Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_007779 274,733 Δ97,240 bp 100% [mmuP][mhpD] 90 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_007779 274733 371972 97240 397 [0] [1] 394 [mmuP]–[mhpD] 90 genes
[mmuP], mmuM, afuC, afuB, insB, insA, ykgN, yagB, yagA, yagE, yagF, yagG, yagH, yagI, argF, insB, insA, yagJ, yagK, yagL, yagM, yagN, intF, yagP, yagQ, yagR, yagS, yagT, yagU, ykgJ, yagV, yagW, yagX, yagY, yagZ, ykgK, ykgL, Y75_p4288, Y75_p4289, eaeH, insE, insF, ykgA, ykgB, ykgI, ykgC, ykgD, ykgE, ykgF, ykgG, ykgH, betA, betB, betI, betT, yahA, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, [mhpD]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 2747320 (0.000)305 (0.980) 133/160 NT 100% coding (184/1404 nt) mmuP S‑methylmethionine transporter
?NC_007779 371973 = 0 (0.000)coding (635/810 nt) mhpD 2‑keto‑4‑pentenoate hydratase

Only 100 of 397 total aligned reads displayed.

TGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACC  >  NC_007779/274632‑274830
                                                                                                    |                                                                                                  
tGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGG                                                                                                    >  1:6946395‑M1/1‑101 (MQ=255)
    acaGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacg                                                                                                >  1:17744680‑M1/1‑97 (MQ=255)
     caGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgc                                                                                               >  1:17145299‑M1/1‑96 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGGTTCTGGCCTATCTGATTGGTGAGCTGGGGGTccggctggaacgca                                                                                              >  1:17594404/1‑95 (MQ=255)
      aGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgca                                                                                              >  1:16665377‑M1/1‑95 (MQ=255)
          ttattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaat                                                                                          <  1:3224022‑M1/101‑11 (MQ=255)
           tattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGGGGGAACGCTGCTGGCCTATCGGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatg                                                                                         <  1:8402798‑M1/101‑12 (MQ=255)
           tattCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatg                                                                                         <  1:9787918‑M1/101‑12 (MQ=255)
            attCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatgg                                                                                        <  1:1571529‑M1/101‑13 (MQ=255)
            attCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatgg                                                                                        >  1:4172957‑M1/1‑89 (MQ=255)
             ttcttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggc                                                                                       >  1:15558215‑M1/1‑88 (MQ=255)
             ttcttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggc                                                                                       >  1:15824163‑M1/1‑88 (MQ=255)
             ttcttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggc                                                                                       <  1:8104626‑M1/101‑14 (MQ=255)
               cttcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggcca                                                                                     <  1:7359147‑M1/101‑16 (MQ=255)
                 tcAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagt                                                                                   <  1:7303327‑M1/101‑18 (MQ=255)
                    aTACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctg                                                                                <  1:8694812‑M1/101‑21 (MQ=255)
                     tACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgg                                                                               <  1:9612667‑M1/101‑22 (MQ=255)
                      aCCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctggg                                                                              <  1:16060720‑M1/101‑23 (MQ=255)
                      aCCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaatggccagtctggg                                                                              >  1:8502622‑M1/1‑79 (MQ=255)
                       ccGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggt                                                                             <  1:586351‑M1/101‑24 (MQ=255)
                       ccGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggt                                                                             <  1:6392278‑M1/101‑24 (MQ=255)
                       ccGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggt                                                                             <  1:10390344‑M1/101‑24 (MQ=255)
                        cGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtg                                                                            <  1:15115311‑M1/101‑25 (MQ=255)
                        cGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccaggctggggg                                                                            >  1:7990188‑M1/1‑77 (MQ=255)
                         gggTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtga                                                                           <  1:16758479‑M1/101‑26 (MQ=255)
                         gggTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtga                                                                           <  1:11800098‑M1/101‑26 (MQ=255)
                          ggTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtttgggtgaa                                                                          <  1:14383431‑M1/101‑27 (MQ=255)
                           gTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaac                                                                         <  1:3324193‑M1/101‑28 (MQ=255)
                            tACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaacc                                                                        <  1:7534348‑M1/101‑29 (MQ=255)
                              catcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgc                                                                      <  1:10177694‑M1/101‑31 (MQ=255)
                               atcatTTCCACCACTGGAGCGGCGGGAACGCTGCTGGACTATCTGATTGGTGCGCTGGTGGTCTGGGTGGcacgcaaaatggccagtctgggtgaaccgct                                                                     >  1:9139195‑M1/1‑70 (MQ=255)
                                  atTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcg                                                                  <  1:655162‑M1/101‑35 (MQ=255)
                                  atTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagcctgggggaaccgctgcg                                                                  >  1:10500736‑M1/1‑67 (MQ=255)
                                    ttCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGGGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgca                                                                >  1:16266498‑M1/1‑65 (MQ=255)
                                     tCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcac                                                               >  1:4894633‑M1/1‑64 (MQ=255)
                                       caccacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccg                                                             >  1:10139363‑M1/1‑62 (MQ=255)
                                        accacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccgg                                                            <  1:10939498‑M1/101‑41 (MQ=255)
                                         ccacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGGCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccgga                                                           >  1:2787400‑M1/1‑60 (MQ=255)
                                          cacTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaaaggccagtctgggggaaccgctgcgcaccggag                                                          >  1:11996868‑M1/1‑59 (MQ=255)
                                           acTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggaga                                                         <  1:2092211‑M1/101‑44 (MQ=255)
                                           acTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcggaccggaga                                                         >  1:14740766‑M1/1‑58 (MQ=255)
                                            cTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagat                                                        <  1:12668328‑M1/101‑45 (MQ=255)
                                            cTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagat                                                        >  1:10564249‑M1/1‑57 (MQ=255)
                                              ggAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGGGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccggagatat                                                      >  1:13229788‑M1/1‑55 (MQ=255)
                                               gAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaattgccagtctgggtgaaccgctgcgcaccggagatatc                                                     >  1:6835112‑M1/1‑54 (MQ=255)
                                                 gcggcgGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcat                                                   >  1:2227464‑M1/1‑52 (MQ=255)
                                                 gcggcgGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcat                                                   <  1:1517722‑M1/101‑50 (MQ=255)
                                                  cggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcatt                                                  <  1:9908419‑M1/101‑51 (MQ=255)
                                                  cggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcatt                                                  >  1:16553142‑M1/1‑51 (MQ=255)
                                                   ggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattc                                                 >  1:7250294‑M1/1‑50 (MQ=255)
                                                   ggcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattc                                                 >  1:11505873‑M1/1‑50 (MQ=255)
                                                    gcggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattct                                                <  1:3005774‑M1/101‑53 (MQ=255)
                                                     cggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctt                                               <  1:13912809‑M1/101‑54 (MQ=255)
                                                     cggGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctt                                               <  1:4694976‑M1/101‑54 (MQ=255)
                                                      gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctta                                              >  1:11652224‑M1/1‑47 (MQ=255)
                                                      gggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattctta                                              >  1:4331887‑M1/1‑47 (MQ=255)
                                                       ggAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttac                                             >  1:4624926‑M1/1‑46 (MQ=255)
                                                         aaCGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccg                                           <  1:12557769‑M1/101‑58 (MQ=255)
                                                         aaCGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccg                                           <  1:8870217‑M1/101‑58 (MQ=255)
                                                           cGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggg                                         >  1:2482981‑M1/1‑42 (MQ=255)
                                                            gctgctGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgggg                                        <  1:17338670‑M1/101‑61 (MQ=255)
                                                            gctgctGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccgggg                                        <  1:14124420‑M1/101‑61 (MQ=255)
                                                              tgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggca                                      >  1:4114388‑M1/1‑39 (MQ=255)
                                                              tgctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggca                                      >  1:14775490‑M1/1‑39 (MQ=255)
                                                                ctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatt                                    >  1:10148715‑M1/1‑37 (MQ=255)
                                                                ctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatt                                    >  1:3715160‑M1/1‑37 (MQ=255)
                                                                ctgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatt                                    <  1:2333580‑M1/101‑65 (MQ=255)
                                                                 tgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatta                                   >  1:15989029‑M1/1‑36 (MQ=255)
                                                                 tgGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcatta                                   <  1:10733851‑M1/101‑66 (MQ=255)
                                                                   gCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattagg                                 >  1:16986293‑M1/1‑34 (MQ=255)
                                                                   gCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattagg                                 <  1:16173829‑M1/101‑68 (MQ=255)
                                                                       aTCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccg                             >  1:1279345‑M1/1‑30 (MQ=255)
                                                                       aTCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccg                             <  1:14506112‑M1/101‑72 (MQ=255)
                                                                        tCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccga                            >  1:11093690‑M1/1‑29 (MQ=255)
                                                                        tCTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccga                            <  1:17230824‑M1/101‑73 (MQ=255)
                                                                         cTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgat                           >  1:13364220‑M1/1‑28 (MQ=255)
                                                                         cTGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgat                           <  1:7792676‑M1/101‑74 (MQ=255)
                                                                          tGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatg                          <  1:5080451‑M1/101‑75 (MQ=255)
                                                                          tGATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggggaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatg                          >  1:5317762‑M1/1‑27 (MQ=255)
                                                                           gATTGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatgg                         <  1:3613550‑M1/101‑76 (MQ=255)
                                                                             ttGGTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtg                       >  1:8274679‑M1/1‑24 (MQ=255)
                                                                                gTGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcg                    <  1:1941823‑M1/101‑81 (MQ=255)
                                                                                 tGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcgg                   >  1:15365562‑M1/1‑20 (MQ=255)
                                                                                 tGCGCTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcgg                   <  1:348701‑M1/101‑82 (MQ=255)
                                                                                     cTGGTGGTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaa               <  1:5988798‑M1/101‑86 (MQ=255)
                                                                                      tggtggTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat              >  1:5935669‑M1/1‑15 (MQ=255)
                                                                                      tggtggTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat              >  1:9321291‑M1/1‑15 (MQ=255)
                                                                                      tggtggTCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaat              <  1:3919602‑M1/101‑87 (MQ=255)
                                                                                       ggtggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatg             <  1:624080‑M1/101‑88 (MQ=255)
                                                                                         tggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcg           <  1:9688106‑M1/101‑90 (MQ=255)
                                                                                          ggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgg          <  1:7685275‑M1/101‑91 (MQ=255)
                                                                                          ggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgg          >  1:13478665‑M1/1‑11 (MQ=255)
                                                                                          ggtCTGGCTGGcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgg          >  1:17779473‑M1/1‑11 (MQ=255)
                                                                                               ggctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgat     <  1:14352555‑M1/101‑96 (MQ=255)
                                                                                                gctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatc    <  1:1246283‑M1/101‑97 (MQ=255)
                                                                                                gctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatc    <  1:5674312‑M1/101‑97 (MQ=255)
                                                                                                gctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatc    <  1:5435515‑M1/101‑97 (MQ=255)
                                                                                                 ctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcg   <  1:13015593‑M1/101‑98 (MQ=255)
                                                                                                 ctggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcg   >  1:6727909‑M1/1‑4 (MQ=255)
                                                                                                  tggcacgcaaaatggccagtctgggtgaaccgctgcgcaccggagatatcattcttaccggggcattaggtccgatggtggcggtgaatgcgggcgatcgt  >  1:12305401‑M1/1‑3 (MQ=255)
                                                                                                    |                                                                                                  
TGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACC  >  NC_007779/274632‑274830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.