| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,122 | Δ1 bp | 95.5% | coding (365/1416 nt) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,122 | 0 | C→. | 95.5% | 65.5 ‑2.9 ‑2.8 | 314 | coding (365/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (146/154): ref base (3/11): total (149/165) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.63e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.49e-03 | ||||||||||
Only 100 of 319 total aligned reads displayed.
GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 | atatAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGct < 1:985411/101‑2 (MQ=255) ataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtt < 1:12504039/101‑1 (MQ=255) taGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttt < 1:14260454/101‑1 (MQ=255) aGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtttt > 1:1442341/1‑101 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc > 1:7833846/1‑100 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc > 1:3972062/1‑100 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc < 1:7268511/101‑2 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:13008837/101‑1 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:4922571/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg < 1:2216605/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg > 1:12018109/1‑101 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg > 1:1057875/1‑101 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc < 1:1677458/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTTCTGCTc < 1:10359332/101‑1 (MQ=255) aCGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGt > 1:4139709/1‑101 (MQ=255) cGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtt < 1:12855574/101‑1 (MQ=255) ggTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttt < 1:12196960/101‑1 (MQ=255) ggTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttt > 1:8253224/1‑101 (MQ=255) aCAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttttt < 1:13326729/101‑1 (MQ=255) aCAGCCGTTGATCTGGATATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttttt > 1:3864459/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa < 1:10299784/101‑1 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCGCCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa < 1:6940864/101‑1 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:10535667/1‑101 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:9300763/1‑101 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:7474713/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg > 1:3329239/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg < 1:12582459/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg > 1:8971956/1‑101 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGt > 1:3090711/1‑101 (MQ=255) tGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTa > 1:5308423/1‑101 (MQ=255) gATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTAc < 1:5480937/101‑1 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGa < 1:9135050/101‑1 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGaa < 1:12401091/101‑1 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGaa < 1:10925402/101‑1 (MQ=255) gCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAat < 1:10989624/101‑1 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAatat > 1:11458897/1‑101 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata < 1:10048012/101‑1 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:10215386/1‑101 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:7405616/1‑101 (MQ=255) tGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAg > 1:13094270/1‑101 (MQ=255) tGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTAATCAGTACCGGAATATAGa < 1:11043432/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:4298152/101‑1 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAt > 1:801857/1‑101 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc > 1:7237700/1‑101 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc > 1:8455179/1‑101 (MQ=255) gCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGct < 1:11655090/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:11161783/1‑101 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTg < 1:11295765/101‑1 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATCGATTTGCTCTGCGCCACg > 1:9921371/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:3539692/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:2988491/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:9403037/1‑101 (MQ=255) aaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACgg < 1:5853062/101‑1 (MQ=255) aaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACgg > 1:6394097/1‑101 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc < 1:12756500/101‑1 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc < 1:205593/101‑1 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc > 1:9483858/1‑101 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc > 1:2683918/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:6132106/101‑1 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:1391629/101‑1 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg > 1:2840238/1‑101 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg < 1:8606905/101‑1 (MQ=255) aTAGTTAGAGAACGCCACCATTGTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCATGGCCCTg < 1:9631242/101‑1 (MQ=255) aGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGt > 1:1808621/1‑101 (MQ=255) gTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTg < 1:1765231/101‑1 (MQ=255) ttAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGa < 1:6582315/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg < 1:8374993/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg > 1:1489543/1‑101 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg < 1:7865469/101‑1 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc > 1:13231811/1‑101 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg > 1:5071356/1‑101 (MQ=255) gaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCgg > 1:8205696/1‑101 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa < 1:6000541/101‑1 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa > 1:5393566/1‑101 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa > 1:4058741/1‑101 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:7773281/1‑101 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:11731478/1‑101 (MQ=255) ccaccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATgg > 1:12248817/1‑101 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:3755159/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:8880095/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt > 1:160565/1‑101 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt > 1:14592588/1‑101 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:13369701/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt < 1:12127235/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt > 1:6995344/1‑101 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt > 1:6497226/1‑101 (MQ=255) ttttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAtt > 1:13573740/1‑101 (MQ=255) ttttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAtt < 1:6726424/101‑1 (MQ=255) ttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGa < 1:11914809/101‑1 (MQ=255) ttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGa < 1:2568672/101‑1 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt < 1:7660396/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa > 1:8529939/1‑101 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa > 1:4601916/1‑101 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:3686306/101‑1 (MQ=255) ctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATaa < 1:4521927/101‑1 (MQ=255) ctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATaa < 1:3272230/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:11555863/101‑1 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:5640807/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:5185405/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:137020/1‑101 (MQ=255) | GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |