New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)87 (0.400) 63/178 NT 46.8% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 100 (0.460)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/3185998‑3186081
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512753‑3512853
                                                                                                                                                                                         
ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCA                                                                                      <  1:12925636/101‑1
  CGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAG                                                                                    >  1:5303332/1‑101
   GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGG                                                                                   >  1:13559132/1‑101
   GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGG                                                                                   >  1:13199029/1‑101
   GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGG                                                                                   <  1:2802284/101‑1
   GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGG                                                                                   <  1:7009785/101‑1
   GCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGG                                                                                   >  1:2293089/1‑101
     TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGTAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGC                                                                                 >  1:7188574/1‑101
      CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCA                                                                                <  1:647429/101‑1
       GCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCAT                                                                               >  1:2652730/1‑101
       GCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCAT                                                                               <  1:3416522/101‑1
         CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAA                                                                             <  1:12250207/101‑1
         CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAA                                                                             >  1:7848217/1‑101
          ACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAA                                                                            <  1:10329311/101‑1
           CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAAC                                                                           <  1:843351/101‑1
           CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAAC                                                                           <  1:7603373/101‑1
            GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACG                                                                          <  1:13809833/101‑1
            GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTATGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACG                                                                          <  1:14033920/101‑1
             GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGG                                                                         >  1:3596889/1‑101
             GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGG                                                                         <  1:12990754/101‑1
             GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGG                                                                         <  1:1387211/101‑1
               AATATCTGCGGCAGCGTGCTTGTAATGGGTTAAGTGATAACAGATTTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGAT                                                                       <  1:6977595/101‑1
               AATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGAT                                                                       <  1:6035561/101‑1
               AATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGAT                                                                       <  1:2485817/101‑1
                ATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATT                                                                      <  1:2595261/101‑1
                ATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATT                                                                      <  1:5884709/101‑1
                ATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATT                                                                      <  1:127825/101‑1
                  ATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGG                                                                    <  1:5305659/101‑1
                  ATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGG                                                                    >  1:624896/1‑101
                   TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGC                                                                   >  1:5477688/1‑101
                    CTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCT                                                                  >  1:9893087/1‑101
                     TGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTG                                                                 >  1:203711/1‑101
                      GCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGT                                                                >  1:1624289/1‑101
                        GGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTAT                                                              >  1:8988358/1‑101
                        GGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTAT                                                              <  1:7037581/101‑1
                        GGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTAT                                                              >  1:4465022/1‑101
                         GCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATA                                                             <  1:109219/101‑1
                          CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAG                                                            <  1:8960600/101‑1
                           AGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGC                                                           <  1:8428323/101‑1
                              GGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGG                                                        <  1:4639580/101‑1
                              GGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGG                                                        >  1:9121862/1‑101
                              GGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGG                                                        >  1:397790/1‑101
                                GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTC                                                      <  1:11146658/101‑1
                                  TTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCC                                                    >  1:1582074/1‑101
                                    GTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGA                                                  >  1:1655984/1‑101
                                      AATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAG                                                <  1:3489230/101‑1
                                          GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAT                                            <  1:7775194/101‑1
                                          GGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAT                                            <  1:356685/101‑1
                                            TTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGC                                          >  1:1370744/1‑101
                                             TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCC                                         >  1:787973/1‑101
                                               AGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGC                                       >  1:6767172/1‑101
                                                GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCT                                      <  1:9752387/101‑1
                                                GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCT                                      >  1:1529849/1‑101
                                                  GATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGT                                    <  1:13279387/101‑1
                                                   ATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAATAGATGCCGCTGTG                                   >  1:9078683/1‑101
                                                   ATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTG                                   >  1:7812064/1‑101
                                                      ACAGATGTCTGGAAATATAGGGGCAAATCCAATCATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCA                                >  1:9480253/1‑101
                                                       CAGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAC                               <  1:997376/101‑1
                                                        AGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACT                              >  1:4744014/1‑101
                                                        AGATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACT                              >  1:959744/1‑101
                                                         GATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTA                             >  1:683101/1‑101
                                                         GATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTA                             >  1:7488981/1‑101
                                                          ATGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAC                            >  1:2336358/1‑101
                                                           TGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACC                           >  1:1199024/1‑101
                                                           TGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACC                           <  1:9446655/101‑1
                                                           TGTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACC                           >  1:9553749/1‑101
                                                            GTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGTCGCTGTGTCACTACCG                          >  1:9298472/1‑101
                                                            GTCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCG                          >  1:6691214/1‑101
                                                             TCTGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGC                         <  1:11181184/101‑1
                                                               TGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCT                       <  1:10757091/101‑1
                                                               TGGAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCT                       >  1:8898308/1‑101
                                                                 GAAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGC                     <  1:10004212/101‑1
                                                                  AAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCA                    >  1:11494105/1‑101
                                                                  AAATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCA                    <  1:2454515/101‑1
                                                                   AATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAA                   <  1:10701865/101‑1
                                                                   AATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAA                   >  1:9763418/1‑101
                                                                   AATATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGCCTGTATAGCCGGTCCCGAAGAGATTCCGCTGTGTCACTACCGCCTGCAg                   >  1:6047723/1‑100
                                                                      ATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGC                >  1:9298822/1‑101
                                                                      ATAGGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGC                >  1:13828314/1‑101
                                                                         GGGGCAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTAT             >  1:11325432/1‑101
                                                                             CAAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTC         >  1:1334044/1‑101
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCA        >  1:11478335/1‑101
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCA        <  1:13521897/101‑1
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCA        <  1:210861/101‑1
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCA        >  1:3033150/1‑101
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCA        >  1:8827142/1‑101
                                                                              AAATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTACAAGGCTATGTTCA        <  1:5593649/101‑1
                                                                               AATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAG       >  1:4693711/1‑101
                                                                                ATCCAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGG      <  1:3638835/101‑1
                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAATGCTATGTTCAGGCGCT  <  1:9596588/101‑1
                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  <  1:11529057/101‑1
                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  <  1:11409192/101‑1
                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  <  1:2466454/101‑1
                                                                                                                                                                                         
ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/3185998‑3186081
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512753‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.