| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 259 (1.080) | 136/172 | NT | 100% | intergenic (‑508/‑69) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | 3748110 = | 0 (0.000) | intergenic (+151/+961) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 302 total aligned reads displayed.
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748010‑3748210 | aaacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:1305562‑M2/101‑101 (MQ=255)aaacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:2282750‑M2/101‑101 (MQ=255)aaacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:8107486‑M2/101‑101 (MQ=255) cgcccgccgtgggagttatcaatcttaaacgggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:5382830‑M2/98‑101 (MQ=255) cgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:2449969‑M2/98‑101 (MQ=255) aatgCATTTACGAGGGAATAACTCGGCTCAGACATGCAGGATTGTAATGACTGTGTCTGCCGAGAAGAATTTCCCCGCTTATTTGAACCTTCATTAGTGaa > 1:8404938/4‑101 (MQ=2) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca < 1:5260915‑M2/6‑1 (MQ=255) ccgccgtgggagttatcaatcttaaacagggccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac > 1:1972135‑M2/95‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:2963042‑M2/9‑1 (MQ=255) cgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc > 1:3102687‑M2/91‑101 (MQ=255) cgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc > 1:8948914‑M2/91‑101 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca > 1:1729551‑M2/90‑101 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag < 1:11217346‑M2/13‑1 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag < 1:403084‑M2/13‑1 (MQ=255) gggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:8457797‑M2/88‑101 (MQ=255) gggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:5137356‑M2/88‑101 (MQ=255) ggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGc > 1:10224852‑M2/87‑101 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa > 1:7752886‑M2/86‑101 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 1:9355392‑M2/16‑1 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 1:12495044‑M2/16‑1 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 1:4319167‑M2/16‑1 (MQ=255) agttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa > 1:12061954‑M2/85‑101 (MQ=255) ttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa < 1:8617024‑M2/19‑1 (MQ=255) ttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa < 1:9679167‑M2/19‑1 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:4912613‑M2/82‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:221002‑M2/82‑101 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:3684906‑M2/80‑101 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:6535601‑M2/23‑1 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:6574486‑M2/23‑1 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGAt < 1:1945508‑M2/25‑1 (MQ=255) tcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa < 1:6418514‑M2/26‑1 (MQ=255) tcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa > 1:3646676‑M2/76‑101 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATaa < 1:8842300‑M2/27‑1 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATaa < 1:2775588‑M2/27‑1 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg < 1:10161612‑M2/29‑1 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:9478879‑M2/31‑1 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc > 1:4684564‑M2/71‑101 (MQ=255) acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg > 1:12461145‑M2/70‑101 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGt < 1:2391385‑M2/33‑1 (MQ=255) aggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 1:7361344‑M2/34‑1 (MQ=255) ggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:3002591‑M2/67‑101 (MQ=255) ggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc < 1:1503722‑M2/35‑1 (MQ=255) ggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:7879709‑M2/67‑101 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:6997146‑M2/38‑1 (MQ=255) ccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg > 1:3758372‑M2/61‑101 (MQ=255) ccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg > 1:8774244‑M2/61‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt < 1:4603167‑M2/43‑1 (MQ=255) gataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTg < 1:11497029‑M2/44‑1 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg > 1:6157657‑M2/55‑101 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg > 1:2846526‑M2/55‑101 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg < 1:9026210‑M2/47‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa < 1:1329344‑M2/48‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa > 1:10722754‑M2/54‑101 (MQ=255) tcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAg < 1:12338662‑M2/49‑1 (MQ=255) cgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAgg > 1:6301454‑M2/52‑101 (MQ=255) gaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGa > 1:4811030‑M2/51‑101 (MQ=255) gaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGa > 1:3178224‑M2/51‑101 (MQ=255) gaacaaccccagcgcgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGCTAATGCCGTGCTGTTTGGTGCCGAGGa < 1:6009614‑M2/51‑1 (MQ=255) aacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGaa > 1:7846758‑M2/50‑101 (MQ=255) aacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGaa < 1:4181669‑M2/52‑1 (MQ=255) aacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGaa < 1:7134361‑M2/52‑1 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc > 1:9633266‑M2/49‑101 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg > 1:7631937‑M2/48‑101 (MQ=255) aaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGa < 1:11850176‑M2/55‑1 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt > 1:3606283‑M2/44‑101 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa < 1:10270588‑M2/60‑1 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa < 1:2709356‑M2/60‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc < 1:11279633‑M2/65‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc < 1:4573054‑M2/65‑1 (MQ=255) gacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCg > 1:4852257‑M2/36‑101 (MQ=255) accaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAt > 1:11129018‑M2/33‑101 (MQ=255) accaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAt > 1:6601904‑M2/33‑101 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc > 1:4260694‑M2/32‑101 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:10432204‑M2/71‑1 (MQ=255) agaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACg < 1:1053636‑M2/74‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:3963343‑M2/76‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:7086614‑M2/76‑1 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:3352270‑M2/76‑1 (MQ=255) acgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTg < 1:2017872‑M2/77‑1 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc > 1:1602786‑M2/23‑101 (MQ=255) aactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGTTGTTTGGTGCCGAGGAACGATTTCGCCAGCGAATCAACGTTgccg < 1:4213823‑M2/80‑1 (MQ=255) aactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccg < 1:9141881‑M2/80‑1 (MQ=255) ctggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgcc < 1:4450806‑M2/82‑1 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCt < 1:8169218‑M2/83‑1 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCt < 1:11112612‑M2/83‑1 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCt < 1:2640912‑M2/83‑1 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag < 1:798358‑M2/86‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagga > 1:9248290‑M2/14‑101 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGgaga < 1:984568‑M2/90‑1 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGgaga < 1:11719380‑M2/90‑1 (MQ=255) ctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATa < 1:12660196‑M2/92‑1 (MQ=255) ctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATa < 1:5699188‑M2/92‑1 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAAt > 1:7344414‑M2/8‑101 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAAt > 1:9794111‑M2/8‑101 (MQ=255) aggtagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGGTTTCCCCAGCGAATCAACGTTGCCGCCTGAGGAGATAATc < 1:5544738‑M2/95‑1 (MQ=255) tagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGcc < 1:794410‑M2/98‑1 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCt < 1:12150832‑M2/99‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCtt < 1:8025129‑M2/100‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa > 1:10863565/1‑101 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa > 1:5857615/1‑101 (MQ=255) | TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748010‑3748210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |