Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_007779 274,733 Δ97,240 bp 100% [mmuP][mhpD] 90 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 274733 371972 97240 262 [0] [0] 260 [mmuP]–[mhpD] 90 genes
[mmuP], mmuM, afuC, afuB, insB, insA, ykgN, yagB, yagA, yagE, yagF, yagG, yagH, yagI, argF, insB, insA, yagJ, yagK, yagL, yagM, yagN, intF, yagP, yagQ, yagR, yagS, yagT, yagU, ykgJ, yagV, yagW, yagX, yagY, yagZ, ykgK, ykgL, Y75_p4288, Y75_p4289, eaeH, insE, insF, ykgA, ykgB, ykgI, ykgC, ykgD, ykgE, ykgF, ykgG, ykgH, betA, betB, betI, betT, yahA, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, [mhpD]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 2747320 (0.000)198 (0.890) 114/160 NT 100% coding (184/1404 nt) mmuP S‑methylmethionine transporter
?NC_007779 371973 = 0 (0.000)coding (635/810 nt) mhpD 2‑keto‑4‑pentenoate hydratase

Only 100 of 262 total aligned reads displayed.

TGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGT  >  NC_007779/274632‑274832
                                                                                                    |                                                                                                    
tGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGG                                                                                                      >  1:11475799‑M1/1‑101 (MQ=255)
tGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGG                                                                                                      >  1:12131071‑M1/1‑101 (MQ=255)
 ggCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGc                                                                                                     >  1:5573193‑M1/1‑100 (MQ=255)
 ggCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGc                                                                                                     <  1:4228313‑M1/101‑2 (MQ=255)
   cacaGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcac                                                                                                   <  1:11186895‑M1/101‑4 (MQ=255)
   cacaGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcac                                                                                                   >  1:1033080‑M1/1‑98 (MQ=255)
    acaGGATTATTCTTCAATACCGGGTACATCATTTCCGCCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacg                                                                                                  <  1:1179943‑M1/101‑5 (MQ=255)
    acaGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacg                                                                                                  >  1:6785317‑M1/1‑97 (MQ=255)
     caGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTGTGGCTGGcacga                                                                                                 >  1:9125282‑M1/1‑96 (MQ=255)
     caGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGCTGGGGGGctggctgggacgc                                                                                                 >  1:4577443/1‑96 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgca                                                                                                >  1:1064331‑M1/1‑95 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgca                                                                                                >  1:10941232‑M1/1‑95 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgca                                                                                                >  1:9545743‑M1/1‑95 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgca                                                                                                <  1:10072302‑M1/101‑7 (MQ=255)
        gATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGGACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaa                                                                                              >  1:2042477‑M1/1‑93 (MQ=255)
        gATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGCTGGTGGTCTGGCTGGcacgcaaa                                                                                              >  1:3084169‑M1/1‑93 (MQ=255)
         attattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaa                                                                                             <  1:3345180‑M1/101‑10 (MQ=255)
           tattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatg                                                                                           <  1:2538309‑M1/101‑12 (MQ=255)
            attCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatgg                                                                                          <  1:8205060‑M1/101‑13 (MQ=255)
            attCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatgg                                                                                          >  1:6992539‑M1/1‑89 (MQ=255)
             ttcttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcccgcaaaatggc                                                                                         >  1:3985114‑M1/1‑88 (MQ=255)
               cttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggcca                                                                                       <  1:5141151‑M1/101‑16 (MQ=255)
                ttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaaaggccag                                                                                      >  1:5661551‑M1/1‑85 (MQ=255)
                 tcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagt                                                                                     <  1:5280939‑M1/101‑18 (MQ=255)
                  cAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtc                                                                                    <  1:8046867‑M1/101‑19 (MQ=255)
                   aaTACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtct                                                                                   <  1:4712975‑M1/101‑20 (MQ=255)
                    aTACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctg                                                                                  <  1:9050835‑M1/101‑21 (MQ=255)
                    aTACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctg                                                                                  <  1:8540066‑M1/101‑21 (MQ=255)
                    aTACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAAAGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctg                                                                                  >  1:7920477‑M1/1‑81 (MQ=255)
                      aCCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctggg                                                                                >  1:11687141‑M1/1‑79 (MQ=255)
                       ccGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaaaggccagtctgggg                                                                               >  1:1767183‑M1/1‑78 (MQ=255)
                        cGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtg                                                                              >  1:11408604‑M1/1‑77 (MQ=255)
                         gggTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtga                                                                             <  1:11542907‑M1/101‑26 (MQ=255)
                            tACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaacc                                                                          <  1:12598152‑M1/101‑29 (MQ=255)
                              catcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgc                                                                        >  1:12377758‑M1/1‑71 (MQ=255)
                               atcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgct                                                                       <  1:3536011‑M1/101‑32 (MQ=255)
                                tcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctg                                                                      <  1:6514413‑M1/101‑33 (MQ=255)
                                tcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctg                                                                      >  1:9867118‑M1/1‑69 (MQ=255)
                                 catTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgc                                                                     <  1:4540301‑M1/101‑34 (MQ=255)
                                  atTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcg                                                                    <  1:10528760‑M1/101‑35 (MQ=255)
                                   tttCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgc                                                                   >  1:11907550‑M1/1‑66 (MQ=255)
                                    ttCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgca                                                                  <  1:4986599‑M1/101‑37 (MQ=255)
                                    ttCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgca                                                                  >  1:10975006‑M1/1‑65 (MQ=255)
                                     tCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcac                                                                 <  1:11302913‑M1/101‑38 (MQ=255)
                                      ccaccaCTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcacc                                                                >  1:10191546‑M1/1‑63 (MQ=255)
                                        accacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccgg                                                              >  1:1788109‑M1/1‑61 (MQ=255)
                                        accacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCCGGGGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcacccg                                                              >  1:277922‑M1/1‑61 (MQ=255)
                                          cacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaaaggccagtctgggtgaaccgctgcgcaccggag                                                            >  1:4439314‑M1/1‑59 (MQ=255)
                                          cacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGGCTGGCTGGcacgcaaaaaggccagtctgggtgaaccgctgcgcaccggag                                                            >  1:2478822‑M1/1‑59 (MQ=255)
                                           acTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGGCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccgggga                                                           >  1:11056973‑M1/1‑58 (MQ=255)
                                             tGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctggggggaccgctgcgcaccggagata                                                         >  1:52102‑M1/1‑56 (MQ=255)
                                               gAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatc                                                       >  1:2993976‑M1/1‑54 (MQ=255)
                                                aGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatca                                                      <  1:7810969‑M1/101‑49 (MQ=255)
                                                aGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGGCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccggagatatca                                                      >  1:12187373‑M1/1‑53 (MQ=255)
                                                 gcggcgGGAACGCTGCTGGGCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcat                                                     <  1:5610018‑M1/101‑50 (MQ=255)
                                                   ggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattc                                                   >  1:10856488‑M1/1‑50 (MQ=255)
                                                   ggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattc                                                   >  1:6063946‑M1/1‑50 (MQ=255)
                                                    gcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattct                                                  >  1:7456275‑M1/1‑49 (MQ=255)
                                                    gcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattct                                                  >  1:8382322‑M1/1‑49 (MQ=255)
                                                     cggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctt                                                 <  1:12716667‑M1/101‑54 (MQ=255)
                                                      gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctta                                                >  1:7631696‑M1/1‑47 (MQ=255)
                                                      gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctta                                                >  1:3268544‑M1/1‑47 (MQ=255)
                                                          aCGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgg                                            <  1:8772928‑M1/101‑59 (MQ=255)
                                                            gctgctGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgggg                                          <  1:7265667‑M1/101‑61 (MQ=255)
                                                            gctgctGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgggg                                          <  1:6309490‑M1/101‑61 (MQ=255)
                                                             ctgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggc                                         >  1:3670770‑M1/1‑40 (MQ=255)
                                                             ctgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggc                                         >  1:7377213‑M1/1‑40 (MQ=255)
                                                                ctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatt                                      >  1:6484425‑M1/1‑37 (MQ=255)
                                                                 tgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatta                                     <  1:3175747‑M1/101‑66 (MQ=255)
                                                                  ggCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattag                                    >  1:12329858‑M1/1‑35 (MQ=255)
                                                                  ggCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattag                                    <  1:1440274‑M1/101‑67 (MQ=255)
                                                                     cTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctacgcaccggagatatcattcttaccggggcattaggtc                                 >  1:4300475‑M1/1‑32 (MQ=255)
                                                                      tATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtcc                                >  1:7167218‑M1/1‑31 (MQ=255)
                                                                       aTCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccg                               <  1:2205552‑M1/101‑72 (MQ=255)
                                                                            aTTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggt                          <  1:6214593‑M1/101‑77 (MQ=255)
                                                                             ttGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtg                         <  1:4804118‑M1/101‑78 (MQ=255)
                                                                               ggTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggc                       >  1:1581207‑M1/1‑22 (MQ=255)
                                                                               ggTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggc                       <  1:1405239‑M1/101‑80 (MQ=255)
                                                                               ggTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggc                       <  1:1201752‑M1/101‑80 (MQ=255)
                                                                               ggTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccagagatatcattcttaccggggcattaggtccgatggtggc                       >  1:2584999‑M1/1‑22 (MQ=255)
                                                                                gTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcg                      <  1:1000953‑M1/101‑81 (MQ=255)
                                                                                gTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcg                      >  1:10447186‑M1/1‑21 (MQ=255)
                                                                                gTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcg                      <  1:1929737‑M1/101‑81 (MQ=255)
                                                                                    gcTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtga                  <  1:8017210‑M1/101‑85 (MQ=255)
                                                                                      tggtggTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat                <  1:5887663‑M1/101‑87 (MQ=255)
                                                                                      tggtggTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat                <  1:2462693‑M1/101‑87 (MQ=255)
                                                                                       ggtggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatg               <  1:668896‑M1/101‑88 (MQ=255)
                                                                                        gtggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgc              <  1:9719474‑M1/101‑89 (MQ=255)
                                                                                        gtggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgc              <  1:3526233‑M1/101‑89 (MQ=255)
                                                                                           gtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcggg           <  1:4170115‑M1/101‑92 (MQ=255)
                                                                                           gtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcggg           >  1:9399456‑M1/1‑10 (MQ=255)
                                                                                            tCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggc          <  1:10543418‑M1/101‑93 (MQ=255)
                                                                                            tCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggc          <  1:8652741‑M1/101‑93 (MQ=255)
                                                                                            tCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggc          <  1:9687617‑M1/101‑93 (MQ=255)
                                                                                             ctggctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcg         <  1:2934131‑M1/101‑94 (MQ=255)
                                                                                              tggctggcacgcaaaatggccagtctgtgtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcga        <  1:6661498‑M1/101‑95 (MQ=255)
                                                                                               ggctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgat       <  1:6393868‑M1/101‑96 (MQ=255)
                                                                                                  tggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgt    >  1:6951351‑M1/1‑3 (MQ=255)
                                                                                                   ggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgtt   <  1:9005628‑M1/101‑100 (MQ=255)
                                                                                                    gcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgggccattaggtccgatggtggcggtgaatgcgggcgatcgttt  >  1:1017859‑M1/1‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGT  >  NC_007779/274632‑274832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.