New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 273179 =NA (NA)236 (0.840) 122/180 NT 73.5% coding (1109/1146 nt) ykfC hypothetical protein
?NC_007779 657877 = 85 (0.300)coding (164/210 nt) cspE DNA‑binding transcriptional repressor

Only 100 of 537 total aligned reads displayed.

CCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTGGTCTT  >  NC_007779/657777‑657977
                                                                                                    |                                                                                                    
 cGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACt                                                                                                     >  1:7304978/1‑101 (MQ=255)
 cGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACt                                                                                                     <  1:5243604/101‑1 (MQ=255)
    ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAc                                                                                                  >  1:8949894‑M2/97‑101 (MQ=255)
     tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACg                                                                                                 <  1:11826067‑M2/6‑1 (MQ=255)
     aGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAgg                                                                                                 >  1:7476054‑M2/1‑99 (MQ=255)
      gACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAgga                                                                                                <  1:6765277‑M2/101‑4 (MQ=255)
      caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACgg                                                                                                >  1:5842738‑M2/95‑101 (MQ=255)
       aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGt                                                                                               <  1:10729252‑M2/8‑1 (MQ=255)
       aCGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaa                                                                                               <  1:7662036‑M2/101‑5 (MQ=255)
        aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTg                                                                                              >  1:8875544‑M2/93‑101 (MQ=255)
        aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTg                                                                                              <  1:10115700‑M2/9‑1 (MQ=255)
         ggCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaagg                                                                                             >  1:1085904‑M2/1‑95 (MQ=255)
           cagcaAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCa                                                                                           >  1:8438121/1‑101 (MQ=255)
            atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCaa                                                                                          <  1:2355072‑M2/13‑1 (MQ=255)
             tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCaaa                                                                                         <  1:4173061‑M2/14‑1 (MQ=255)
             gcaAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCaaa                                                                                         <  1:5036342/101‑1 (MQ=255)
             gcaAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCaaa                                                                                         <  1:2680005/101‑1 (MQ=255)
              ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAg                                                                                        >  1:12620465‑M2/87‑101 (MQ=255)
              caAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcga                                                                                        >  1:11141466‑M2/1‑90 (MQ=255)
               aaaGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTATAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAgg                                                                                       >  1:11046307/1‑101 (MQ=255)
                 aGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaaca                                                                                     <  1:6217119‑M2/101‑15 (MQ=255)
                   aCGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaag                                                                                   >  1:12164564‑M2/1‑85 (MQ=255)
                    cGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCtt                                                                                  >  1:13212701/1‑101 (MQ=255)
                     gtgtTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtc                                                                                 <  1:189751‑M2/101‑19 (MQ=255)
                      gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTct                                                                                >  1:6086680‑M2/79‑101 (MQ=255)
                      gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTct                                                                                <  1:10643741‑M2/23‑1 (MQ=255)
                      gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTct                                                                                <  1:13638317‑M2/23‑1 (MQ=255)
                          cGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctga                                                                            <  1:3607184‑M2/101‑24 (MQ=255)
                           aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCtgctgc                                                                           >  1:3477238‑M2/74‑101 (MQ=255)
                            tACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgata                                                                          <  1:5339339‑M2/101‑26 (MQ=255)
                             acacTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatat                                                                         >  1:1341410‑M2/1‑75 (MQ=255)
                             acacTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCaa                                                                         >  1:10462010/1‑101 (MQ=255)
                             acacTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCaa                                                                         <  1:12036316/101‑1 (MQ=255)
                              cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCaaa                                                                        >  1:8003025‑M2/71‑101 (MQ=255)
                              cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCaaa                                                                        <  1:2767828‑M2/31‑1 (MQ=255)
                              cacTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatg                                                                        >  1:14242412‑M2/1‑74 (MQ=255)
                               acTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatga                                                                       >  1:381501‑M2/1‑73 (MQ=255)
                               acTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAAc                                                                       <  1:3102086/101‑1 (MQ=255)
                               acTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAAc                                                                       >  1:9846866/1‑101 (MQ=255)
                                 ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGt                                                                     >  1:13078055‑M2/68‑101 (MQ=255)
                                  tctcTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTa                                                                    <  1:9182797/101‑1 (MQ=255)
                                   caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTaa                                                                   >  1:329279‑M2/66‑101 (MQ=255)
                                    tctGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatca                                                                  >  1:12219148‑M2/1‑68 (MQ=255)
                                        atgaagaaatgaaatgactgattcagccgagaagaatttccccgcttattcgccccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGct                                                              <  1:9075714‑M2/41‑1 (MQ=255)
                                         tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCACTTCTGCTGCAAACGTAATCGctc                                                             >  1:11756401‑M2/60‑101 (MQ=255)
                                           tCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                           >  1:3050273‑M2/1‑61 (MQ=255)
                                            ccAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGt                                                          >  1:6503359/1‑101 (MQ=255)
                                            agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGt                                                          >  1:13479349‑M2/57‑101 (MQ=255)
                                             gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTa                                                         <  1:5950082‑M2/46‑1 (MQ=255)
                                             cAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                         >  1:1026340‑M2/1‑59 (MQ=255)
                                               aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAg                                                       >  1:7794927‑M2/54‑101 (MQ=255)
                                                aCTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                      <  1:4836781‑M2/101‑46 (MQ=255)
                                                 tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGAt                                                     <  1:9253933‑M2/50‑1 (MQ=255)
                                                    aTGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                  >  1:194251‑M2/1‑52 (MQ=255)
                                                    aTGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                  <  1:11495535‑M2/101‑50 (MQ=255)
                                                     atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGt                                                 <  1:3199734‑M2/54‑1 (MQ=255)
                                                      ggTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                >  1:4359806‑M2/1‑50 (MQ=255)
                                                       gTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                               >  1:3420566‑M2/1‑49 (MQ=255)
                                                         tttAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGc                                             <  1:4066538/101‑1 (MQ=255)
                                                           gagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCaa                                           >  1:2908608‑M2/42‑101 (MQ=255)
                                                             gtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGa                                         <  1:1635983‑M2/62‑1 (MQ=255)
                                                             gtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGa                                         <  1:8332058‑M2/62‑1 (MQ=255)
                                                              aaCTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                        <  1:2233621‑M2/101‑60 (MQ=255)
                                                               cagccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAAt                                       >  1:13352192‑M2/38‑101 (MQ=255)
                                                                agccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAAtt                                      <  1:5677424‑M2/65‑1 (MQ=255)
                                                                agccgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAAtt                                      <  1:6308686‑M2/65‑1 (MQ=255)
                                                                   cgagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaa                                   >  1:13836487‑M2/34‑101 (MQ=255)
                                                                    tGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaaa                                  >  1:11404702/1‑101 (MQ=255)
                                                                    gagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaaa                                  <  1:12747135‑M2/69‑1 (MQ=255)
                                                                    gagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaaa                                  >  1:3943500‑M2/33‑101 (MQ=255)
                                                                    gagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaaa                                  >  1:1817004‑M2/33‑101 (MQ=255)
                                                                    gagaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTAAGCAAGAATTCaaa                                  >  1:1000040‑M2/33‑101 (MQ=255)
                                                                     gCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                 <  1:2117306‑M2/101‑67 (MQ=255)
                                                                     agaagaatttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCaaaa                                 <  1:7002701‑M2/70‑1 (MQ=255)
                                                                      cTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                >  1:6598471‑M2/1‑34 (MQ=255)
                                                                       tGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                               <  1:12991188‑M2/101‑69 (MQ=255)
                                                                        gAAGGTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                              <  1:13775884‑M2/101‑70 (MQ=255)
                                                                         aaGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCg                             <  1:11330826/101‑1 (MQ=255)
                                                                            gTCAGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                          <  1:12492857‑M2/101‑74 (MQ=255)
                                                                             ttccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTa                         >  1:7096650‑M2/24‑101 (MQ=255)
                                                                              tccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTaa                        <  1:13956755‑M2/79‑1 (MQ=255)
                                                                               ccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAAt                       >  1:1536623‑M2/22‑101 (MQ=255)
                                                                               ccccgcttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAAt                       >  1:11997272‑M2/22‑101 (MQ=255)
                                                                               aGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                       <  1:8209818‑M2/101‑77 (MQ=255)
                                                                               aGCGCGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                       <  1:11663537‑M2/101‑77 (MQ=255)
                                                                               aGCGCGTAGAGTTCGAAATCACTAACGGAGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAAt                       >  1:9383160/1‑101 (MQ=255)
                                                                                gcgcGTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                      <  1:4560244‑M2/101‑78 (MQ=255)
                                                                                 cgcgTAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                     <  1:6960379‑M2/101‑79 (MQ=255)
                                                                                     ttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCgg                 >  1:4667672‑M2/16‑101 (MQ=255)
                                                                                     ttattcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCgg                 <  1:5464057‑M2/86‑1 (MQ=255)
                                                                                     tAGAGTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                 <  1:7171690‑M2/101‑83 (MQ=255)
                                                                                      agagTTCGAAATCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaactt                <  1:12266417‑M2/101‑84 (MQ=255)
                                                                                       attcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGt               >  1:9553155‑M2/14‑101 (MQ=255)
                                                                                        ttcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGAAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGtt              >  1:10043662‑M2/13‑101 (MQ=255)
                                                                                         tcgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGttt             >  1:14092144‑M2/12‑101 (MQ=255)
                                                                                          cgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGtttt            >  1:2609097‑M2/11‑101 (MQ=255)
                                                                                          cgcaccttccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGtttt            >  1:4485044‑M2/11‑101 (MQ=255)
                                                                                           tCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGttttt           >  1:8641921/1‑101 (MQ=255)
                                                                                                 tCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTGGt     >  1:10227646/1‑101 (MQ=255)
                                                                                                  ccCTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTGGTc    >  1:2521066‑M2/3‑101 (MQ=255)
                                                                                                    |                                                                                                    
CCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAAGATACGTCAGCAAGAATTCAAAACCCGCTTAATCAGCGGGTTTTTTTTGGTCTT  >  NC_007779/657777‑657977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.