New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	3261134 =	NA (NA)	227 (0.820)	122/180	NT	100%	intergenic (‑60/‑68)	tdcE/insH	pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
	?	NC_007779	3265774 =	0 (0.000)					coding (110/990 nt)	tdcB	catabolic threonine dehydratase, PLP‑dependent

GGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGA  >  NC_007779/3261036‑3261136                                                                                                   |   ggCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTaagtt  <  1:13248425/101‑3 (MQ=255)                                                                                                   |   GGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGA  >  NC_007779/3261036‑3261136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.