New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2320794 =NA (NA)276 (1.010) 120/180 NT 100% intergenic (+633/+11) rcsB/insD DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/IS2 element protein
?NC_007779 = 2589834 0 (0.000)intergenic (+470/‑69) acrD/yffB aminoglycoside/multidrug efflux system/hypothetical protein

Only 100 of 294 total aligned reads displayed.

TCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2320877‑2320794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  NC_007779/2589834‑2589735
                                                                                                                                                                                        
TCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAA                                                                                     >  1:10950765/1‑101
  GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACA                                                                                   >  1:13546053/1‑101
  GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACA                                                                                   <  1:13090958/101‑1
    TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATT                                                                                 >  1:1263086/1‑101
     CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATATGGGCAAATCCAATTATCAGGAAATATAACATTA                                                                                <  1:2430406/101‑1
     CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTA                                                                                <  1:982611/101‑1
     CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTA                                                                                <  1:13389645/101‑1
       CCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATC                                                                              <  1:8523004/101‑1
        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCG                                                                             >  1:12754921/1‑101
        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCG                                                                             >  1:6948132/1‑101
        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAAAATAAAAATATCa                                                                             >  1:12396349/1‑100
        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGCGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCG                                                                             >  1:3692619/1‑101
        CACGGGAATATCTGCGGCAGCGGGCTCGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCG                                                                             >  1:8438585/1‑101
         ACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGA                                                                            <  1:6340564/101‑1
          CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAA                                                                           <  1:3089872/101‑1
           GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAG                                                                          <  1:7902110/101‑1
           GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAG                                                                          <  1:8250310/101‑1
             GAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTA                                                                        <  1:5268771/101‑1
              AATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTAT                                                                       >  1:12185941/1‑101
               ATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATT                                                                      <  1:7341409/101‑1
               ATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATT                                                                      <  1:6472698/101‑1
                TATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTC                                                                     >  1:5543300/1‑101
                  TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAA                                                                   <  1:7369213/101‑1
                  TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAA                                                                   <  1:10247958/101‑1
                   CTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAA                                                                  <  1:9146508/101‑1
                    TGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAAT                                                                 <  1:3628041/101‑1
                       GGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAA                                                              <  1:1581787/101‑1
                        GCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAAC                                                             <  1:2786125/101‑1
                         CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACA                                                            <  1:6163981/101‑1
                         CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACA                                                            <  1:1432098/101‑1
                         CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACA                                                            <  1:4987660/101‑1
                           GCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAAC                                                          <  1:13184263/101‑1
                           GCGGGCTTGTAATGGGTTAAGTGATAACAGATGTATGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAAC                                                          >  1:5988696/1‑101
                            CGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACT                                                         <  1:5838759/101‑1
                              GGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTAT                                                       <  1:4391171/101‑1
                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATT                                                      >  1:7572359/1‑101
                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGCAAATATAACATTATCGAAGAATTCAAATTAACAACTATT                                                      >  1:9649704/1‑101
                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTACCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATT                                                      <  1:10876110/101‑1
                                 TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAA                                                    <  1:4071069/101‑1
                                 TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAA                                                    >  1:6295398/1‑101
                                 TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAA                                                    >  1:9376603/1‑101
                                 TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAA                                                    >  1:13248278/1‑101
                                     AATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAA                                                <  1:9502028/101‑1
                                      ATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAAT                                               <  1:6799980/101‑1
                                      ATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAAT                                               >  1:10010048/1‑101
                                        GGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATAT                                             <  1:3337760/101‑1
                                         GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATT                                            >  1:12910236/1‑101
                                           TTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAA                                          <  1:8701476/101‑1
                                            TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAA                                         <  1:10050038/101‑1
                                            TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAA                                         <  1:3922057/101‑1
                                            TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAA                                         <  1:11530918/101‑1
                                            TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAA                                         <  1:6275257/101‑1
                                             AAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAAC                                        <  1:9463595/101‑1
                                               GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAAGAT                                      <  1:11642155/101‑1
                                               GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACAT                                      <  1:13931973/101‑1
                                               GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACAT                                      <  1:4607728/101‑1
                                                TGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATT                                     >  1:4758356/1‑101
                                                TGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATT                                     >  1:8018203/1‑101
                                                TGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATT                                     <  1:10466595/101‑1
                                                 GATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTT                                    >  1:1331266/1‑101
                                                    AACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTA                                 <  1:12967116/101‑1
                                                    AACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTA                                 <  1:8413350/101‑1
                                                      CAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAAC                               <  1:4143352/101‑1
                                                      CAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAAC                               <  1:10340847/101‑1
                                                       AGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACG                              >  1:10558254/1‑101
                                                       AGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACG                              <  1:7129518/101‑1
                                                         ATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTA                            >  1:12503425/1‑101
                                                          TGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAA                           <  1:9255660/101‑1
                                                           GTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAA                          <  1:11295491/101‑1
                                                            TCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAAC                         >  1:8942857/1‑101
                                                            TCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAAC                         >  1:7075006/1‑101
                                                             CTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACA                        <  1:6717440/101‑1
                                                              TGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACAT                       >  1:5012608/1‑101
                                                               GGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATT                      <  1:5296812/101‑1
                                                               GGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATT                      <  1:7847661/101‑1
                                                                   ATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGA                  >  1:12066573/1‑101
                                                                     ATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAAT                <  1:3421200/101‑1
                                                                     ATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAAT                >  1:2263364/1‑101
                                                                     ATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAAT                <  1:1982157/101‑1
                                                                      TAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATA               >  1:3903162/1‑101
                                                                       AGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATAT              <  1:5491824/101‑1
                                                                        GGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATT             <  1:4715136/101‑1
                                                                          GGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCA           <  1:3775398/101‑1
                                                                           GCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCAT          <  1:9752346/101‑1
                                                                            CAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATC         <  1:10312266/101‑1
                                                                            CAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATC         <  1:13687984/101‑1
                                                                            CAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATC         <  1:1769660/101‑1
                                                                             AAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCT        >  1:1065372/1‑101
                                                                             AAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCT        <  1:11112762/101‑1
                                                                              AATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTT       <  1:8325908/101‑1
                                                                              AATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTT       <  1:10720597/101‑1
                                                                              AATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTT       >  1:7690783/1‑101
                                                                              AATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTT       >  1:7300307/1‑101
                                                                               ATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTG      >  1:13752173/1‑101
                                                                               ATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTG      <  1:41905/101‑1
                                                                               ATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTG      <  1:7550203/101‑1
                                                                               ATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTG      >  1:11815166/1‑101
                                                                                TCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGT     >  1:2944270/1‑101
                                                                                   AATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  1:6030314/101‑1
                                                                                   AATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  1:6970272/101‑1
                                                                                                                                                                                        
TCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2320877‑2320794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  NC_007779/2589834‑2589735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.