New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 32611330 (0.000)319 (1.130) 139/168 NT 100% intergenic (‑59/‑69) tdcE/insH pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
?NC_007779 = 3748109 NA (NA)intergenic (+150/+962) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 354 total aligned reads displayed.

GTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA  >  NC_007779/3261033‑3261229
                                                                                                    |                                                                                                
gTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTaa                                                                                                  <  1:8727126/101‑1 (MQ=255)
gTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTaa                                                                                                  <  1:6262032/101‑1 (MQ=255)
   ggCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActt                                                                                               <  1:7979403‑M1/101‑4 (MQ=255)
    gCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActtt                                                                                              >  1:3061690‑M1/1‑97 (MQ=255)
     cGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttg                                                                                             <  1:6691685‑M1/101‑6 (MQ=255)
       tACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcc                                                                                           >  1:5329078‑M1/1‑94 (MQ=255)
         cAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgccta                                                                                         >  1:6941463‑M1/1‑92 (MQ=255)
          aGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaa                                                                                        <  1:8986347‑M1/101‑11 (MQ=255)
          aGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaa                                                                                        <  1:8292694‑M1/101‑11 (MQ=255)
             ttATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaagga                                                                                     >  1:3475974‑M1/1‑88 (MQ=255)
              tATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaa                                                                                    <  1:1344880‑M1/101‑15 (MQ=255)
              tATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaa                                                                                    >  1:8662356‑M1/1‑87 (MQ=255)
                    tGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcg                                                                              >  1:7638408‑M1/1‑81 (MQ=255)
                    tGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcg                                                                              >  1:7282007‑M1/1‑81 (MQ=255)
                        aTCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaata                                                                          <  1:13683274‑M1/101‑25 (MQ=255)
                        aTCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaata                                                                          >  1:1930454‑M1/1‑77 (MQ=255)
                           aaTATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagc                                                                       >  1:1478097‑M1/1‑74 (MQ=255)
                            atatCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTTActttgcctaaggaaggtgcgaataagcg                                                                      <  1:11645486‑M1/101‑29 (MQ=255)
                            atatCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcg                                                                      >  1:4868924‑M1/1‑73 (MQ=255)
                            atatCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcg                                                                      >  1:4645985‑M1/1‑73 (MQ=255)
                              atCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggg                                                                    >  1:6559565‑M1/1‑71 (MQ=255)
                              atCTACCTTCATGAAAAATAATCTCTCTACAATACGACAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggg                                                                    <  1:10088849‑M1/101‑31 (MQ=255)
                               tCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcgggg                                                                   >  1:11406042‑M1/1‑70 (MQ=255)
                                cTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcgggga                                                                  <  1:10413194‑M1/101‑33 (MQ=255)
                                  aCCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaa                                                                <  1:5152272‑M1/101‑35 (MQ=255)
                                   ccTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaat                                                               >  1:9807761‑M1/1‑66 (MQ=255)
                                     ttCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattc                                                             >  1:2868863‑M1/1‑64 (MQ=255)
                                       cATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattctt                                                           >  1:7017080‑M1/1‑62 (MQ=255)
                                       cATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattctt                                                           >  1:4193465‑M1/1‑62 (MQ=255)
                                        aTGAAAAATAATCTCACTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttc                                                          <  1:14252906‑M1/101‑41 (MQ=255)
                                         tGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttct                                                         >  1:3378325‑M1/1‑60 (MQ=255)
                                         tGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttct                                                         <  1:13919533‑M1/101‑42 (MQ=255)
                                         tGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttct                                                         >  1:6385460‑M1/1‑60 (MQ=255)
                                          gAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctc                                                        <  1:12976257‑M1/101‑43 (MQ=255)
                                           aaaaaTAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcg                                                       >  1:12915471‑M1/1‑58 (MQ=255)
                                           aaaaaTAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcg                                                       <  1:9344478‑M1/101‑44 (MQ=255)
                                            aaaaTAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcgg                                                      >  1:4000800‑M1/1‑57 (MQ=255)
                                              aataatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggct                                                    >  1:6196673‑M1/1‑55 (MQ=255)
                                              aataatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggct                                                    <  1:1337492‑M1/101‑47 (MQ=255)
                                               ataatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctg                                                   >  1:2327430‑M1/1‑54 (MQ=255)
                                                 aatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgac                                                 >  1:9187626‑M1/1‑52 (MQ=255)
                                                 aatCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgac                                                 >  1:326454‑M1/1‑52 (MQ=255)
                                                  atCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgact                                                <  1:1132569‑M1/101‑51 (MQ=255)
                                                   tctctcTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactc                                               <  1:10832470‑M1/101‑52 (MQ=255)
                                                    ctctctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactca                                              <  1:15006228‑M1/101‑53 (MQ=255)
                                                      ctctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                            >  1:14074621‑M1/1‑47 (MQ=255)
                                                       tctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                           >  1:8382355‑M1/1‑46 (MQ=255)
                                                       tctACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                           >  1:8864900‑M1/1‑46 (MQ=255)
                                                         tACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                         <  1:4332701‑M1/101‑58 (MQ=255)
                                                         tACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                         >  1:3851240‑M1/1‑44 (MQ=255)
                                                         tACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggcgcgaataagcggggaaattcttctcggctgactcagtcat                                         >  1:6861086‑M1/1‑44 (MQ=255)
                                                          aCAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                        <  1:12769074‑M1/101‑59 (MQ=255)
                                                           cAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                       >  1:9543553‑M1/1‑42 (MQ=255)
                                                            aaTACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                      >  1:15365212‑M1/1‑41 (MQ=255)
                                                               aCTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                   >  1:13803198‑M1/1‑38 (MQ=255)
                                                               aCTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                   >  1:12407282‑M1/1‑38 (MQ=255)
                                                                cTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt                                  >  1:5835172‑M1/1‑37 (MQ=255)
                                                                 ttCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                 >  1:7847661‑M1/1‑36 (MQ=255)
                                                                  tCAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                >  1:5906575‑M1/1‑35 (MQ=255)
                                                                   cAACTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                               <  1:9726529‑M1/101‑68 (MQ=255)
                                                                    aaCTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                              >  1:5625871‑M1/1‑33 (MQ=255)
                                                                    aaCTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                              >  1:3979759‑M1/1‑33 (MQ=255)
                                                                    aaCTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                              <  1:15408438‑M1/101‑69 (MQ=255)
                                                                     aCTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaatgtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                             <  1:13112029‑M1/101‑70 (MQ=255)
                                                                      cTAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                            <  1:5996992‑M1/101‑71 (MQ=255)
                                                                       tAAATTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                           <  1:2102349‑M1/101‑72 (MQ=255)
                                                                         aaTTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtt                         >  1:13899045‑M1/1‑28 (MQ=255)
                                                                          aTTATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                        <  1:11147224‑M1/101‑75 (MQ=255)
                                                                           ttATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                       >  1:1198919‑M1/1‑26 (MQ=255)
                                                                            tATGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga                      <  1:10933851‑M1/101‑77 (MQ=255)
                                                                             aTGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                     >  1:4710901‑M1/1‑24 (MQ=255)
                                                                             aTGCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                     <  1:12144426‑M1/101‑78 (MQ=255)
                                                                               gCAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                   <  1:7573131‑M1/101‑80 (MQ=255)
                                                                                cAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                  >  1:14197740‑M1/1‑21 (MQ=255)
                                                                                cAAATTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattccttcatgtttgagccg                  <  1:10292406‑M1/101‑81 (MQ=255)
                                                                                 aaaTTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                 >  1:13748352‑M1/1‑20 (MQ=255)
                                                                                 aaaTTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                 >  1:11062752‑M1/1‑20 (MQ=255)
                                                                                  aaTTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                <  1:2200433‑M1/101‑83 (MQ=255)
                                                                                  aaTTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                <  1:2536109‑M1/101‑83 (MQ=255)
                                                                                   aTTCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt               >  1:15104499‑M1/1‑18 (MQ=255)
                                                                                    ttCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt              >  1:14529005‑M1/1‑17 (MQ=255)
                                                                                    ttCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt              >  1:12291413‑M1/1‑17 (MQ=255)
                                                                                    ttCTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt              <  1:8524346‑M1/101‑85 (MQ=255)
                                                                                      cTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt            >  1:1403793‑M1/1‑15 (MQ=255)
                                                                                      cTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt            <  1:4559046‑M1/101‑87 (MQ=255)
                                                                                      cTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt            >  1:8059147‑M1/1‑15 (MQ=255)
                                                                                      cTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt            >  1:1766243‑M1/1‑15 (MQ=255)
                                                                                      cTGCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtatgagccgattttt            >  1:7399110‑M1/1‑15 (MQ=255)
                                                                                        gCGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc          <  1:15140337‑M1/101‑89 (MQ=255)
                                                                                         cGGGCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct         <  1:10665275‑M1/101‑90 (MQ=255)
                                                                                          gggCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc        <  1:5027876‑M1/101‑91 (MQ=255)
                                                                                          gggCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc        >  1:3552871‑M1/1‑11 (MQ=255)
                                                                                           ggCGCGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc       <  1:7141321‑M1/101‑92 (MQ=255)
                                                                                            gcgcGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc      <  1:11898078‑M1/101‑93 (MQ=255)
                                                                                            gcgcGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc      <  1:12596306‑M1/101‑93 (MQ=255)
                                                                                            gcgcGTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc      <  1:240949‑M1/101‑93 (MQ=255)
                                                                                             cgcgTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg     <  1:8584979‑M1/101‑94 (MQ=255)
                                                                                             cgcgTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg     >  1:10000381‑M1/1‑8 (MQ=255)
                                                                                               cgTTAActttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta   >  1:271267‑M1/1‑6 (MQ=255)
                                                                                                gTTAActttgcctaaggaaggtgcgaataagcggggaaattcttcgcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa  >  1:10583247‑M1/1‑5 (MQ=255)
                                                                                                    |                                                                                                
GTCGGCGTACAGCTTATCGCTGGTATCAATATCTACCTTCATGAAAAATAATCTCTCTACAATACTTCAACTAAATTATGCAAATTCTGCGGGCGCGTTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACA  >  NC_007779/3261033‑3261229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.