New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	2320794 =	NA (NA)	240 (0.870)	121/180	NT	100%	intergenic (+633/+11)	rcsB/insD	DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/IS2 element protein
	?	NC_007779	= 2589834	0 (0.000)					intergenic (+470/‑69)	acrD/yffB	aminoglycoside/multidrug efflux system/hypothetical protein

CCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTGGATTT  >  NC_007779/2320700‑2320800                                                                                               |       cccgTTAATCCGATTATCATCCACGACCAAAAACATCATATCCGCATTATCGCCGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGtcgctct  <  1:5189459/98‑7 (MQ=255)                                                                                               |       CCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTGGATTT  >  NC_007779/2320700‑2320800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.