| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,864,993 | Δ1 bp | 6.8% | coding (509/996 nt) | gapA → | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,864,993 | 0 | A→. | 6.8% | 64.5 ‑1.4 ‑0.4 | 293 | coding (509/996 nt) | gapA | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Reads supporting (aligned to +/- strand): new base (14/6): ref base (147/126): total (161/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.44e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.43e-01 | ||||||||||
Only 100 of 301 total aligned reads displayed.
GACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAAC > NC_007779/1864893‑1865093 | gACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGa > 1:9740338/1‑101 (MQ=255) aCAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGaa > 1:5176444/1‑101 (MQ=255) aCAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGaa < 1:11423663/101‑1 (MQ=255) aaaTATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAgg > 1:8922379/1‑101 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTc < 1:9052452/101‑1 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTc > 1:7421601/1‑101 (MQ=255) tGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtga > 1:10994743/1‑101 (MQ=255) cTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgatg > 1:3415986/1‑101 (MQ=255) cTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgatg < 1:5503800/101‑1 (MQ=255) gCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGacc > 1:12217596/1‑101 (MQ=255) gCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGacc > 1:10807035/1‑101 (MQ=255) cacaaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccac > 1:1036717/5‑101 (MQ=255) cAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGaccac < 1:12413349/101‑1 (MQ=255) acaaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccacc > 1:11597765/4‑101 (MQ=255) acaaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccacc > 1:978503/4‑101 (MQ=255) acaaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccacc > 1:11231417/4‑101 (MQ=255) aGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGaccacc > 1:11816824/1‑101 (MQ=255) gACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGt < 1:7102506/101‑1 (MQ=255) gACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGt < 1:1067684/101‑1 (MQ=255) aaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccaccat > 1:1764311/2‑99 (MQ=255) aCATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGtt < 1:13982603/101‑1 (MQ=255) aCATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGtt > 1:5337303/1‑101 (MQ=255) aCATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCACC‑ATCGAAGGTCTGATGACCACCGtt < 1:10321092/101‑1 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:6990047/1‑101 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:11456887/1‑101 (MQ=255) cGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACg > 1:12473829/1‑101 (MQ=255) gTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGc < 1:10566727/101‑1 (MQ=255) tttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGct > 1:7815213/1‑101 (MQ=255) ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGcta < 1:160830/101‑1 (MQ=255) tcgaaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcata < 1:6273002/98‑4 (MQ=255) tcgaaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcata < 1:9623912/98‑4 (MQ=255) tCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctac < 1:6195852/101‑1 (MQ=255) tCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctac < 1:3524093/101‑1 (MQ=255) tCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctac > 1:8693747/1‑101 (MQ=255) tCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTCCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctac < 1:13157477/101‑1 (MQ=255) cgaaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatac > 1:3143032/3‑97 (MQ=255) aCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTAcc < 1:14319092/101‑1 (MQ=255) cTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacaccggt > 1:10391050/1‑91 (MQ=255) cTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacaccggt > 1:12953486/1‑91 (MQ=255) cTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCt < 1:6886760/101‑1 (MQ=255) cTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCt < 1:2526508/101‑1 (MQ=255) tCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTAc < 1:12786865/101‑1 (MQ=255) ccTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACt > 1:13785046/1‑101 (MQ=255) gCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAg > 1:4068578/1‑101 (MQ=255) caccacCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGa < 1:12835031/101‑1 (MQ=255) ccaccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGaaa < 1:8476506/101‑1 (MQ=255) ccaccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGaaa > 1:13873240/1‑101 (MQ=255) caccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGaaaa > 1:11134752/1‑101 (MQ=255) aCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGtt < 1:7919550/101‑1 (MQ=255) aCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGtt < 1:12633536/101‑1 (MQ=255) cTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTg < 1:13169001/101‑1 (MQ=255) cTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATgg > 1:3831869/1‑101 (MQ=255) cTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATgg < 1:1196315/101‑1 (MQ=255) cTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGCTGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCg > 1:7258351/1‑101 (MQ=255) tCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGt > 1:1529519/1‑101 (MQ=255) tGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTcac > 1:8562291/1‑101 (MQ=255) ggCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTcaca > 1:1417275/1‑101 (MQ=255) cTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCGCGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACaaa > 1:11087140/1‑101 (MQ=255) cTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACaaa > 1:6698586/1‑101 (MQ=255) cTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTAGATGGCCCGTCTCACaaa < 1:13250663/101‑1 (MQ=255) tAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAg < 1:6417387/101‑1 (MQ=255) tAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAg > 1:503398/1‑101 (MQ=255) tAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAg > 1:2360172/1‑101 (MQ=255) tATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgc > 1:5985503/1‑101 (MQ=255) aTCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGtcg > 1:2619705/1‑101 (MQ=255) aTCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcg < 1:11344333/101‑1 (MQ=255) tCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcgc > 1:8237524/1‑101 (MQ=255) tCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcgc > 1:6534844/1‑101 (MQ=255) cAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGcgcg < 1:2254227/101‑1 (MQ=255) aaCGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcgg > 1:4816949/1‑101 (MQ=255) aaCGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcgg > 1:7716930/1‑101 (MQ=255) aCGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcggc > 1:9366417/1‑101 (MQ=255) cGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcggcg < 1:13405276/101‑1 (MQ=255) aTAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCggcggc > 1:3284695/1‑101 (MQ=255) tAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGcc < 1:7517499/101‑1 (MQ=255) tAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGcc < 1:7134823/101‑1 (MQ=255) aaCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcg < 1:2064004/101‑1 (MQ=255) aaCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcg < 1:6365818/101‑1 (MQ=255) aCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgc < 1:604704/101‑1 (MQ=255) aCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgc < 1:11711280/101‑1 (MQ=255) cTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgcg > 1:13624863/1‑101 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCATGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTCGCGCGGCGGCCgcgg > 1:4951685/1‑101 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCCCAAAGACTTGCGCGGCGGGCgcgg > 1:10054048/1‑101 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg < 1:583786/101‑1 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg < 1:8289599/101‑1 (MQ=255) cGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggcg < 1:8799405/101‑1 (MQ=255) cGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggcg < 1:4522938/101‑1 (MQ=255) catc‑atCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCtt < 1:2861815/101‑1 (MQ=255) catc‑atCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCtt > 1:9293838/1‑101 (MQ=255) catc‑atCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCtt < 1:10081016/101‑1 (MQ=255) atc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc > 1:11912149/1‑101 (MQ=255) atc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc > 1:13609569/1‑101 (MQ=255) atc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc > 1:1966696/1‑101 (MQ=255) tc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTcc < 1:12017951/101‑1 (MQ=255) c‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc > 1:8721490/1‑101 (MQ=255) atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCa > 1:13100493/1‑101 (MQ=255) cGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGa > 1:463231/1‑101 (MQ=255) cGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGa > 1:9180872/1‑101 (MQ=255) cGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGa > 1:9526083/1‑101 (MQ=255) aaGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAAc > 1:3357028/1‑101 (MQ=255) | GACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAAC > NC_007779/1864893‑1865093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |