New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 37505901 (0.000)305 (1.100) 136/172 NT 99.8% intergenic (‑104/‑69) tnaA/insH tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein
?NC_007779 3751790 = 0 (0.000)intergenic (+151/+116) insH/tnaC IS5 element protein/tryptophanase leader peptide

Only 100 of 340 total aligned reads displayed.

ATAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_007779/3750490‑3750688
                                                                                                    |                                                                                                  
 tAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAa                                                                                                   <  1:7687445‑M1/101‑2 (MQ=255)
 tAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAa                                                                                                   >  1:6651885‑M1/1‑100 (MQ=255)
  aaTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaa                                                                                                  >  1:12246416‑M1/1‑99 (MQ=255)
    tCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaaca                                                                                                >  1:10467223‑M1/1‑97 (MQ=255)
    tCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaaca                                                                                                >  1:8136733‑M1/1‑97 (MQ=255)
        tCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagta                                                                                            <  1:10307511‑M1/101‑9 (MQ=255)
        tCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagta                                                                                            >  1:10908091‑M1/1‑93 (MQ=255)
         cATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaa                                                                                           <  1:4584560‑M1/101‑10 (MQ=255)
           tttatttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaat                                                                                         <  1:2158714‑M1/101‑12 (MQ=255)
             tatttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataa                                                                                       <  1:7551589‑M1/101‑14 (MQ=255)
              atttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaa                                                                                      >  1:13581113‑M1/1‑87 (MQ=255)
              atttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaa                                                                                      >  1:11826313‑M1/1‑87 (MQ=255)
               ttttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaac                                                                                     >  1:8647147‑M1/1‑86 (MQ=255)
               ttttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaac                                                                                     >  1:7374114‑M1/1‑86 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                    <  1:5262263‑M1/101‑17 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                    >  1:11343427‑M1/1‑85 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                    <  1:3884720‑M1/101‑17 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                    >  1:3508267‑M1/1‑85 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                    >  1:2027324‑M1/1‑85 (MQ=255)
                 ttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacga                                                                                   <  1:2282987‑M1/101‑18 (MQ=255)
                  tAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgag                                                                                  <  1:12600523‑M1/101‑19 (MQ=255)
                  tAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgag                                                                                  <  1:1751354‑M1/101‑19 (MQ=255)
                  tAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgag                                                                                  >  1:14307304‑M1/1‑83 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                 >  1:10106827‑M1/1‑82 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                 >  1:965616‑M1/1‑82 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                 >  1:10650917‑M1/1‑82 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                 >  1:6802997‑M1/1‑82 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                 >  1:245555‑M1/1‑82 (MQ=255)
                     ttACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagaga                                                                               >  1:3689996‑M1/1‑80 (MQ=255)
                     ttACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagaga                                                                               >  1:12376278‑M1/1‑80 (MQ=255)
                      tACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagat                                                                              <  1:14020709‑M1/101‑23 (MQ=255)
                      tACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagat                                                                              >  1:13345811‑M1/1‑79 (MQ=255)
                      tACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagat                                                                              <  1:2883181‑M1/101‑23 (MQ=255)
                        cAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatga                                                                            >  1:13070330‑M1/1‑77 (MQ=255)
                           tGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacct                                                                         >  1:5459555‑M1/1‑74 (MQ=255)
                            gATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctt                                                                        <  1:4126321‑M1/101‑29 (MQ=255)
                             aTCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgaccttt                                                                       <  1:3993818‑M1/101‑30 (MQ=255)
                             aTCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgaccttt                                                                       >  1:6005313‑M1/1‑72 (MQ=255)
                              tCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttg                                                                      >  1:4273799‑M1/1‑71 (MQ=255)
                               cccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgc                                                                     >  1:12156246‑M1/1‑70 (MQ=255)
                               cccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgc                                                                     <  1:3029160‑M1/101‑32 (MQ=255)
                                ccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgca                                                                    <  1:3000805‑M1/101‑33 (MQ=255)
                                ccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgca                                                                    <  1:10956083‑M1/101‑33 (MQ=255)
                                ccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgca                                                                    >  1:12701660‑M1/1‑69 (MQ=255)
                                 cTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaa                                                                   >  1:8930976‑M1/1‑68 (MQ=255)
                                    tgAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaag                                                                >  1:6523345‑M1/1‑65 (MQ=255)
                                      aaTATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggc                                                              <  1:9369218‑M1/101‑39 (MQ=255)
                                      aaTATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggc                                                              <  1:9504715‑M1/101‑39 (MQ=255)
                                      aaTATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggc                                                              <  1:6352112‑M1/101‑39 (MQ=255)
                                        tatTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaa                                                            >  1:6970394‑M1/1‑61 (MQ=255)
                                          ttACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaa                                                          >  1:4741797‑M1/1‑59 (MQ=255)
                                          ttACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaa                                                          <  1:10029424‑M1/101‑43 (MQ=255)
                                           tACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaat                                                         >  1:12621985‑M1/1‑58 (MQ=255)
                                            aCATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaatt                                                        >  1:8446693‑M1/1‑57 (MQ=255)
                                             cATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaatta                                                       <  1:12097449‑M1/101‑46 (MQ=255)
                                                cTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaaga                                                    <  1:12885194‑M1/101‑49 (MQ=255)
                                                 tGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagat                                                   <  1:4094270‑M1/101‑50 (MQ=255)
                                                  gCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagata                                                  <  1:4982670‑M1/101‑51 (MQ=255)
                                                  gCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagata                                                  >  1:4504659‑M1/1‑51 (MQ=255)
                                                   cTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatat                                                 <  1:13151926‑M1/101‑52 (MQ=255)
                                                    tataCCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatata                                                >  1:933344‑M1/1‑49 (MQ=255)
                                                       aCCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagca                                             >  1:4792305‑M1/1‑46 (MQ=255)
                                                        ccGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaa                                            <  1:14228722‑M1/101‑57 (MQ=255)
                                                          gATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaac                                          <  1:13538990‑M1/101‑59 (MQ=255)
                                                          gATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaac                                          >  1:11934508‑M1/1‑43 (MQ=255)
                                                           aTTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaaca                                         <  1:14541922‑M1/101‑60 (MQ=255)
                                                            ttAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaa                                        <  1:4488783‑M1/101‑61 (MQ=255)
                                                            ttAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaa                                        >  1:10829196‑M1/1‑41 (MQ=255)
                                                             tAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaa                                       >  1:8821840‑M1/1‑40 (MQ=255)
                                                               aTTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaata                                     <  1:13721637‑M1/101‑64 (MQ=255)
                                                                ttCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatag                                    <  1:3772168‑M1/101‑65 (MQ=255)
                                                                  cGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagat                                  >  1:8592210‑M1/1‑35 (MQ=255)
                                                                     cAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcac                               >  1:12937866‑M1/1‑32 (MQ=255)
                                                                         tatatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattg                           >  1:13798775‑M1/1‑28 (MQ=255)
                                                                          atatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattga                          <  1:7269649‑M1/101‑75 (MQ=255)
                                                                           tatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaa                         <  1:3420489‑M1/101‑76 (MQ=255)
                                                                              atGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatct                      >  1:12450481‑M1/1‑23 (MQ=255)
                                                                              atGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatct                      >  1:11059156‑M1/1‑23 (MQ=255)
                                                                                gCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaa                    <  1:13872849‑M1/101‑81 (MQ=255)
                                                                                gCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaa                    >  1:5868056‑M1/1‑21 (MQ=255)
                                                                                gCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaa                    <  1:5761825‑M1/101‑81 (MQ=255)
                                                                                gCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaa                    <  1:3302639‑M1/101‑81 (MQ=255)
                                                                                gCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaa                    <  1:7852323‑M1/101‑81 (MQ=255)
                                                                                 cAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaat                   >  1:3955273‑M1/1‑20 (MQ=255)
                                                                                  aaGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatc                  <  1:10533401‑M1/101‑83 (MQ=255)
                                                                                  aaGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatc                  >  1:11257181‑M1/1‑19 (MQ=255)
                                                                                   aGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcg                 <  1:6460363‑M1/101‑84 (MQ=255)
                                                                                    gCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcgg                >  1:11554402‑M1/1‑17 (MQ=255)
                                                                                       ccATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggttt             <  1:1852436‑M1/101‑88 (MQ=255)
                                                                                       ccATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggttt             >  1:14330010‑M1/1‑14 (MQ=255)
                                                                                       ccATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggttt             >  1:8848744‑M1/1‑14 (MQ=255)
                                                                                        catcatTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttg            <  1:1618577‑M1/101‑89 (MQ=255)
                                                                                         atcatTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttgg           >  1:6165297‑M1/1‑12 (MQ=255)
                                                                                           catTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggct         <  1:8240623‑M1/101‑92 (MQ=255)
                                                                                            atTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctc        <  1:9831599‑M1/101‑93 (MQ=255)
                                                                                             tttACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctct       <  1:9062025‑M1/101‑94 (MQ=255)
                                                                                              ttACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctg      <  1:5095922‑M1/101‑95 (MQ=255)
                                                                                                aCTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggt    >  1:12767860‑M1/1‑5 (MQ=255)
                                                                                                 cTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtg   >  1:6563806‑M1/1‑4 (MQ=255)
                                                                                                  tAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtga  >  1:7065752‑M1/1‑3 (MQ=255)
                                                                                                    |                                                                                                  
ATAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT  >  NC_007779/3750490‑3750688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.