| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 1909337 | 237 (1.110) | 22 (0.100) | 20/180 | NT | 8.5% | intergenic (‑32/+638) | yobF/yebO | hypothetical protein/hypothetical protein |
| ? | NC_007779 | = 2412225 | NA (NA) | intergenic (‑55/‑782) | insA/yfbQ | IS1 element protein/aminotransferase | |||||
GGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/1909240‑1909337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < NC_007779/2412225‑2412136 GGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGT < 1:2028395/101‑1 AGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGAT > 1:5860418/1‑101 GAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATG > 1:6990223/1‑101 GAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCT < 1:3620737/101‑1 CGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGAT < 1:9776269/101‑1 CGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGAT < 1:3030547/101‑1 TCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTT > 1:6145121/1‑101 AACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAG < 1:10405748/101‑1 GTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACACCACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGT > 1:4913488/1‑101 TTACTCAGGACTTCTTTACTGAAAATGCCATACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGA < 1:552507/101‑1 ACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG > 1:6013895/1‑101 ACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG > 1:8044610/1‑101 CAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTG < 1:6422817/101‑1 TTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGT < 1:4085924/101‑1 CTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCT > 1:6097609/1‑101 GAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCC > 1:4047832/1‑101 ATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTG < 1:2182408/101‑1 CACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTATTTTTGAGGTGCTCCAGTGGCTT < 1:9574321/101‑1 CACATAAACAGAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCT < 1:2451985/101‑1 GAACTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA > 1:3995981/1‑101 CTGTACCTCGTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCT > 1:3706224/1‑101 GTTTAACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCT < 1:1791620/101‑1 AACCCGAAATCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < 1:7493044/101‑1 GGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_007779/1909240‑1909337‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTC < NC_007779/2412225‑2412136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |