| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 291 (1.010) | 136/172 | NT | 100% | intergenic (‑508/‑69) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | 3748110 = | 0 (0.000) | intergenic (+151/+961) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 347 total aligned reads displayed.
GAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > NC_007779/3746810‑3747010 | gAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG < 1:7934092‑M1/101‑1 (MQ=255)gAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG > 1:13804932‑M1/1‑101 (MQ=255) aCGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGaga < 1:8404006‑M1/101‑4 (MQ=255) aCGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGaga < 1:10710173‑M1/101‑4 (MQ=255) cgcccgccGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaa > 1:10025499‑M1/1‑97 (MQ=255) gtcgtgGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacacca < 1:11068408‑M1/99‑10 (MQ=255) gccgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacacca > 1:4248048‑M1/1‑92 (MQ=255) gccgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacacca < 1:3496986‑M1/101‑10 (MQ=255) ccgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccag < 1:905760‑M1/101‑11 (MQ=255) cgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagc > 1:6696843‑M1/1‑90 (MQ=255) cgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagc > 1:13170092‑M1/1‑90 (MQ=255) cgTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccaga < 1:3755780‑M1/101‑12 (MQ=255) gTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagca > 1:7053622‑M1/1‑89 (MQ=255) gTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCATGACACCAAAGAACGAACTGGCCACAGCTAAGTTAGagaacaccagcc > 1:790628‑M1/1‑89 (MQ=255) gTGGGAGTTATCAATCTTAAACAGGTCCGACAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccaaca > 1:3826404‑M1/1‑89 (MQ=255) tGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcag < 1:9874588‑M1/101‑14 (MQ=255) gggAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcagg < 1:11351133‑M1/101‑15 (MQ=255) ggAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggc > 1:2470906‑M1/1‑86 (MQ=255) aGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACGAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaa < 1:14709729‑M1/101‑18 (MQ=255) gTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAATAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaa < 1:13978299‑M1/101‑19 (MQ=255) ttATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaa > 1:14420715‑M1/1‑82 (MQ=255) tATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaac < 1:15159156‑M1/101‑21 (MQ=255) aTCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaact < 1:7100781‑M1/101‑22 (MQ=255) aTCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaact < 1:1461566‑M1/101‑22 (MQ=255) tCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactc < 1:15412730‑M1/101‑23 (MQ=255) cAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcg > 1:9795351‑M1/1‑78 (MQ=255) aaTCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcga < 1:14257113‑M1/101‑25 (MQ=255) tCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgata > 1:12991474‑M1/1‑75 (MQ=255) cTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataa < 1:11482232‑M1/101‑28 (MQ=255) ttAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataat < 1:6276245‑M1/101‑29 (MQ=255) tAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatg > 1:1973166‑M1/1‑72 (MQ=255) tAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaaatcgataatg > 1:2701969‑M1/1‑72 (MQ=255) cAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgt > 1:8718357‑M1/1‑68 (MQ=255) cAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgt > 1:5232231‑M1/1‑68 (MQ=255) tCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctg < 1:3300619‑M1/101‑38 (MQ=255) gCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgttt > 1:14014089‑M1/1‑61 (MQ=255) cAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttgg > 1:12801704‑M1/1‑59 (MQ=255) aGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggt > 1:7312266‑M1/1‑58 (MQ=255) gATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtg < 1:14387783‑M1/101‑45 (MQ=255) aTAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgc > 1:7564785‑M1/1‑56 (MQ=255) aaTCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccg < 1:2360541‑M1/101‑48 (MQ=255) aaTCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccg > 1:2127029‑M1/1‑54 (MQ=255) aTCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccga < 1:9598557‑M1/101‑49 (MQ=255) cGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgagg < 1:12369123‑M1/101‑51 (MQ=255) gAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgagga > 1:2346921‑M1/1‑50 (MQ=255) acaacCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaac < 1:15085185‑M1/101‑54 (MQ=255) acaacCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaac < 1:11533803‑M1/101‑54 (MQ=255) caacCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacg > 1:1580952‑M1/1‑47 (MQ=255) aacCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacga < 1:9238416‑M1/101‑56 (MQ=255) aacCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacga > 1:14216583‑M1/1‑46 (MQ=255) ccccAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatt > 1:13271913‑M1/1‑44 (MQ=255) ccAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttc > 1:12902424‑M1/1‑42 (MQ=255) ccAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttc > 1:10762743‑M1/1‑42 (MQ=255) gCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcacc < 1:1755908‑M1/101‑63 (MQ=255) cGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcacca < 1:12138954‑M1/101‑64 (MQ=255) cGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcacca > 1:1109440‑M1/1‑38 (MQ=255) acacCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcga < 1:4756661‑M1/101‑68 (MQ=255) acacCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcga > 1:9118999‑M1/1‑34 (MQ=255) cacCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaa > 1:5739811‑M1/1‑33 (MQ=255) cacCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaa < 1:5444440‑M1/101‑69 (MQ=255) acCAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaat < 1:9013942‑M1/101‑70 (MQ=255) ccAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatc < 1:10328512‑M1/101‑71 (MQ=255) ccAAAGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatc < 1:14802166‑M1/101‑71 (MQ=255) aaaGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaa > 1:253184‑M1/1‑29 (MQ=255) aaaGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaa < 1:658115‑M1/101‑73 (MQ=255) aaaGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaa < 1:14093716‑M1/101‑73 (MQ=255) aaGAACGAACTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaac < 1:4662920‑M1/101‑74 (MQ=255) aacgaacTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgtt > 1:4887014‑M1/1‑25 (MQ=255) aacgaacTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgtt > 1:11655292‑M1/1‑25 (MQ=255) aacgaacTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgtt > 1:8517555‑M1/1‑25 (MQ=255) aacgaacTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgtt < 1:3605565‑M1/101‑77 (MQ=255) cgaacTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgc < 1:11842117‑M1/101‑79 (MQ=255) acTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgc < 1:7791646‑M1/101‑82 (MQ=255) acTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgc < 1:12499503‑M1/101‑82 (MQ=255) acTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgc > 1:12066650‑M1/1‑20 (MQ=255) acTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgc > 1:1169351‑M1/1‑20 (MQ=255) cTGGCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttccccagcgaatcaacgttgccgcc < 1:12282613‑M1/101‑83 (MQ=255) ggCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctg < 1:8150697‑M1/101‑85 (MQ=255) gCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctga > 1:10140419‑M1/1‑16 (MQ=255) gCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctga < 1:10910044‑M1/101‑86 (MQ=255) gCAACAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctga < 1:5001233‑M1/101‑86 (MQ=255) aaCAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgagg > 1:6163633‑M1/1‑14 (MQ=255) cAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggag > 1:1114093‑M1/1‑12 (MQ=255) cAGCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggag < 1:13457509‑M1/101‑90 (MQ=255) gCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagat > 1:9334425‑M1/1‑10 (MQ=255) gCTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggagccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagat < 1:894089‑M1/101‑92 (MQ=255) cTAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagata > 1:10517310‑M1/1‑9 (MQ=255) aaatgTTAGGGAAGGTGCGACCAAGCCCCTAATATGAGATCATGTTTGTCCCCCGGAGCCATAGAACAGGGTTCATCAAGAGTCATCAACTTACCTTCGcc < 1:10443196/97‑1 (MQ=11) tAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataa > 1:9478008‑M1/1‑8 (MQ=255) tAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataa > 1:1353342‑M1/1‑8 (MQ=255) tAAGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataa < 1:5471137‑M1/101‑94 (MQ=255) aaGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataat > 1:14858692‑M1/1‑7 (MQ=255) aaGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataat < 1:5979082‑M1/101‑95 (MQ=255) aGTTAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatc > 1:3942118‑M1/1‑6 (MQ=255) ttAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatcgc < 1:2897008‑M1/101‑98 (MQ=255) ttAGagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatcgc < 1:2166153‑M1/101‑98 (MQ=255) agagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaaggatttcaccagcgaatcaacgttgccgcctgaggagataatcgcct < 1:11979372‑M1/101‑100 (MQ=255) agagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatcgcct < 1:1685990‑M1/101‑100 (MQ=255) agagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatcgcct < 1:3060543‑M1/101‑100 (MQ=255) gagaacaccagcaggcaaaactcgataatgccgtgctgtttggtgccgaggaacgatttcaccagcgaatcaacgttgccgcctgaggagataatcgcctt < 1:11282657‑M1/101‑101 (MQ=255) | GAAACGCCCGCCGTGGGAGTTATCAATCTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGA > NC_007779/3746810‑3747010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |