New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)286 (1.010) 138/178 NT 98.6% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 4 (0.010)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 751 total aligned reads displayed.

CGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512654‑3512853
                                                                                                   |                                                                                                    
  tAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatt                                                                                                   >  1:5615973/1‑101 (MQ=255)
  agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatc                                                                                                   <  1:5927510‑M2/4‑2 (MQ=255)
  agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:8678968‑M2/98‑101 (MQ=255)
   gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatatagggacaaatccAatta                                                                                                  >  1:10025971‑M2/97‑101 (MQ=255)
   aaTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatta                                                                                                  >  1:6817729/1‑101 (MQ=255)
    tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgc                                                                                                 <  1:12196760‑M2/6‑4 (MQ=255)
    tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgc                                                                                                 <  1:11426272‑M2/6‑4 (MQ=255)
    aTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAattat                                                                                                 >  1:637042/1‑101 (MQ=255)
     tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                >  1:10906722‑M1/1‑101 (MQ=255)
     tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT                                                                                                <  1:2710565‑M1/101‑1 (MQ=255)
     gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattatt                                                                                                >  1:6902222‑M2/95‑101 (MQ=255)
      agctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattt                                                                                               >  1:7966894‑M2/94‑101 (MQ=255)
        gccgccGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTaga                                                                                             <  1:12338539‑M1/101‑4 (MQ=255)
         tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatcg                                                                                            <  1:13317288‑M2/11‑9 (MQ=255)
         tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            <  1:10592932‑M2/11‑1 (MQ=255)
          gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTatat                                                                                           >  1:8361684‑M2/90‑101 (MQ=255)
            gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaat                                                                                         <  1:10245282‑M2/14‑9 (MQ=255)
            gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaat                                                                                         <  1:2919166‑M2/14‑9 (MQ=255)
            gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGa                                                                                         >  1:13822133‑M2/88‑101 (MQ=255)
            gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGa                                                                                         <  1:12822144‑M2/14‑1 (MQ=255)
             ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAg                                                                                        <  1:13567346‑M2/15‑1 (MQ=255)
             cgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggc                                                                                        <  1:8844986‑M1/101‑9 (MQ=255)
              tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaatat                                                                                       >  1:10325928‑M2/86‑91 (MQ=255)
              tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGGGc                                                                                       >  1:11023090‑M2/86‑101 (MQ=255)
              gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       <  1:7382968‑M1/101‑10 (MQ=255)
               aTGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccc                                                                                      >  1:6107341‑M1/1‑91 (MQ=255)
                  gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   >  1:9117174‑M1/1‑88 (MQ=255)
                      gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCAt                                                                               >  1:508731‑M2/78‑101 (MQ=255)
                      gccacgggaagatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCAt                                                                               >  1:14311723‑M2/78‑101 (MQ=255)
                       tatgaacgaatttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatc                                                                              >  1:897364‑M1/4‑83 (MQ=255)
                        gCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatct                                                                             <  1:5034603‑M1/101‑20 (MQ=255)
                          cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                           <  1:5729962‑M2/28‑1 (MQ=255)
                           aacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcca                                                                          <  1:8226995‑M1/101‑23 (MQ=255)
                             cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                        <  1:13990502‑M1/101‑25 (MQ=255)
                               atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGAtt                                                                      <  1:2542376‑M2/33‑1 (MQ=255)
                                tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg                                                                     <  1:28117‑M2/34‑1 (MQ=255)
                                      aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                               <  1:4954896‑M1/101‑34 (MQ=255)
                                       ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtat                                                              >  1:7480536‑M2/61‑101 (MQ=255)
                                        gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtata                                                             <  1:3350816‑M2/42‑1 (MQ=255)
                                         cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAg                                                            >  1:12569917‑M2/59‑101 (MQ=255)
                                          agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           >  1:12906976‑M2/58‑101 (MQ=255)
                                          agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           >  1:11282076‑M2/58‑101 (MQ=255)
                                          agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           <  1:11117935‑M2/44‑1 (MQ=255)
                                            cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                         >  1:134572‑M2/56‑101 (MQ=255)
                                             gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                        >  1:3008484‑M2/55‑101 (MQ=255)
                                              tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       <  1:14564679‑M1/101‑42 (MQ=255)
                                              tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       >  1:2311386‑M1/1‑60 (MQ=255)
                                              tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       >  1:4535207‑M1/1‑60 (MQ=255)
                                               ggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaa                                                      <  1:12397393‑M1/101‑43 (MQ=255)
                                                  tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCg                                                   >  1:1275068‑M2/50‑101 (MQ=255)
                                                  gctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataa                                                   >  1:13011238‑M1/1‑56 (MQ=255)
                                                   gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGa                                                  >  1:10794654‑M2/49‑101 (MQ=255)
                                                       tgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAagag                                              >  1:11784046‑M2/45‑101 (MQ=255)
                                                          gttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                           >  1:3190141‑M2/42‑101 (MQ=255)
                                                          cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                           <  1:6658933‑M1/101‑54 (MQ=255)
                                                          cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                           <  1:10089933‑M1/101‑54 (MQ=255)
                                                           aGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                          >  1:3726733‑M1/1‑47 (MQ=255)
                                                            taagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGcc                                         >  1:5539467‑M2/40‑101 (MQ=255)
                                                            gTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                         <  1:4095847‑M1/101‑56 (MQ=255)
                                                            gTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                         >  1:4299868‑M1/1‑46 (MQ=255)
                                                             ttCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                        >  1:922831‑M1/1‑45 (MQ=255)
                                                               gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      >  1:6489163‑M2/37‑101 (MQ=255)
                                                               gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      <  1:12535133‑M2/65‑1 (MQ=255)
                                                               gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      >  1:9457443‑M2/37‑101 (MQ=255)
                                                               gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                      <  1:9609645‑M2/65‑1 (MQ=255)
                                                               cATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                      <  1:13120776‑M1/101‑59 (MQ=255)
                                                                 tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                    >  1:10524454‑M1/1‑41 (MQ=255)
                                                                  ataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgtg                                   >  1:3960740‑M2/34‑101 (MQ=255)
                                                                    aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc                                 <  1:2016972‑M2/70‑1 (MQ=255)
                                                                     acagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCa                                <  1:7252591‑M2/71‑1 (MQ=255)
                                                                      aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                               <  1:386250‑M1/101‑66 (MQ=255)
                                                                        gatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTa                             <  1:542121‑M2/74‑1 (MQ=255)
                                                                        aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                             <  1:13213611‑M1/101‑68 (MQ=255)
                                                                         atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            >  1:9793998‑M2/27‑101 (MQ=255)
                                                                         atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            >  1:1670230‑M2/27‑101 (MQ=255)
                                                                          tgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAcc                           <  1:3577179‑M2/76‑1 (MQ=255)
                                                                             gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        >  1:1744925‑M1/1‑29 (MQ=255)
                                                                             ctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGcc                        >  1:627816‑M2/23‑101 (MQ=255)
                                                                               ccgccgCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                      <  1:13917315‑M1/101‑75 (MQ=255)
                                                                               ccgccgCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                      <  1:13739585‑M1/101‑75 (MQ=255)
                                                                                gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc                     <  1:2136923‑M2/82‑1 (MQ=255)
                                                                                cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                     <  1:3510230‑M1/101‑76 (MQ=255)
                                                                                 gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtggtagtcttaatactagtttttagactag                    <  1:7834433‑M1/101‑77 (MQ=255)
                                                                                 gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                    >  1:9699593‑M1/1‑25 (MQ=255)
                                                                                 gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                    <  1:5212008‑M1/101‑77 (MQ=255)
                                                                                 gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                    <  1:1202814‑M1/101‑77 (MQ=255)
                                                                                    tataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg                 >  1:11932785‑M2/16‑101 (MQ=255)
                                                                                      taggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCt               >  1:4801812‑M2/14‑101 (MQ=255)
                                                                                      aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               <  1:4463855‑M1/101‑82 (MQ=255)
                                                                                       aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTa              <  1:2454563‑M2/89‑1 (MQ=255)
                                                                                        ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg             <  1:5337952‑M1/101‑84 (MQ=255)
                                                                                        ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg             >  1:7026833‑M1/1‑18 (MQ=255)
                                                                                            tGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa         <  1:8548193‑M1/101‑88 (MQ=255)
                                                                                            tGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa         <  1:14200239‑M1/101‑88 (MQ=255)
                                                                                             aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa        >  1:11620193‑M2/7‑101 (MQ=255)
                                                                                              cAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca       <  1:7695546‑M1/101‑90 (MQ=255)
                                                                                               aGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag      >  1:1883488‑M1/1‑11 (MQ=255)
                                                                                                tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     >  1:8041842‑M2/4‑101 (MQ=255)
                                                                                                 ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcg    <  1:713561‑M2/99‑1 (MQ=255)
                                                                                                  cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc   >  1:1500541‑M2/2‑101 (MQ=255)
                                                                                                   |                                                                                                    
CGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512654‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.