Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_007779 3,750,591 Δ1,199 bp 100% insH insH

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 3750591–3751789 3751789 1–1199 339 [1] [0] 331 insH insH

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 37505901 (0.000)288 (1.200) 137/172 NT 99.8% intergenic (‑104/‑69) tnaA/insH tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein
?NC_007779 3751790 = 0 (0.000)intergenic (+151/+116) insH/tnaC IS5 element protein/tryptophanase leader peptide

Only 100 of 331 total aligned reads displayed.

TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTGGTGATG  >  NC_007779/3751690‑3751889
                                                                                                    |                                                                                                   
taatccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaa                                                                                                     <  1:4706665‑M2/1‑1 (MQ=255)
taatccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaa                                                                                                     >  1:3687702‑M2/101‑101 (MQ=255)
taatccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaa                                                                                                     >  1:3271233‑M2/101‑101 (MQ=255)
 aatccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaaa                                                                                                    >  1:1581872‑M2/100‑101 (MQ=255)
 aatccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaaa                                                                                                    >  1:5692265‑M2/100‑101 (MQ=255)
  atccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAAc                                                                                                   >  1:6450756‑M2/99‑101 (MQ=255)
   tccttcatttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACa                                                                                                  >  1:6242450‑M2/98‑101 (MQ=255)
        catttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaa                                                                                             >  1:5069303‑M2/93‑101 (MQ=255)
        catttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaa                                                                                             >  1:2807036‑M2/93‑101 (MQ=255)
        catttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaa                                                                                             >  1:1730240‑M2/93‑101 (MQ=255)
        catttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaa                                                                                             <  1:9845860‑M2/9‑1 (MQ=255)
         atttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaa                                                                                            >  1:9681963‑M2/92‑101 (MQ=255)
          tttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaat                                                                                           <  1:3085000‑M2/11‑1 (MQ=255)
           ttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaata                                                                                          <  1:5181609‑M2/12‑1 (MQ=255)
           ttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaata                                                                                          <  1:11278410‑M2/12‑1 (MQ=255)
           ttattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaata                                                                                          >  1:7625711‑M2/90‑101 (MQ=255)
            tattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaataa                                                                                         >  1:1796905‑M2/89‑101 (MQ=255)
            tattttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaataa                                                                                         >  1:114439‑M2/89‑101 (MQ=255)
             attttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGtaaataaa                                                                                        <  1:12349768‑M2/14‑1 (MQ=255)
               tttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACg                                                                                      <  1:2751907‑M2/16‑1 (MQ=255)
               tttaattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACg                                                                                      >  1:10117003‑M2/86‑101 (MQ=255)
                 taattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgag                                                                                    >  1:3056737‑M2/84‑101 (MQ=255)
                  aattacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgaga                                                                                   >  1:1573137‑M2/83‑101 (MQ=255)
                   attacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgagag                                                                                  <  1:9343580‑M2/20‑1 (MQ=255)
                   attacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgagag                                                                                  >  1:4524591‑M2/82‑101 (MQ=255)
                    ttacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgagaga                                                                                 >  1:10582897‑M2/81‑101 (MQ=255)
                    ttacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACgagaga                                                                                 <  1:10861728‑M2/21‑1 (MQ=255)
                     tacagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGAt                                                                                >  1:9514409‑M2/80‑101 (MQ=255)
                      acagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATg                                                                               <  1:207885‑M2/23‑1 (MQ=255)
                       cagtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGa                                                                              >  1:7339701‑M2/78‑101 (MQ=255)
                        agtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGAc                                                                             >  1:8112719‑M2/77‑101 (MQ=255)
                         gtgatccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGAcc                                                                            >  1:3417952‑M2/76‑101 (MQ=255)
                            atccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCttt                                                                         >  1:9794827‑M2/73‑101 (MQ=255)
                             tccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTg                                                                        >  1:315394‑M2/72‑101 (MQ=255)
                             tccctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTg                                                                        <  1:12748965‑M2/30‑1 (MQ=255)
                             tccctgtgaatattacatctgctacaccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTg                                                                        >  1:3554991‑M2/72‑101 (MQ=255)
                               cctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCa                                                                      <  1:7120291‑M2/32‑1 (MQ=255)
                               cctgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCa                                                                      >  1:10438682‑M2/70‑101 (MQ=255)
                                 tgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaa                                                                    >  1:7997371‑M2/68‑101 (MQ=255)
                                 tgtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaa                                                                    >  1:9006033‑M2/68‑101 (MQ=255)
                                  gtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaaa                                                                   <  1:3802271‑M2/35‑1 (MQ=255)
                                  gtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaaa                                                                   <  1:12221073‑M2/35‑1 (MQ=255)
                                  gtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaaa                                                                   >  1:4255264‑M2/67‑101 (MQ=255)
                                  gtgaatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCaaaa                                                                   <  1:8439035‑M2/35‑1 (MQ=255)
                                     aatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGc                                                                <  1:8597514‑M2/38‑1 (MQ=255)
                                     aatattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGc                                                                <  1:4083754‑M2/38‑1 (MQ=255)
                                      atattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCa                                                               >  1:2958153‑M2/63‑101 (MQ=255)
                                      atattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCa                                                               <  1:7858884‑M2/39‑1 (MQ=255)
                                       tattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCaa                                                              <  1:5296084‑M2/40‑1 (MQ=255)
                                       tattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCaa                                                              <  1:4208172‑M2/40‑1 (MQ=255)
                                       tattacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCaa                                                              >  1:1932012‑M2/62‑101 (MQ=255)
                                        attacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCaaa                                                             <  1:12559982‑M2/41‑1 (MQ=255)
                                        attacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCaaa                                                             >  1:1555085‑M2/61‑101 (MQ=255)
                                          tacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAt                                                           <  1:11566446‑M2/43‑1 (MQ=255)
                                          tacatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAt                                                           >  1:8747275‑M2/59‑101 (MQ=255)
                                           acatctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAtt                                                          <  1:11026429‑M2/44‑1 (MQ=255)
                                             atctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTaa                                                        >  1:9226910‑M2/56‑101 (MQ=255)
                                             atctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTaa                                                        <  1:5759381‑M2/46‑1 (MQ=255)
                                              tctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAg                                                       >  1:5006967‑M2/55‑101 (MQ=255)
                                               ctgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGa                                                      >  1:11102867‑M2/54‑101 (MQ=255)
                                                tgctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGat                                                     >  1:10328472‑M2/53‑101 (MQ=255)
                                                 gctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGata                                                    <  1:3882765‑M2/50‑1 (MQ=255)
                                                  ctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGatat                                                   <  1:790287‑M2/51‑1 (MQ=255)
                                                  ctataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGatat                                                   <  1:9640997‑M2/51‑1 (MQ=255)
                                                    ataccgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAg                                                 <  1:126547‑M2/53‑1 (MQ=255)
                                                      accgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGca                                               <  1:6886077‑M2/55‑1 (MQ=255)
                                                      accgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGca                                               >  1:2488382‑M2/47‑101 (MQ=255)
                                                      accgattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATAACCTTTGCAAAAGGCAAAATTAAGATATAGca                                               <  1:3233512‑M2/55‑1 (MQ=255)
                                                         gattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGcaaac                                            >  1:5128142‑M2/44‑101 (MQ=255)
                                                         gattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGcaaac                                            <  1:1133367‑M2/58‑1 (MQ=255)
                                                         gattaattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGcaaac                                            >  1:10784384‑M2/44‑101 (MQ=255)
                                                            taattctccagatatatatgcaagcaccatcatttaaaaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGcaaacaaa                                         >  1:9922986‑M2/41‑101 (MQ=255)
                                                             aattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAAt                                        <  1:12124480‑M2/62‑1 (MQ=255)
                                                             aattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAAt                                        >  1:1861659‑M2/40‑101 (MQ=255)
                                                             aattcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAAt                                        <  1:2995946‑M2/62‑1 (MQ=255)
                                                              attcgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATa                                       <  1:2198157‑M2/63‑1 (MQ=255)
                                                                 cgccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGAt                                    >  1:4903615‑M2/36‑101 (MQ=255)
                                                                  gccagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATc                                   >  1:12002706‑M2/35‑101 (MQ=255)
                                                                    cagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATcac                                 >  1:7446937‑M2/33‑101 (MQ=255)
                                                                    cagatatatatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATcac                                 >  1:3476413‑M2/33‑101 (MQ=255)
                                                                           atatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAAt                          >  1:564461‑M2/26‑101 (MQ=255)
                                                                           atatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAAt                          <  1:1115406‑M2/76‑1 (MQ=255)
                                                                           atatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAAt                          >  1:8409226‑M2/26‑101 (MQ=255)
                                                                            tatgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATc                         >  1:10018264‑M2/25‑101 (MQ=255)
                                                                             atgcaagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCt                        <  1:6711192‑M2/78‑1 (MQ=255)
                                                                                caagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAAt                     >  1:2218465‑M2/21‑101 (MQ=255)
                                                                                caagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAAt                     >  1:10932214‑M2/21‑101 (MQ=255)
                                                                                 aagcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATc                    <  1:4302017‑M2/82‑1 (MQ=255)
                                                                                   gcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCgg                  >  1:8271112‑M2/18‑101 (MQ=255)
                                                                                   gcaccatcatttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCgg                  <  1:9122665‑M2/84‑1 (MQ=255)
                                                                                          catttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAGGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGct           <  1:1025032‑M2/91‑1 (MQ=255)
                                                                                          catttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGct           <  1:2591463‑M2/91‑1 (MQ=255)
                                                                                          catttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGct           <  1:4759709‑M2/91‑1 (MQ=255)
                                                                                           atttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGctc          >  1:11743201‑M2/10‑101 (MQ=255)
                                                                                           atttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGAAAACAAATAGATCACATTGAATCTAATCGGTTTGGctc          <  1:467469‑M2/92‑1 (MQ=255)
                                                                                            tttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGctct         <  1:609341‑M2/93‑1 (MQ=255)
                                                                                             ttactaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTg        <  1:2687307‑M2/94‑1 (MQ=255)
                                                                                                 taaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTGGGGa    >  1:11891310‑M2/4‑101 (MQ=255)
                                                                                                  aaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTGGTGAt   >  1:11206168‑M2/3‑101 (MQ=255)
                                                                                                  aaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTGGTGAt   <  1:6615503‑M2/99‑1 (MQ=255)
                                                                                                    |                                                                                                   
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACATTGAATCTAATCGGTTTGGCTCTGGTGATG  >  NC_007779/3751690‑3751889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.