| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 287 (1.100) | 136/172 | NT | 100% | intergenic (‑508/‑69) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | 3748110 = | 0 (0.000) | intergenic (+151/+961) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 342 total aligned reads displayed.
TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748010‑3748210 | aaacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga < 1:5101050‑M2/1‑1 (MQ=255)aaacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:7390303‑M2/101‑101 (MQ=255) aacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag < 1:6388301‑M2/2‑1 (MQ=255) gcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAac < 1:5550872‑M2/5‑1 (MQ=255) gcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAac > 1:10440292‑M2/97‑101 (MQ=255) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca > 1:8825510‑M2/96‑101 (MQ=255) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca > 1:8528529‑M2/96‑101 (MQ=255) ccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAacac < 1:13492218‑M2/7‑1 (MQ=255) cgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACAcc > 1:5750251‑M2/94‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca > 1:3886397‑M2/93‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:8069449‑M2/9‑1 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag < 1:9255233‑M2/10‑1 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag > 1:6695645‑M2/92‑101 (MQ=255) cgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccatcgtgacaccaaagaacgaactggcaaccgctaagttagAGAACACcagc > 1:7790734‑M2/91‑101 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca > 1:2860814‑M2/90‑101 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:5930656‑M2/89‑101 (MQ=255) aCGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACGGAGGCAGGCGAGAAGAATTTACCCGCTTATTCGCACCTTCCTTAGTGAacgttgcaaa > 1:3070938/1‑93 (MQ=11) gggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:11591673‑M2/88‑101 (MQ=255) gggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:4018834‑M2/88‑101 (MQ=255) gagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa > 1:9069558‑M2/86‑101 (MQ=255) agttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa > 1:6071518‑M2/85‑101 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaa < 1:8301849‑M2/18‑1 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaa > 1:3733230‑M2/84‑101 (MQ=255) ttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 1:10790589‑M2/83‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:7746645‑M2/82‑101 (MQ=255) atcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACt < 1:7161306‑M2/21‑1 (MQ=255) atcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACt < 1:4823644‑M2/21‑1 (MQ=255) atcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACt < 1:6253742‑M2/21‑1 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc < 1:6922882‑M2/22‑1 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:8136682‑M2/23‑1 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:9409068‑M2/23‑1 (MQ=255) caatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:9797499‑M2/23‑1 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGAt > 1:801563‑M2/77‑101 (MQ=255) atcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGAt > 1:10364052‑M2/77‑101 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt < 1:4775329‑M2/28‑1 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt < 1:4567950‑M2/28‑1 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt < 1:13094136‑M2/28‑1 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt > 1:1755335‑M2/74‑101 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:7188634‑M2/31‑1 (MQ=255) acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg > 1:3539935‑M2/70‑101 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGt < 1:12123700‑M2/33‑1 (MQ=255) aggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg > 1:4857409‑M2/68‑101 (MQ=255) aggtccgccacataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 1:9009164‑M2/34‑1 (MQ=255) tccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTg < 1:13544627‑M2/37‑1 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:14205‑M2/64‑101 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:4944705‑M2/38‑1 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt > 1:3264177‑M2/63‑101 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt < 1:6004802‑M2/39‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggtaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt < 1:2063361‑M2/40‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt > 1:10078094‑M2/62‑101 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTgg > 1:11102136‑M2/60‑101 (MQ=255) tgataatcgaacaaccccagcgtcacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCACGCAAAACTCGATAATGCAGTGCTGTTTGGt > 1:11343111‑M2/59‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:426081‑M2/59‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:10110711‑M2/59‑101 (MQ=255) gataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACAAGCAGGCAAAACTCGATAATGCGGTGCTGTTCGGTg > 1:1891358‑M2/58‑101 (MQ=255) ataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGc > 1:317928‑M2/57‑101 (MQ=255) taatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGcc < 1:7125562‑M2/46‑1 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg < 1:7484728‑M2/47‑1 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg < 1:5118920‑M2/47‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa < 1:5324626‑M2/48‑1 (MQ=255) cgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAgg < 1:2014851‑M2/50‑1 (MQ=255) gaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGa > 1:2012082‑M2/51‑101 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg > 1:4217208‑M2/48‑101 (MQ=255) aaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGa > 1:12079306‑M2/47‑101 (MQ=255) ccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAtt > 1:6461961‑M2/45‑101 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt < 1:12281715‑M2/58‑1 (MQ=255) cccagcgtgacaccaaagaacgaacgggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt < 1:11942908‑M2/58‑1 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa > 1:6601582‑M2/42‑101 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc < 1:13689972‑M2/61‑1 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc < 1:1276090‑M2/62‑1 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa < 1:6345396‑M2/63‑1 (MQ=255) gtgacaacaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCAGTTTGGTGCCGAGGAACGATTTCACCAg > 1:1592908‑M2/38‑101 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc > 1:1040208‑M2/37‑101 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc > 1:10910104‑M2/37‑101 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc < 1:8658021‑M2/65‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc > 1:12863168‑M2/37‑101 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc > 1:2621847‑M2/37‑101 (MQ=255) gacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCg > 1:12210802‑M2/36‑101 (MQ=255) caccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGaa > 1:6773812‑M2/34‑101 (MQ=255) ccaaagaatgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc > 1:2396217‑M2/32‑101 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:3464612‑M2/71‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc < 1:5843032‑M2/73‑1 (MQ=255) gaacgaactggcaacagctaagttagAGAACATCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGt > 1:6213520‑M2/27‑101 (MQ=255) aacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGtt < 1:10490329‑M2/76‑1 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc > 1:502246‑M2/23‑101 (MQ=255) aactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccg > 1:8251737‑M2/22‑101 (MQ=255) actggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgc > 1:9641142‑M2/21‑101 (MQ=255) ctggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgccgcc > 1:10238714‑M2/20‑101 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTg > 1:8465230‑M2/18‑101 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag < 1:11009969‑M2/86‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagg < 1:10041061‑M2/87‑1 (MQ=255) cagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgaggag < 1:8894170‑M2/89‑1 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGgaga > 1:9488964‑M2/12‑101 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAAt > 1:5368059‑M2/8‑101 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATc > 1:8685898‑M2/7‑101 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATc < 1:2291675‑M2/95‑1 (MQ=255) aagtagAGAACACCAGCAGGCAAAACTCGATAATGCCGTTCTTTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATc < 1:12498137‑M2/95‑1 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGc > 1:4491358‑M2/5‑101 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCt < 1:13289660‑M2/99‑1 (MQ=255) gAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCtt > 1:8374291‑M2/2‑101 (MQ=255) | TTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748010‑3748210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |