| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,669,599 | Δ1 bp | 100% | coding (680/1221 nt) | dgsA ← | DNA‑binding transcriptional repressor |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,669,599 | 0 | C→. | 100.0% | 10.8 | 269 | coding (680/1221 nt) | dgsA | DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): new base (114/151): ref base (3/0): total (118/151) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.20e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.03e-01 | ||||||||||
Only 100 of 302 total aligned reads displayed.
CCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATAT > NC_007779/1669499‑1669695 | cccGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgc > 1:14902504/1‑101 (MQ=255) cGCAATAACAGCGTTTCCCATACGGGTCGCCCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccc > 1:14969851/1‑101 (MQ=255) cGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccg < 1:9806989/101‑2 (MQ=255) gCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgc < 1:3754766/101‑3 (MQ=255) gCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgc < 1:11904964/101‑3 (MQ=255) aaTAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAcgccgccc > 1:9550017/1‑97 (MQ=255) aTAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGcccc < 1:5635673/101‑1 (MQ=255) tAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGccccc < 1:5521014/101‑1 (MQ=255) aaCAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCa < 1:14569910/101‑1 (MQ=255) aaCAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCa < 1:2874083/101‑1 (MQ=255) aCAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCAc < 1:10727504/101‑1 (MQ=255) cAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACg > 1:30533/1‑101 (MQ=255) aGCGTTTCCCATACGGGTCGACCTGTGTGTGTCCTAGTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGt < 1:8825841/101‑1 (MQ=255) gCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGtt < 1:3398171/101‑1 (MQ=255) gCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGtt < 1:5141167/101‑1 (MQ=255) cGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtg > 1:10611215/1‑101 (MQ=255) gTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtgt < 1:11390585/101‑1 (MQ=255) gTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTtgt < 1:850424/101‑1 (MQ=255) cccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATc < 1:14094028/101‑1 (MQ=255) ccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCg < 1:2987754/101‑1 (MQ=255) ccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCg < 1:10906165/101‑1 (MQ=255) ccATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCg > 1:1854488/1‑101 (MQ=255) cATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGa < 1:15352113/101‑1 (MQ=255) cGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAac > 1:6214241/1‑101 (MQ=255) cGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAac < 1:6754216/101‑1 (MQ=255) tCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAaccacc > 1:3102465/1‑101 (MQ=255) gACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTg > 1:725077/1‑101 (MQ=255) gACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCCGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTg > 1:2372991/1‑101 (MQ=255) cTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGAACATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAAt < 1:13052724/101‑1 (MQ=255) gggtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATca < 1:5289790/99‑1 (MQ=255) tgtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATcac > 1:12503010/1‑101 (MQ=255) gtgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATcaca > 1:2759825/1‑101 (MQ=255) tgtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACAt > 1:9856092/1‑101 (MQ=255) gtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCTCCTGAATCACATc < 1:4493059/101‑1 (MQ=255) gtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATc < 1:11868428/101‑1 (MQ=255) gtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATc > 1:12917768/1‑101 (MQ=255) gtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATc < 1:15271856/101‑1 (MQ=255) gtgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATc > 1:13782263/1‑101 (MQ=255) tgGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcg < 1:11291477/101‑1 (MQ=255) tgCCTATTTCCCCGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc < 1:4361256/100‑1 (MQ=255) ggCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc > 1:5823139/1‑101 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc‑g < 1:6382793/101‑1 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc‑g > 1:5447561/1‑101 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc‑g > 1:4633137/1‑101 (MQ=255) ccTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc‑gc < 1:14702741/101‑1 (MQ=255) ccTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATcgc‑gc < 1:806999/101‑1 (MQ=255) tATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCgc‑gcgc < 1:1162605/101‑1 (MQ=255) ttCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGcccc < 1:3977690/101‑1 (MQ=255) ttCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGcccc > 1:666817/1‑101 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCC‑CCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCcg > 1:14140589/1‑101 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCcg > 1:900665/1‑101 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCcg < 1:7125169/101‑1 (MQ=255) tCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCcg > 1:12878429/1‑101 (MQ=255) cACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCAGGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCcgcg < 1:9092152/101‑1 (MQ=255) agaCTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAg < 1:8206498/101‑1 (MQ=255) ctactGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCa > 1:7673720/1‑101 (MQ=255) tactGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCAc > 1:2558976/1‑101 (MQ=255) tactGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGAC‑ACCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCAc > 1:3861307/1‑101 (MQ=255) actGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCTCGCGTGAGGCAcc < 1:12964928/101‑1 (MQ=255) ctgctgCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCGCACCCCACGTTGTATTCGA‑AAACACCTTGATCAAAACCCGGCGCCCCCCGTGA‑GCACCa > 1:11216852/1‑101 (MQ=255) ctgctgCCTGCGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCa < 1:4713106/101‑1 (MQ=255) tgcctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACa < 1:12773943/101‑1 (MQ=255) tgcctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGACACCAAACa > 1:10212199/1‑101 (MQ=255) cctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAg < 1:897422/101‑1 (MQ=255) cctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAg < 1:10024096/101‑1 (MQ=255) cctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAg > 1:11452800/1‑101 (MQ=255) ctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAgg > 1:8138112/1‑101 (MQ=255) ctgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAgg < 1:5763597/101‑1 (MQ=255) tgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGc < 1:2127422/101‑1 (MQ=255) tgcGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGc > 1:5267431/1‑101 (MQ=255) cGTGTAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCct > 1:13209875/1‑101 (MQ=255) gtgtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCctc > 1:9749215/1‑101 (MQ=255) gtgtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCctc > 1:1753275/1‑101 (MQ=255) tgtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCctct < 1:13593135/101‑1 (MQ=255) gtAGCAGATGACCGTCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTg < 1:10120021/101‑1 (MQ=255) gtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTg > 1:6054042/1‑101 (MQ=255) gtAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTg > 1:12080759/1‑101 (MQ=255) tAGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGc > 1:223550/1‑101 (MQ=255) aGCAGATGACCATCGGTAATGACGCCC‑CCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGcc > 1:3601037/1‑101 (MQ=255) aGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGcc < 1:4125342/101‑1 (MQ=255) aGCAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGcc > 1:7007844/1‑101 (MQ=255) cAGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCAt > 1:7378656/1‑101 (MQ=255) aGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCTC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATc < 1:926516/101‑1 (MQ=255) aGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATc > 1:11047197/1‑101 (MQ=255) aGATGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATc < 1:4826787/101‑1 (MQ=255) aTGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACTAAACAAGGCCTCTGCCATCGt > 1:2489407/1‑101 (MQ=255) aTGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCgc > 1:6564860/1‑100 (MQ=255) aTGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGt < 1:14488833/101‑1 (MQ=255) aTGACCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGt > 1:9432217/1‑101 (MQ=255) aCCATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCa < 1:7844173/101‑1 (MQ=255) ccATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCAt < 1:12377464/101‑1 (MQ=255) ccATCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCAt < 1:6807546/101‑1 (MQ=255) aTCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgc < 1:13455873/101‑1 (MQ=255) aTCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgc > 1:11535997/1‑101 (MQ=255) aTCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgc < 1:1436611/101‑1 (MQ=255) tCGGTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATgcg > 1:8647194/1‑101 (MQ=255) gTAATGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTg < 1:8002097/101‑1 (MQ=255) aaTGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGat < 1:5205358/101‑1 (MQ=255) tGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGatat < 1:10353003/101‑1 (MQ=255) tGACG‑CCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCAACGTCCATGCGCTGatat < 1:3333465/101‑1 (MQ=255) | CCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCGC‑GCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATAT > NC_007779/1669499‑1669695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |