| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3512759 | 3 (0.010) | 251 (0.930) | 121/178 | NT | 98.8% | coding (535/1026 nt) | cytR | DNA‑binding transcriptional dual regulator |
| ? | NC_007779 | = 3744262 | NA (NA) | intergenic (‑90/+31) | insC/yidZ | IS2 element protein/DNA‑binding transcriptional regulator | |||||
Only 100 of 681 total aligned reads displayed.
TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG > NC_007779/3512659‑3512859 | tCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATT > 1:11827744‑M1/1‑101 (MQ=255)gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattatt < 1:10883923‑M2/7‑1 (MQ=255) gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta < 1:12843643‑M2/9‑1 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata > 1:2107580‑M2/91‑101 (MQ=255) gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTatat < 1:11658806‑M2/12‑1 (MQ=255) ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATg < 1:10368832‑M2/13‑1 (MQ=255) gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg > 1:9173378‑M1/1‑95 (MQ=255) gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGa < 1:461661‑M2/14‑1 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAg < 1:13136809‑M2/15‑1 (MQ=255) cgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggc > 1:7886437‑M1/1‑93 (MQ=255) gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc > 1:8942891‑M1/1‑92 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg > 1:11076023‑M2/82‑101 (MQ=255) gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg < 1:8849013‑M2/20‑1 (MQ=255) tGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctg > 1:8549596‑M1/1‑87 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAggg > 1:13314682‑M2/81‑101 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa < 1:294634‑M2/26‑1 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa < 1:11575415‑M2/26‑1 (MQ=255) cgaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctc > 1:4965483‑M1/1‑81 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa > 1:11927159‑M2/75‑101 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa > 1:4201975‑M2/75‑101 (MQ=255) gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACg > 1:7059492‑M2/73‑101 (MQ=255) gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACg > 1:7786533‑M2/73‑101 (MQ=255) aacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcca < 1:1782841‑M1/101‑23 (MQ=255) tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg < 1:9093454‑M2/34‑1 (MQ=255) tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg < 1:9719986‑M2/34‑1 (MQ=255) gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGt < 1:10018177‑M2/39‑1 (MQ=255) cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat < 1:10789389‑M1/101‑33 (MQ=255) cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat < 1:13943242‑M1/101‑33 (MQ=255) cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGta > 1:13618936‑M2/62‑101 (MQ=255) ccGGAGCTGGAGCTGTCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatat < 1:8663508‑M1/101‑35 (MQ=255) ccGGAGCTGGAGCTGCCTACAGTTCATATCGACATTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatat > 1:3256836‑M1/1‑67 (MQ=255) cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatc < 1:6557849‑M1/101‑36 (MQ=255) ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca < 1:3112910‑M1/101‑37 (MQ=255) gagctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcac < 1:285942‑M1/101‑38 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGcc < 1:5535935‑M2/45‑1 (MQ=255) tggagctgCCTGCAGTTCATATCGACGATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa < 1:7129290‑M1/101‑42 (MQ=255) tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa > 1:12704506‑M1/1‑60 (MQ=255) tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa > 1:8237965‑M1/1‑60 (MQ=255) ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGt > 1:5716440‑M2/54‑101 (MQ=255) ggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaa < 1:11373913‑M1/101‑43 (MQ=255) gagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaat < 1:2761423‑M1/101‑44 (MQ=255) ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTccc > 1:2732037‑M2/51‑101 (MQ=255) ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTccc > 1:8028431‑M2/51‑101 (MQ=255) ctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataag < 1:7585271‑M1/101‑47 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt < 1:1967644‑M2/59‑1 (MQ=255) ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt < 1:8357508‑M2/59‑1 (MQ=255) aCAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag > 1:2478113‑M1/1‑49 (MQ=255) taagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGcc > 1:1059112‑M2/40‑101 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCg > 1:6264826‑M2/39‑101 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCg > 1:405620‑M2/39‑101 (MQ=255) tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtg > 1:3850954‑M2/36‑101 (MQ=255) tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtg > 1:10489102‑M2/36‑101 (MQ=255) tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 1:7644048‑M1/101‑61 (MQ=255) atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac < 1:9256186‑M1/101‑62 (MQ=255) atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac > 1:12224630‑M1/1‑40 (MQ=255) taacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTgtgt > 1:4266660‑M2/33‑101 (MQ=255) tCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact > 1:2365546‑M1/1‑39 (MQ=255) aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc < 1:1207479‑M2/70‑1 (MQ=255) aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc > 1:3640968‑M2/32‑101 (MQ=255) gACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 1:5958560‑M1/101‑65 (MQ=255) agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt > 1:2657814‑M2/29‑101 (MQ=255) agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt > 1:1023991‑M2/29‑101 (MQ=255) aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt > 1:1233728‑M1/1‑34 (MQ=255) aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt < 1:6787914‑M1/101‑68 (MQ=255) atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc < 1:2188759‑M2/75‑1 (MQ=255) aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 1:355461‑M1/101‑69 (MQ=255) aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt > 1:5430918‑M1/1‑33 (MQ=255) tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 1:13705821‑M1/1‑32 (MQ=255) tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt < 1:1483534‑M1/101‑70 (MQ=255) tctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGc < 1:6927395‑M2/78‑1 (MQ=255) tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt > 1:12404688‑M2/22‑101 (MQ=255) ccgccgCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact < 1:6189195‑M1/101‑75 (MQ=255) gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc < 1:7262518‑M2/82‑1 (MQ=255) gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc < 1:3736659‑M2/82‑1 (MQ=255) cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta < 1:13459462‑M1/101‑76 (MQ=255) cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta > 1:4733356‑M1/1‑26 (MQ=255) tataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg < 1:9314841‑M2/86‑1 (MQ=255) cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat > 1:4458162‑M1/1‑21 (MQ=255) cATTTGATGCAGTAAATTATTagactggccccctgaatctccagaaaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat > 1:6385934‑M1/1‑21 (MQ=255) tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg > 1:1125872‑M1/1‑19 (MQ=255) aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTa > 1:9370855‑M2/13‑101 (MQ=255) gcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt > 1:9578442‑M2/9‑101 (MQ=255) gcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt < 1:13049530‑M2/93‑1 (MQ=255) gcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt > 1:5218967‑M2/9‑101 (MQ=255) gcaaatccAATTATTTATATGAGCAAGCGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt < 1:5831865‑M2/93‑1 (MQ=255) caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTc > 1:7423116‑M2/8‑101 (MQ=255) aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa < 1:14029600‑M2/95‑1 (MQ=255) atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg < 1:11487971‑M2/97‑1 (MQ=255) tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc > 1:9929145‑M2/4‑101 (MQ=255) ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcg < 1:1575287‑M2/99‑1 (MQ=255) cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc > 1:3398276‑M2/2‑101 (MQ=255) cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc > 1:12957453‑M2/2‑101 (MQ=255) cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc < 1:6108302‑M2/100‑1 (MQ=255) AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt < 1:9749601‑M2/101‑1 (MQ=255) atttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGt < 1:9438366/101‑1 (MQ=255) ttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCg < 1:8121106/101‑1 (MQ=255) tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg < 1:9019843‑M1/101‑101 (MQ=255) tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg > 1:6026605‑M1/1‑1 (MQ=255) tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg > 1:1258137‑M1/1‑1 (MQ=255) tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg < 1:666142‑M1/101‑101 (MQ=255) | TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG > NC_007779/3512659‑3512859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |