Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,731,798 T→C 1.4% E344E (GAA→GAG clpB ← protein disaggregation chaperone

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077792,731,7980T→C 1.4% 4.9 0.0 ‑0.2361E344E (GAA→GAGclpBprotein disaggregation chaperone
Reads supporting (aligned to +/- strand):  new base (2/3):  ref base (151/205):  total (153/208)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.18e-01

Only 100 of 380 total aligned reads displayed.

GAGACAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTA  >  NC_007779/2731698‑2731898
                                                                                                    |                                                                                                    
 agaCAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCtt                                                                                                     <  1:9333757/101‑1 (MQ=255)
  gaCAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTc                                                                                                    <  1:15158179/101‑1 (MQ=255)
   aCAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCa                                                                                                   <  1:14075491/101‑1 (MQ=255)
   aCAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCa                                                                                                   >  1:11941654/1‑101 (MQ=255)
   aCAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCa                                                                                                   >  1:8727576/1‑101 (MQ=255)
    cAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCaa                                                                                                  >  1:6627537/1‑101 (MQ=255)
    cAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCaa                                                                                                  <  1:843830/101‑1 (MQ=255)
    cAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTAGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCaa                                                                                                  >  1:14507008/1‑101 (MQ=255)
    aaaCGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCCCGCAGAATCGCAATGGTATCTTCaa                                                                                                  <  1:97467/100‑1 (MQ=255)
      aCGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACa                                                                                                <  1:6453345/101‑1 (MQ=255)
        gTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGa                                                                                              >  1:14827638/1‑101 (MQ=255)
        gTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGa                                                                                              <  1:1503853/101‑1 (MQ=255)
          cgccgcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAg                                                                                            <  1:439894/101‑1 (MQ=255)
           gccgcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAgg                                                                                           >  1:11500649/1‑101 (MQ=255)
             cgcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCt                                                                                         >  1:4631407/1‑101 (MQ=255)
             cgcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCt                                                                                         >  1:13076796/1‑101 (MQ=255)
             cgcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCt                                                                                         >  1:4174111/1‑101 (MQ=255)
              gcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCCCGCAGAATCGCAATGGTACCTTCAACAGAAGGCTc                                                                                        <  1:2087644/101‑1 (MQ=255)
              gcTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTc                                                                                        >  1:2927524/1‑101 (MQ=255)
               cTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCg                                                                                       <  1:11572534/101‑1 (MQ=255)
                tGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCgg                                                                                      <  1:13401174/101‑1 (MQ=255)
                  caacaaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGca                                                                                    >  1:11662787/1‑101 (MQ=255)
                  caacaaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGca                                                                                    <  1:1229354/101‑1 (MQ=255)
                   aacaaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGcaa                                                                                   >  1:2680597/1‑101 (MQ=255)
                    acaaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGcaac                                                                                  >  1:14764292/1‑101 (MQ=255)
                    acaaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGcaac                                                                                  <  1:13486719/101‑1 (MQ=255)
                     caaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGcaaca                                                                                 >  1:12036061/1‑101 (MQ=255)
                     caaTTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGcaaca                                                                                 <  1:5929703/101‑1 (MQ=255)
                      caTTGCCTGGTCAGTAATTTGCACATCGTGGTGCAATTAGTAACTTTCTTTCAGGCCTCACAAAATCTCAATAGTATCTTCAACAGAAGGCTCGGcaacaa                                                                                <  1:94731/100‑1 (MQ=255)
                        ttGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCaacaaac                                                                              >  1:7917348/1‑101 (MQ=255)
                         tGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCaacaaaca                                                                             <  1:11113270/101‑1 (MQ=255)
                           ccGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACt                                                                           >  1:3098476/1‑101 (MQ=255)
                            cGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACtt                                                                          >  1:5486789/1‑101 (MQ=255)
                            cGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACtt                                                                          <  1:8213919/101‑1 (MQ=255)
                               gTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCt                                                                       <  1:14599632/101‑1 (MQ=255)
                                 gaGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGAAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTgg                                                                     >  1:10151440/2‑101 (MQ=255)
                                  aGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGa                                                                    >  1:8567796/1‑101 (MQ=255)
                                  aGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGa                                                                    <  1:5114163/101‑1 (MQ=255)
                                    tAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGaaa                                                                  <  1:12668743/101‑1 (MQ=255)
                                     aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                 <  1:13221454/101‑1 (MQ=255)
                                     aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                 >  1:8891802/1‑101 (MQ=255)
                                      aTTTGCACATGGTGGTGCAATCCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacg                                                                <  1:641777/101‑1 (MQ=255)
                                       tttGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacga                                                               >  1:10381459/1‑101 (MQ=255)
                                        ttGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgac                                                              <  1:9641648/101‑1 (MQ=255)
                                        ttGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgac                                                              >  1:11819765/1‑101 (MQ=255)
                                         tccacaTGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgacg                                                             <  1:13820827/99‑1 (MQ=255)
                                         tGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgacg                                                             <  1:3456425/101‑1 (MQ=255)
                                          gCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGt                                                            >  1:6823418/1‑101 (MQ=255)
                                          gCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGt                                                            >  1:3392817/1‑101 (MQ=255)
                                          gCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGt                                                            >  1:7279330/1‑101 (MQ=255)
                                            acaTGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTc                                                          >  1:12994221/1‑101 (MQ=255)
                                              aTGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCa                                                        <  1:5203367/101‑1 (MQ=255)
                                                ggtggtGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAgc                                                      <  1:5670725/101‑1 (MQ=255)
                                                   ggtgCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCgca                                                   >  1:10020228/1‑101 (MQ=255)
                                                   ggtgCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCgca                                                   <  1:10497182/101‑1 (MQ=255)
                                                       cAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCAt                                               >  1:428574/1‑101 (MQ=255)
                                                       cAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCAt                                               >  1:7988459/1‑101 (MQ=255)
                                                         aTTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCt                                             <  1:7196497/101‑1 (MQ=255)
                                                          ttCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCtt                                            >  1:12480157/1‑101 (MQ=255)
                                                           tCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttt                                           <  1:2287501/101‑1 (MQ=255)
                                                           tCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttt                                           <  1:4026545/101‑1 (MQ=255)
                                                             gTAGCGTTCCTTCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCcttct                                         >  1:7467777/1‑99 (MQ=255)
                                                             gTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttttt                                         <  1:7031195/101‑1 (MQ=255)
                                                             gTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttttt                                         <  1:1887962/101‑1 (MQ=255)
                                                               aaCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCa                                       <  1:7611234/101‑1 (MQ=255)
                                                                aCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCaa                                      >  1:12157100/1‑101 (MQ=255)
                                                                 cGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGTCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAAt                                     <  1:9536794/101‑1 (MQ=255)
                                                                  gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                    <  1:1325794/101‑1 (MQ=255)
                                                                   ttCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGt                                   <  1:4474511/101‑1 (MQ=255)
                                                                         cAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGc                             >  1:5303053/1‑101 (MQ=255)
                                                                         cAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGc                             >  1:11192744/1‑101 (MQ=255)
                                                                          aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                            <  1:14300954/101‑1 (MQ=255)
                                                                          aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCAACCCCAGCTTTTTTTTAATGTaactgcga                           >  1:14025980/1‑94 (MQ=255)
                                                                           ggCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGa                           <  1:9040024/101‑1 (MQ=255)
                                                                            gCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGat                          >  1:13643295/1‑101 (MQ=255)
                                                                             ccACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGata                         >  1:4211618/1‑101 (MQ=255)
                                                                              cACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGatat                        <  1:9922694/101‑1 (MQ=255)
                                                                              cACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGatat                        >  1:14974230/1‑101 (MQ=255)
                                                                              cACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGatat                        <  1:1980986/101‑1 (MQ=255)
                                                                                cGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTc                      <  1:3289684/101‑1 (MQ=255)
                                                                                cGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTc                      <  1:10654989/101‑1 (MQ=255)
                                                                                  cAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGt                    >  1:6694580/1‑101 (MQ=255)
                                                                                  cAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGt                    <  1:10896298/101‑1 (MQ=255)
                                                                                   aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                   >  1:12785548/1‑101 (MQ=255)
                                                                                   aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                   <  1:7795300/101‑1 (MQ=255)
                                                                                   aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                   >  1:12376316/1‑101 (MQ=255)
                                                                                   aGAATCGCAATGGTAGCTTCAACAGAAGGCTCGGCAACAAACTCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                   <  1:15441091/101‑1 (MQ=255)
                                                                                    gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                  <  1:12857817/101‑1 (MQ=255)
                                                                                    gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                  <  1:2476042/101‑1 (MQ=255)
                                                                                     aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                 <  1:2883036/101‑1 (MQ=255)
                                                                                     aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                 >  1:4777462/1‑101 (MQ=255)
                                                                                      aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                <  1:1754878/101‑1 (MQ=255)
                                                                                         gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt             <  1:3608420/101‑1 (MQ=255)
                                                                                         gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTCCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt             <  1:11317184/101‑1 (MQ=255)
                                                                                          cAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc            <  1:1526689/101‑1 (MQ=255)
                                                                                          cAATGGTATCTTCAACAGAAGGCGCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc            <  1:6281613/101‑1 (MQ=255)
                                                                                             tGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTg         <  1:4930520/101‑1 (MQ=255)
                                                                                                tATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCa      <  1:12601206/101‑1 (MQ=255)
                                                                                                 aTCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCAc     <  1:2735378/101‑1 (MQ=255)
                                                                                                   cTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAAGGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCt   >  1:14154919/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GAGACAACGTCGCCGCTGCAACAATTGCCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTA  >  NC_007779/2731698‑2731898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.