| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_007779 | 3,746,911 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 3746911 | 3748109–3746912 | 2–1199 | 328 [0] | [0] 327 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 283 (1.180) | 130/172 | NT | 100% | intergenic (‑508/‑69) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | 3748110 = | 0 (0.000) | intergenic (+151/+961) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 327 total aligned reads displayed.
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748013‑3748210 | cgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa < 1:8531255‑M2/4‑1 (MQ=255)cgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:11190334‑M2/98‑101 (MQ=255) gcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAac > 1:10189278‑M2/97‑101 (MQ=255) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca < 1:3803809‑M2/6‑1 (MQ=255) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca > 1:5778424‑M2/96‑101 (MQ=255) ccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac > 1:3003965‑M2/95‑101 (MQ=255) cgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACAcc > 1:843272‑M2/94‑101 (MQ=255) cgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACAcc > 1:11923836‑M2/94‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca > 1:4428052‑M2/93‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca > 1:865887‑M2/93‑101 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag < 1:3411820‑M2/10‑1 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag > 1:6846657‑M2/92‑101 (MQ=255) cgtgggagttatcaatgttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc < 1:4170630‑M2/11‑1 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca < 1:7396070‑M2/12‑1 (MQ=255) ggagttatcaatcttaaacaggtccaccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGc < 1:4752703‑M2/15‑1 (MQ=255) agttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:5247642‑M2/17‑1 (MQ=255) agttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa > 1:2510457‑M2/85‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGTAAAAc > 1:5618218‑M2/82‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:1178754‑M2/82‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc < 1:5982054‑M2/20‑1 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc < 1:4458471‑M2/20‑1 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:8937143‑M2/22‑1 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:1206318‑M2/22‑1 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:8420528‑M2/22‑1 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACtca > 1:10854105‑M2/79‑100 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:6493371‑M2/23‑1 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATaa > 1:6164656‑M2/75‑101 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt < 1:6586497‑M2/28‑1 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt > 1:7314758‑M2/74‑101 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg > 1:961625‑M2/73‑101 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg > 1:6989616‑M2/73‑101 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:9590374‑M2/31‑1 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc > 1:11056927‑M2/71‑101 (MQ=255) acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg < 1:10477222‑M2/32‑1 (MQ=255) acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg < 1:6935990‑M2/32‑1 (MQ=255) gtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCt > 1:5877076‑M2/66‑101 (MQ=255) gtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCt < 1:9793953‑M2/36‑1 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:7808385‑M2/64‑101 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:7112176‑M2/38‑1 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt > 1:3081979‑M2/63‑101 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt > 1:11980999‑M2/62‑101 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAAAACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt > 1:2681752‑M2/62‑101 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTgg > 1:9509417‑M2/60‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:5959717‑M2/59‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt < 1:6437135‑M2/43‑1 (MQ=255) gataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTg < 1:3192394‑M2/44‑1 (MQ=255) taatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGcc > 1:6118192‑M2/56‑101 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg > 1:8117669‑M2/55‑101 (MQ=255) cgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAgg < 1:9913537‑M2/50‑1 (MQ=255) cgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAgg > 1:5704234‑M2/52‑101 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg < 1:12600017‑M2/54‑1 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt < 1:12357772‑M2/58‑1 (MQ=255) ccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTc > 1:6066377‑M2/43‑101 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc > 1:154007‑M2/41‑101 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttggAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc < 1:7718648‑M2/62‑1 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc > 1:4972517‑M2/40‑101 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc > 1:11492390‑M2/40‑101 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc < 1:1987221‑M2/62‑1 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg > 1:7925711‑M2/38‑101 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg > 1:5512347‑M2/38‑101 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc < 1:10368693‑M2/65‑1 (MQ=255) acaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGa < 1:3319769‑M2/67‑1 (MQ=255) ccaaagaacgaactggtaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc < 1:3489620‑M2/70‑1 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc < 1:3894010‑M2/70‑1 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc < 1:8004375‑M2/70‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:1509762‑M2/71‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:3653930‑M2/71‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:4054006‑M2/71‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc > 1:80221‑M2/29‑101 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc < 1:11719370‑M2/73‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc < 1:9838951‑M2/73‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:10047918‑M2/76‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:2040153‑M2/76‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:2228034‑M2/76‑1 (MQ=255) acgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCCTGCTGTTTGGTGCCGAGCAACGATTTCACCAGCGAATCAACGTTg > 1:10600087‑M2/25‑101 (MQ=255) cgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgc < 1:932275‑M2/78‑1 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc > 1:6683086‑M2/23‑101 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc < 1:6302935‑M2/79‑1 (MQ=255) aactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccg > 1:10747905‑M2/22‑101 (MQ=255) aactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccg < 1:2824193‑M2/80‑1 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTg < 1:9111825‑M2/84‑1 (MQ=255) caacagctaagttagAGAACACCGGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag < 1:6738473‑M2/86‑1 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag < 1:7558914‑M2/86‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagg < 1:8165373‑M2/87‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga < 1:2941968‑M2/88‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga < 1:11522088‑M2/88‑1 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTAACCAGCGAATCAACGTTGCCGCCTGAGgaga > 1:1062139‑M2/12‑101 (MQ=255) gctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGAt < 1:1790927‑M2/91‑1 (MQ=255) taagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATaa > 1:3563724‑M2/9‑101 (MQ=255) taagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATaa > 1:7213302‑M2/9‑101 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAAt < 1:3739775‑M2/94‑1 (MQ=255) gttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCg < 1:5829828‑M2/96‑1 (MQ=255) gttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCg < 1:12399167‑M2/96‑1 (MQ=255) gttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCg < 1:5351682‑M2/96‑1 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGc < 1:11304817‑M2/97‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCtt < 1:8745778‑M2/100‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGCGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCtt < 1:12732907‑M2/100‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa > 1:4841039/1‑101 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa < 1:10679835/101‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa < 1:3249942/101‑1 (MQ=255) | AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748013‑3748210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |