Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,731,825 T→C 1.4% K335K (AAA→AAG clpB ← protein disaggregation chaperone

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077792,731,8250T→C 1.4% 4.7 0.0 ‑0.2357K335K (AAA→AAGclpBprotein disaggregation chaperone
Reads supporting (aligned to +/- strand):  new base (2/3):  ref base (152/200):  total (154/203)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.24e-01

Only 100 of 380 total aligned reads displayed.

CCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCG  >  NC_007779/2731725‑2731925
                                                                                                    |                                                                                                    
ccGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACt                                                                                                      >  1:3098476/1‑101 (MQ=255)
ccGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACt                                                                                                      >  1:5178466/1‑101 (MQ=255)
 cGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACtt                                                                                                     >  1:14864089/1‑101 (MQ=255)
 cGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACtt                                                                                                     >  1:10458321/1‑101 (MQ=255)
 cGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACtt                                                                                                     <  1:12386774/101‑1 (MQ=255)
   ggTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTc                                                                                                   <  1:5402048/101‑1 (MQ=255)
     tCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTg                                                                                                 >  1:1227905/1‑101 (MQ=255)
      cAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTgg                                                                                                <  1:15103118/101‑1 (MQ=255)
      cAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTgg                                                                                                >  1:12598080/1‑101 (MQ=255)
       aGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGa                                                                                               <  1:1854841/101‑1 (MQ=255)
        gTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACTCTTTCTGGaa                                                                                              <  1:4267555/101‑1 (MQ=255)
        gTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGaa                                                                                              <  1:5029247/101‑1 (MQ=255)
         tAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGaaa                                                                                             <  1:12668743/101‑1 (MQ=255)
          aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCCATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                                            <  1:14692533/101‑1 (MQ=255)
          aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                                            >  1:8931530/1‑101 (MQ=255)
          aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                                            >  1:13474943/1‑101 (MQ=255)
          aaTTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAac                                                                                            >  1:462015/1‑101 (MQ=255)
             ttGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgac                                                                                         >  1:11819765/1‑101 (MQ=255)
             ttGCACATGGTGGTGCAATTCGTAACATTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAacgac                                                                                         <  1:13356493/101‑1 (MQ=255)
               gCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGt                                                                                       <  1:9491946/101‑1 (MQ=255)
               gCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGt                                                                                       >  1:6823418/1‑101 (MQ=255)
                  caTGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTca                                                                                    >  1:696807/1‑100 (MQ=255)
                   aTGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCa                                                                                   >  1:1543591/1‑101 (MQ=255)
                    tggtggTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAg                                                                                  <  1:11564479/101‑1 (MQ=255)
                     ggtggtGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTAAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAgc                                                                                 <  1:11987242/101‑1 (MQ=255)
                        ggtgCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCgca                                                                              <  1:6441916/101‑1 (MQ=255)
                        ggtgCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCgca                                                                              >  1:10020228/1‑101 (MQ=255)
                         gtgCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCgcag                                                                             <  1:10116558/101‑1 (MQ=255)
                            gacctCGTAGCGTTCCTTCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCAt                                                                          >  1:14181171/5‑101 (MQ=255)
                            cAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCAt                                                                          >  1:342374/1‑101 (MQ=255)
                            cAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCAt                                                                          <  1:1955964/101‑1 (MQ=255)
                             aaTTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATc                                                                         >  1:15018175/1‑101 (MQ=255)
                               ttCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCtt                                                                       >  1:12480157/1‑101 (MQ=255)
                                tCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttt                                                                      <  1:4026545/101‑1 (MQ=255)
                                  gTAGCGTTCCTTCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCcttct                                                                    >  1:7467777/1‑99 (MQ=255)
                                  gTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttttt                                                                    >  1:8165600/1‑101 (MQ=255)
                                   tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGCCGTTCCAGCGCAGCATCTTTTTc                                                                   >  1:6658440/1‑101 (MQ=255)
                                   tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTc                                                                   <  1:10534568/101‑1 (MQ=255)
                                   tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTc                                                                   <  1:294912/101‑1 (MQ=255)
                                    aaCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCa                                                                  <  1:7611234/101‑1 (MQ=255)
                                      cGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAAt                                                                >  1:13150566/1‑101 (MQ=255)
                                      cGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAAt                                                                <  1:8629449/101‑1 (MQ=255)
                                       gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                                               >  1:11440592/1‑101 (MQ=255)
                                       gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                                               <  1:5688788/101‑1 (MQ=255)
                                       gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                                               <  1:1325794/101‑1 (MQ=255)
                                        ttCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAACGGCGGTCCAACGCAGCATCTTTTTTaaatga                                                             >  1:10832352/1‑97 (MQ=255)
                                         tccttCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGTAAACGACGCTCCAGCGCAGCATCCTTCTCGATGTa                                                             <  1:2058642/98‑1 (MQ=255)
                                         tccttCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCCTTCTCGATGTa                                                             <  1:2677243/98‑1 (MQ=255)
                                           tttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACt                                                           >  1:7241661/1‑101 (MQ=255)
                                            ttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTg                                                          <  1:14063918/101‑1 (MQ=255)
                                              cAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGc                                                        <  1:9335203/101‑1 (MQ=255)
                                              cAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGc                                                        >  1:11192744/1‑101 (MQ=255)
                                               aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                       <  1:6294773/101‑1 (MQ=255)
                                               aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                       <  1:14300954/101‑1 (MQ=255)
                                               aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                       >  1:14590228/1‑101 (MQ=255)
                                               aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                       >  1:4445509/1‑101 (MQ=255)
                                               aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                       >  1:3591498/1‑101 (MQ=255)
                                                ggCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGa                                                      <  1:9040024/101‑1 (MQ=255)
                                                 gCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGat                                                     >  1:13643295/1‑101 (MQ=255)
                                                 gCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGat                                                     <  1:9739514/101‑1 (MQ=255)
                                                  ccACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGata                                                    >  1:7149759/1‑101 (MQ=255)
                                                   cACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGatat                                                   <  1:9922694/101‑1 (MQ=255)
                                                        aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                                              <  1:10903706/101‑1 (MQ=255)
                                                        aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                                              <  1:7795300/101‑1 (MQ=255)
                                                        aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                                              <  1:6218669/101‑1 (MQ=255)
                                                         gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                                             >  1:1644003/1‑101 (MQ=255)
                                                         gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                                             <  1:2476042/101‑1 (MQ=255)
                                                         gAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCa                                             <  1:12857817/101‑1 (MQ=255)
                                                          aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                                            >  1:4777462/1‑101 (MQ=255)
                                                          aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                                            <  1:4907552/101‑1 (MQ=255)
                                                          aaTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCaa                                            <  1:2883036/101‑1 (MQ=255)
                                                           aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                                           <  1:13770994/101‑1 (MQ=255)
                                                           aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                                           <  1:8283537/101‑1 (MQ=255)
                                                            tCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGc                                          <  1:15328765/101‑1 (MQ=255)
                                                            tCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGc                                          <  1:9588527/101‑1 (MQ=255)
                                                            tCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGc                                          <  1:4189449/101‑1 (MQ=255)
                                                             cGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcg                                         >  1:12829459/1‑101 (MQ=255)
                                                              gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt                                        >  1:13052963/1‑101 (MQ=255)
                                                               cAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc                                       >  1:2353656/1‑101 (MQ=255)
                                                                aaTGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtcg                                      <  1:12350556/101‑1 (MQ=255)
                                                                aaTGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtcg                                      >  1:7318603/1‑101 (MQ=255)
                                                                          tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                            >  1:10273398/1‑101 (MQ=255)
                                                                          tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                            >  1:15224350/1‑101 (MQ=255)
                                                                             aCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCa                         <  1:8078130/101‑1 (MQ=255)
                                                                             aCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCa                         >  1:5986305/1‑101 (MQ=255)
                                                                              cAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAg                        >  1:3357676/1‑101 (MQ=255)
                                                                               aGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGt                       >  1:432075/1‑101 (MQ=255)
                                                                                gAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTg                      <  1:5555274/101‑1 (MQ=255)
                                                                                  aGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCa                    <  1:1496539/101‑1 (MQ=255)
                                                                                     cTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAtt                 <  1:13857145/101‑1 (MQ=255)
                                                                                     cTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAtt                 >  1:2740037/1‑101 (MQ=255)
                                                                                       cGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTca               <  1:10710916/101‑1 (MQ=255)
                                                                                        ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac              >  1:7694602/1‑101 (MQ=255)
                                                                                          caacaaACACTTTCTGGAAACGACGTTCCAGCGCAGCATCATTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcacca            <  1:11287248/101‑1 (MQ=255)
                                                                                           aacaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcaccac           <  1:14454233/101‑1 (MQ=255)
                                                                                             caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc         >  1:12093793/1‑101 (MQ=255)
                                                                                             caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc         >  1:8479367/1‑101 (MQ=255)
                                                                                             caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc         >  1:2151305/1‑101 (MQ=255)
                                                                                               aacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACgcgc       <  1:3752814/101‑1 (MQ=255)
                                                                                                  acTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAg    >  1:3162532/1‑101 (MQ=255)
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CCGGGTCAGTAATTTGCACATGGTGGTGCAATTCGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCG  >  NC_007779/2731725‑2731925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.