BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 290625	NA (NA)	19 (0.070)	16/180	NT	7.0%	intergenic (‑55/‑99)	insA/yagJ	IS1 repressor protein InsA/hypothetical protein
*	?	NC_007779	= 1909285	254 (0.910)	19 (0.070)	16/180	NT	7.0%	coding (21/144 nt)	yobF	hypothetical protein

Only 100 of 326 total aligned reads displayed.

GGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTC  >  NC_007779/1909185‑1909385

ggCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGActtct                                                                                                      >  1:11737278/1‑101 (MQ=255)

 gCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGActtctt                                                                                                     <  1:2513386/101‑1 (MQ=255)

 gCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGActtctt                                                                                                     <  1:8611998/101‑1 (MQ=255)

 gCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGActtctt                                                                                                     >  1:5730485/1‑101 (MQ=255)

   aTAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTa                                                                                                   <  1:2916540/101‑1 (MQ=255)

   aTAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTa                                                                                                   >  1:13873058/1‑101 (MQ=255)

   aTAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTa                                                                                                   >  1:4558040/1‑101 (MQ=255)

      aCATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTg                                                                                                >  1:8439820/1‑101 (MQ=255)

      aCATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTNACTg                                                                                                <  1:3498643/101‑1 (MQ=255)

        aTAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGaa                                                                                              >  1:4036425/1‑101 (MQ=255)

         tAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGaaa                                                                                             <  1:7104159/101‑1 (MQ=255)

          aGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGaaaa                                                                                            >  1:12200935/1‑101 (MQ=255)

             tAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGc                                                                                         >  1:10141793/1‑101 (MQ=255)

               aaaCTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCca                                                                                       <  1:13264661/101‑1 (MQ=255)

                aaCTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCcac                                                                                      <  1:11218318/101‑1 (MQ=255)

                 aCTGATACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCcaca                                                                                     >  1:9429030/1‑101 (MQ=255)

                  cTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCcacac                                                                                    <  1:10022985/101‑1 (MQ=255)

                     acacATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATa                                                                                 <  1:740166/101‑1 (MQ=255)

                     acacATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATa                                                                                 <  1:298688/101‑1 (MQ=255)

                      cacaTTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATaa                                                                                <  1:5516564/101‑1 (MQ=255)

                       acaTTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATaaa                                                                               <  1:11950191/101‑1 (MQ=255)

                          ttACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAg                                                                            <  1:11432975/101‑1 (MQ=255)

                           tACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGa                                                                           >  1:5317364/1‑101 (MQ=255)

                            aCTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGaa                                                                          >  1:170019/1‑101 (MQ=255)

                                cATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGt                                                                      >  1:5359711/1‑101 (MQ=255)

                                cATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGt                                                                      >  1:428549/1‑101 (MQ=255)

                                 aTGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTa                                                                     >  1:1364051/1‑101 (MQ=255)

                                  tGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTAc                                                                    <  1:8070286/101‑1 (MQ=255)

                                   gAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTAcc                                                                   >  1:6025273/1‑101 (MQ=255)

                                    aGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCt                                                                  >  1:10844542/1‑101 (MQ=255)

                                     ggCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTc                                                                 >  1:3550279/1‑101 (MQ=255)

                                      gCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCg                                                                <  1:4804360/101‑1 (MQ=255)

                                      gCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCg                                                                <  1:6628624/101‑1 (MQ=255)

                                      gCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCg                                                                <  1:6501393/101‑1 (MQ=255)

                                       cACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGt                                                               >  1:5568682/1‑101 (MQ=255)

                                       cACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGt                                                               <  1:8373376/101‑1 (MQ=255)

                                        aCCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGtt                                                              >  1:2464690/1‑101 (MQ=255)

                                        aCCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGtt                                                              <  1:4199462/101‑1 (MQ=255)

                                         ccAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGttt                                                             <  1:7685515/101‑1 (MQ=255)

                                            gggcattatctgaacataaaacactatcaataagttggagtcattacCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAAc                                                          >  1:11548762‑M1/48‑101 (MQ=255)

                                              ataAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAAccc                                                        >  1:7156699/1‑101 (MQ=255)

                                              ataAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAAccc                                                        <  1:1675263/101‑1 (MQ=255)

                                               taAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCg                                                       <  1:12449380/101‑1 (MQ=255)

                                                 aGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGaa                                                     >  1:12104068/1‑101 (MQ=255)

                                                    tctgaacataaaacactatcaataagttggagtcattacCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATc                                                  <  1:12921462‑M1/62‑1 (MQ=255)

                                                    cTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATc                                                  <  1:9399764/101‑1 (MQ=255)

                                                     tCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCt                                                 <  1:1584144/101‑1 (MQ=255)

                                                      cGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTg                                                <  1:4353995/101‑1 (MQ=255)

                                                       ggCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGt                                               <  1:1429748/101‑1 (MQ=255)

                                                       ggCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGt                                               >  1:13497419/1‑101 (MQ=255)

                                                        gCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGtt                                              <  1:7964546/101‑1 (MQ=255)

                                                        gCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGtt                                              <  1:13466256/101‑1 (MQ=255)

                                                         cAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTa                                             >  1:631558/1‑101 (MQ=255)

                                                          agagAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTAt                                            >  1:10661225/1‑101 (MQ=255)

                                                           gagaAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATc                                           <  1:11145771/101‑1 (MQ=255)

                                                            agaAGCGGTATTTAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATca                                          >  1:3761172/1‑101 (MQ=255)

                                                            agaAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATca                                          >  1:3349621/1‑101 (MQ=255)

                                                              aaGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATcaca                                        >  1:5451632/1‑101 (MQ=255)

                                                              aaGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATcaca                                        <  1:8789790/101‑1 (MQ=255)

                                                                 cGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATAc                                     <  1:6878859/101‑1 (MQ=255)

                                                                  ggTATTCAACGTCAACGTGTTTACTCAGGACTTCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                    <  1:14115362‑M2/101‑67 (MQ=255)

                                                                   gTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACaa                                   >  1:1875665/1‑101 (MQ=255)

                                                                   gTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACaa                                   >  1:5276448/1‑101 (MQ=255)

                                                                    tatcaataagttggagtcattacCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAAc                                  >  1:13289015‑M1/24‑101 (MQ=255)

                                                                    tATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAAc                                  >  1:12856525/1‑101 (MQ=255)

                                                                        caacgtcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTa                              <  1:2104575/101‑1 (MQ=255)

                                                                        caacgtcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACAAACAACGTTa                              <  1:2323733/101‑1 (MQ=255)

                                                                         aacgtcaacgtGTTTACTCAGGACTTCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                             <  1:11268540‑M2/101‑74 (MQ=255)

                                                                         aacgtcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTaa                             <  1:1992434/101‑1 (MQ=255)

                                                                         aacgtcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTaa                             <  1:12798544/101‑1 (MQ=255)

                                                                             tcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTAt                         <  1:9112703/101‑1 (MQ=255)

                                                                             tcaacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTAt                         <  1:10714274/101‑1 (MQ=255)

                                                                              caacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTCCCTCGTTTAACCCGAAATCTGTTAGCACATACAACGTTAATTATg                        <  1:9167071/101‑1 (MQ=255)

                                                                              caacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATg                        >  1:5043306/1‑101 (MQ=255)

                                                                              caacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATg                        >  1:3220415/1‑101 (MQ=255)

                                                                              caacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATg                        <  1:11082597/101‑1 (MQ=255)

                                                                               aacgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATgg                       >  1:3270412/1‑101 (MQ=255)

                                                                                acgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGc                      >  1:597298/1‑101 (MQ=255)

                                                                                 gagtcattacCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCa                     <  1:6762970‑M1/91‑1 (MQ=255)

                                                                                 cgtGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCa                     >  1:1268468/1‑101 (MQ=255)

                                                                                   tgtTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAg                   >  1:11347317/1‑101 (MQ=255)

                                                                                     tttACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGcc                 >  1:2856372/1‑101 (MQ=255)

                                                                                      ttACTCAGGACTTCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct                >  1:9805188‑M2/1‑15 (MQ=255)

                                                                                      ttACTCAGGACTTCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct                >  1:6824816‑M2/1‑15 (MQ=255)

                                                                                      ttACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCa                >  1:778489/1‑101 (MQ=255)

                                                                                      ttACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCa                <  1:1800481/101‑1 (MQ=255)

                                                                                       tACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCAt               >  1:6271184/1‑101 (MQ=255)

                                                                                         cTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCAttt             >  1:5827543/1‑101 (MQ=255)

                                                                                          tCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCAtttt            <  1:2396422/101‑1 (MQ=255)

                                                                                           CAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCAttttt           >  1:10335367‑M1/1‑101 (MQ=255)

                                                                                            aGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTa          >  1:1233593/1‑101 (MQ=255)

                                                                                             ggACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTaa         >  1:4501229/1‑101 (MQ=255)

                                                                                              gACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTaaa        <  1:3972793/101‑1 (MQ=255)

                                                                                               aCTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAAc       >  1:9702033/1‑101 (MQ=255)

                                                                                                 ttcttTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACAt     <  1:9940703/101‑1 (MQ=255)

                                                                                                 ttcttTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACAt     >  1:3244732/1‑101 (MQ=255)

                                                                                                  tcttTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATg    <  1:10207692/101‑1 (MQ=255)

                                                                                                   cttTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGt   >  1:12613051/1‑101 (MQ=255)

                                                                                                   cttTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGt   >  1:2772001/1‑101 (MQ=255)

                                                                                                    tttACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGtc  <  1:7278750/101‑1 (MQ=255)

GGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTC  >  NC_007779/1909185‑1909385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.