| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_007779 | 2,865,278 | +TTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCTTCGATATTCAGCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGC | 51.1% | coding (813/876 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 2865229 = | 120 (0.550) | 67 (0.580) | 42/96 | NT | 51.1% | coding (862/876 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| ? | NC_007779 | = 2865278 | 120 (0.550) | coding (813/876 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor | |||||
GCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_007779/2865269‑2865229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCG < NC_007779/2865278‑2865235 |||||||||||||||||||||||||||||||||||||||||| GCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAAT < 1:11085037/101‑1GCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAAT > 1:9484971/1‑101 CGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATC < 1:910059/101‑1 CGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATC < 1:146057/101‑1 GCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCC < 1:13991512/101‑1 GCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCC > 1:6100442/1‑101 GCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCC < 1:1430968/101‑1 GCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCC < 1:7466960/101‑1 GCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCC < 1:11866104/101‑1 CGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCT < 1:7649676/101‑1 CGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCT > 1:7170769/1‑101 CGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCT < 1:3588972/101‑1 GAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTG > 1:2123859/1‑101 GAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTG > 1:977028/1‑101 GAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTG < 1:14191684/101‑1 GAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTG < 1:5586860/101‑1 AAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGC < 1:1969249/101‑1 AAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGC > 1:4537022/1‑101 AAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGC < 1:5066939/101‑1 AAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGC > 1:5922824/1‑101 AATCCTGCAAACGCATGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCA > 1:3129687/1‑101 AATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCA < 1:6651142/101‑1 ATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAA < 1:10673766/101‑1 TCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAA > 1:9483477/1‑101 CTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACG > 1:12034734/1‑101 TGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGC > 1:6439403/1‑101 TGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGC < 1:2447985/101‑1 GCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCA < 1:3653091/101‑1 GCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCA > 1:13774711/1‑101 CAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAG < 1:568200/101‑1 AAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGG > 1:6068840/1‑101 AAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGG > 1:3677536/1‑101 AACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGG < 1:11371186/101‑1 AACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGG < 1:11581937/101‑1 AACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGG < 1:11767759/101‑1 AACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGG > 1:4766632/1‑101 ACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGG < 1:6852677/101‑1 ACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGG < 1:9011809/101‑1 CGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGC < 1:2157649/101‑1 CGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGC < 1:1683670/101‑1 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT < 1:4689353/101‑1 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT > 1:13674868/1‑101 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT > 1:8142755/1‑101 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT > 1:13214737/1‑101 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT > 1:1099637/1‑101 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT < 1:7316658/101‑1 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT > 1:7225611/1‑101 GCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCT < 1:6519295/101‑1 CAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTG < 1:14239252/101‑1 CAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTG > 1:5546596/1‑101 CAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTG < 1:5981882/101‑1 CAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTG > 1:12776579/1‑101 AGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGA > 1:11971581/1‑101 AGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGA < 1:9150558/101‑1 GGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAA < 1:12125827/101‑1 GGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAA < 1:14306212/101‑1 GGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAA > 1:9975226/1‑101 GGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAAT < 1:12986674/101‑1 GGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAAT < 1:13116358/101‑1 GGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAAT > 1:9029663/1‑101 GGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAAT > 1:4676487/1‑101 GGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATA < 1:1500658/101‑1 GCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATAT < 1:7362064/101‑1 GCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATAT > 1:8788537/1‑101 CTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATC > 1:1216369/1‑101 TGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCG > 1:12686142/1‑101 TGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCG < 1:13241370/101‑1 |||||||||||||||||||||||||||||||||||||||||| GCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_007779/2865269‑2865229‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCG < NC_007779/2865278‑2865235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |