                                                    aaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAc               >  1:14032711/1‑101 (MQ=255)

                                                                                     agagTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACg              <  1:7796488/101‑1 (MQ=255)

                                                                                     agagTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACg              <  1:14173486/101‑1 (MQ=255)

                                                                                       agtagtAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGAc            <  1:697741/101‑1 (MQ=255)

                                                                                        gtagtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCTGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACa           <  1:7727731/101‑1 (MQ=255)

                                                                                        gtagtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACa           <  1:10638922/101‑1 (MQ=255)

                                                                                        gtagtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACa           <  1:2503652/101‑1 (MQ=255)

                                                                                          agtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGc         <  1:10578649/101‑1 (MQ=40)

                                                                                          agtaATTGCTGGGAATGACTCCCACTTTTTTATAGGGGTTTTTGTTTTGATAATGCCCGATGACTTTTTTATGCAGCTCCCCCCATTTTTAGAAAGACAgg         >  1:13558093/1‑100 (MQ=9)

                                                                                           gtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg        <  1:5510438/101‑1 (MQ=39)

                                                                                           gtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg        <  1:708753/101‑1 (MQ=39)

                                                                                             aaTTGCTGGTAATGACTCCTACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAc      >  1:9173580/1‑101 (MQ=37)

                                                                                             aaTTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAc      >  1:2235486/1‑101 (MQ=37)

                                                                                              aTTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACt     >  1:11581267/1‑101 (MQ=35)

                                                                                               ttGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACtt    <  1:5746504/101‑1 (MQ=34)

                                                                                                tGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc   >  1:4046292/1‑101 (MQ=33)

                                                                                                tGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc   >  1:4211482/1‑101 (MQ=33)

                                                                                                tGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc   >  1:11650920/1‑101 (MQ=33)

                                                                                                tGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc   <  1:9465477/101‑1 (MQ=33)

                                                                                                 gCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTcc  >  1:9011424/1‑101 (MQ=32)

TTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCC  >  NC_007779/19696‑19893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.